Protein–RNA interactions for Protein: A0A075B5V0

Ighv1-26, Immunoglobulin heavy variable 1-26 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-26A0A075B5V0 Gm25239-201ENSMUST00000174915 86 ntBASIC29.73■■■□□ 2.35
Ighv1-26A0A075B5V0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Ighv1-26A0A075B5V0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Ighv1-26A0A075B5V0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ighv1-26A0A075B5V0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Ighv1-26A0A075B5V0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ighv1-26A0A075B5V0 Gm15042-201ENSMUST00000120212 883 ntBASIC26.19■■□□□ 1.78
Ighv1-26A0A075B5V0 Psd-208ENSMUST00000224556 2034 ntBASIC25.8■■□□□ 1.72
Ighv1-26A0A075B5V0 Gm24109-201ENSMUST00000175489 103 ntBASIC25.63■■□□□ 1.69
Ighv1-26A0A075B5V0 Gm15045-201ENSMUST00000117359 883 ntBASIC25.58■■□□□ 1.69
Ighv1-26A0A075B5V0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ighv1-26A0A075B5V0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ighv1-26A0A075B5V0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ighv1-26A0A075B5V0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ighv1-26A0A075B5V0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ighv1-26A0A075B5V0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Ighv1-26A0A075B5V0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ighv1-26A0A075B5V0 Gm23366-201ENSMUST00000175022 89 ntBASIC24.91■■□□□ 1.58
Ighv1-26A0A075B5V0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Ighv1-26A0A075B5V0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ighv1-26A0A075B5V0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ighv1-26A0A075B5V0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ighv1-26A0A075B5V0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ighv1-26A0A075B5V0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.54■■□□□ 1.52
Ighv1-26A0A075B5V0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ighv1-26A0A075B5V0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ighv1-26A0A075B5V0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ighv1-26A0A075B5V0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ighv1-26A0A075B5V0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ighv1-26A0A075B5V0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ighv1-26A0A075B5V0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Ighv1-26A0A075B5V0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ighv1-26A0A075B5V0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Ighv1-26A0A075B5V0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Ighv1-26A0A075B5V0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ighv1-26A0A075B5V0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.02■■□□□ 1.44
Ighv1-26A0A075B5V0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ighv1-26A0A075B5V0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.98■■□□□ 1.43
Ighv1-26A0A075B5V0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Ighv1-26A0A075B5V0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ighv1-26A0A075B5V0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ighv1-26A0A075B5V0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.73■■□□□ 1.39
Ighv1-26A0A075B5V0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ighv1-26A0A075B5V0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.63■■□□□ 1.37
Ighv1-26A0A075B5V0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.63■■□□□ 1.37
Ighv1-26A0A075B5V0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.55■■□□□ 1.36
Ighv1-26A0A075B5V0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Ighv1-26A0A075B5V0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ighv1-26A0A075B5V0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ighv1-26A0A075B5V0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ighv1-26A0A075B5V0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.44■■□□□ 1.34
Ighv1-26A0A075B5V0 Gm25238-201ENSMUST00000174914 89 ntBASIC23.38■■□□□ 1.33
Ighv1-26A0A075B5V0 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.32■■□□□ 1.32
Ighv1-26A0A075B5V0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ighv1-26A0A075B5V0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ighv1-26A0A075B5V0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.24■■□□□ 1.31
Ighv1-26A0A075B5V0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ighv1-26A0A075B5V0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ighv1-26A0A075B5V0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ighv1-26A0A075B5V0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.13■■□□□ 1.29
Ighv1-26A0A075B5V0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ighv1-26A0A075B5V0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ighv1-26A0A075B5V0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ighv1-26A0A075B5V0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
Ighv1-26A0A075B5V0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.99■■□□□ 1.27
Ighv1-26A0A075B5V0 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.99■■□□□ 1.27
Ighv1-26A0A075B5V0 Gm27325-201ENSMUST00000175467 74 ntBASIC22.97■■□□□ 1.27
Ighv1-26A0A075B5V0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ighv1-26A0A075B5V0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ighv1-26A0A075B5V0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ighv1-26A0A075B5V0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Ighv1-26A0A075B5V0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Ighv1-26A0A075B5V0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.77■■□□□ 1.24
Ighv1-26A0A075B5V0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.77■■□□□ 1.24
Ighv1-26A0A075B5V0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.77■■□□□ 1.23
Ighv1-26A0A075B5V0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ighv1-26A0A075B5V0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ighv1-26A0A075B5V0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ighv1-26A0A075B5V0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.72■■□□□ 1.23
Ighv1-26A0A075B5V0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
Ighv1-26A0A075B5V0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ighv1-26A0A075B5V0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ighv1-26A0A075B5V0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.64■■□□□ 1.21
Ighv1-26A0A075B5V0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
Ighv1-26A0A075B5V0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
Ighv1-26A0A075B5V0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ighv1-26A0A075B5V0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ighv1-26A0A075B5V0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Ighv1-26A0A075B5V0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Ighv1-26A0A075B5V0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Ighv1-26A0A075B5V0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ighv1-26A0A075B5V0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ighv1-26A0A075B5V0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ighv1-26A0A075B5V0 Rab21-202ENSMUST00000218831 843 ntBASIC22.46■■□□□ 1.19
Ighv1-26A0A075B5V0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ighv1-26A0A075B5V0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ighv1-26A0A075B5V0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ighv1-26A0A075B5V0 Gm25262-201ENSMUST00000174934 133 ntBASIC22.39■■□□□ 1.17
Ighv1-26A0A075B5V0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.37■■□□□ 1.17
Ighv1-26A0A075B5V0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms