RNA–Protein interactions for RNA: ENSMUST00000115658.5

Pcdha11-201, Transcript of Protocadherin alpha 11, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha11, Length 5,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11-201ENSMUST00000115658 Leap2Q91V13 76 aa10.53□□□□□ -0.72
Pcdha11-201ENSMUST00000115658 Trav9n-2A0A0G2JDP3 113 aa10.53□□□□□ -0.72
Pcdha11-201ENSMUST00000115658 E030018B13RikJ3QMS9 113 aa10.53□□□□□ -0.72
Pcdha11-201ENSMUST00000115658 Ighv8-11A0A075B5X4 119 aa10.53□□□□□ -0.72
Pcdha11-201ENSMUST00000115658 B230359F08RikA0A0B4J1K3 109 aa10.53□□□□□ -0.72
Pcdha11-201ENSMUST00000115658 Gm7257D3YX25 99 aa10.53□□□□□ -0.72
Pcdha11-201ENSMUST00000115658 P01747 120 aa10.53□□□□□ -0.72
Pcdha11-201ENSMUST00000115658 Smr3aQ61900 147 aa10.53□□□□□ -0.72
Pcdha11-201ENSMUST00000115658 Rai1Q61818 1889 aa10.53□□□□□ -0.72
Pcdha11-201ENSMUST00000115658 Trav13d-4A0A0G2JFX3 110 aa10.53□□□□□ -0.72
Pcdha11-201ENSMUST00000115658 Dnajc13D4AFX7 2248 aaKnown RBP10.53□□□□□ -0.72
Pcdha11-201ENSMUST00000115658 BlcapP62951 87 aa10.53□□□□□ -0.72
Pcdha11-201ENSMUST00000115658 A130051J06RikQ8CAU1 227 aa10.52□□□□□ -0.72
Pcdha11-201ENSMUST00000115658 Notch4P31695 1964 aa10.52□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Trav9-2A0A075B647 113 aa10.52□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Trav9-4A0A0B4J1K2 113 aa10.52□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Cacna1aP97445 2368 aa10.52□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Trav13-4-dv7A0A075B6C2 110 aa10.52□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 CnfnQ6PCW6 111 aa10.52□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Igkv1-122A0A140T8M9 119 aa10.52□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Ly6g6dQ9Z1Q3 135 aa10.51□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Shank1D3YZU1 2167 aa10.51□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Msrb2Q78J03 175 aa10.51□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Gm4861Q8C5A4 106 aa10.51□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Ints1Q6P4S8 2195 aa10.51□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 PkdrejQ9Z0T6 2126 aa10.51□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Trav9d-3A0A075B695 113 aa10.5□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Nop10Q9CQS2 64 aa10.5□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Gm10518F6UQQ9 182 aa10.5□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Col8a2P25318 699 aa10.5□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 SrarpQ3ULG3 163 aa10.5□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Trav14-1A0A0G2JF94 121 aa10.5□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Igkv3-2A0A075B5P0 119 aa10.5□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Ighv3-1A0A075B5S6 116 aa10.5□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 TshbP12656 138 aa10.49□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 AtrxQ61687 2476 aaKnown RBP10.49□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 CrebbpP45481 2441 aa10.49□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Ighv1-85A0A075B5Y6 117 aa10.48□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Eif4ebp1Q60876 117 aa10.48□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 4930535I16RikQ9CUI2 172 aa10.48□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Q99M08 65 aa10.48□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Gpr179E9PY61 2293 aa10.48□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 5730596B20RikQ8BQ08 205 aa10.48□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Gm16223Q8CBM3 117 aa10.48□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Trav13-2A0A075B649 110 aa10.47□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Klk9Q32M27 251 aa10.47□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 P01729 129 aa10.47□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Ighv2-6-8A0A0A6YWY9 116 aa10.47□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Tet2Q4JK59 1912 aaKnown RBP10.46□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Gm10553J3QPF1 123 aa10.46□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 4930432M17RikQ3V0W9 174 aa10.46□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Ube2d4D3YUH6 135 aa10.46□□□□□ -0.73
Pcdha11-201ENSMUST00000115658 Gm21748Q3UE70 102 aa10.45□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 Apoc4Q61268 124 aa10.45□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 Prr15lQ8JZM2 100 aa10.45□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 Gm10135F6TEE5 83 aa10.45□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 HelzQ6DFV5 1964 aaKnown RBP10.45□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 B430305J03RikQ8BQQ8 176 aa10.44□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 Prr13Q9CQJ5 137 aa10.44□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 Arfgef3Q3UGY8 2170 aa10.44□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 Gm9970F6ZED4 185 aa10.44□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 Ebi3O35228 228 aa10.43□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 P06320 134 aa10.43□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 Tmem223Q9CQE2 199 aaKnown RBP10.43□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 Cox7a1P56392 80 aa10.43□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 Ighv1-82A0A0G2JEU7 117 aa10.43□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 Prh1P05142 261 aa10.42□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 Ighv5-8A0A075B676 92 aa10.42□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 Pglyrp1O88593 182 aa10.41□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 Prop1P97458 223 aa10.41□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 Crybg1A0A0G2JG52 2065 aa10.41□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 P01820 115 aa10.4□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 Cox6b1P56391 86 aaKnown RBP10.4□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 Ncoa6Q9JL19 2067 aa10.4□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 1110002E22RikE0CYV9 1786 aa10.4□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 1810032O08RikE9PZV8 113 aa10.4□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 GfyJ3KML8 504 aa10.4□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 Cacna1eQ61290 2272 aa10.4□□□□□ -0.74
Pcdha11-201ENSMUST00000115658 Fhl1P97447 280 aaKnown RBP10.4□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 AgrnA2ASQ1 1950 aa10.4□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Zfand3Q497H0 227 aa10.39□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Ros1Q78DX7 2340 aa10.39□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Igkv8-26A0A075B5N5 123 aa10.39□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Ighv2-7A0A075B5Q8 116 aa10.39□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 TprF6ZDS4 2431 aaKnown RBP10.39□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Tm2d2Q8R0I4 213 aa10.39□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Gm12353A2AGJ4 60 aa10.39□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Gm19410A0A140LJC7 2098 aa10.38□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Polr2kQ63871 58 aa10.38□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 TeppQ6IMH0 216 aa10.38□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Crip2Q9DCT8 208 aaKnown RBP10.38□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Tcl1b3P56842 122 aa10.38□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 CdsnQ7TPC1 561 aa10.38□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Tln2Q71LX4 2375 aa10.38□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Crlf1Q9JM58 425 aa10.38□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 H2al1bA0A087WP11 105 aa10.38□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Vpreb3D3Z6J4 130 aa10.37□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 P01823 113 aa10.37□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 4930470P17RikQ9D542 155 aa10.37□□□□□ -0.75
Pcdha11-201ENSMUST00000115658 Ighv1-5A0A0A6YWG2 117 aa10.37□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 126.3 ms