RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Rif1Q6PR54 2419 aaKnown RBP12.31□□□□□ -0.44
Ubr3-201ENSMUST00000055758 Gm19684G3UZ45 117 aa12.31□□□□□ -0.44
Ubr3-201ENSMUST00000055758 Rnf152Q8BG47 203 aa12.31□□□□□ -0.44
Ubr3-201ENSMUST00000055758 Ormdl1Q921I0 153 aa12.31□□□□□ -0.44
Ubr3-201ENSMUST00000055758 Igkv3-7A0A0G2JE31 119 aa12.3□□□□□ -0.44
Ubr3-201ENSMUST00000055758 Trav13n-2A0A0G2JF93 110 aa12.3□□□□□ -0.44
Ubr3-201ENSMUST00000055758 Foxs1Q61574 329 aa12.3□□□□□ -0.44
Ubr3-201ENSMUST00000055758 Lhfpl1Q80SV1 220 aa12.3□□□□□ -0.44
Ubr3-201ENSMUST00000055758 Gm20604F8WIA3 75 aa12.3□□□□□ -0.44
Ubr3-201ENSMUST00000055758 Ebi3O35228 228 aa12.3□□□□□ -0.44
Ubr3-201ENSMUST00000055758 Gm10881P01642 115 aa12.3□□□□□ -0.44
Ubr3-201ENSMUST00000055758 Gm9936Q8C864 160 aa12.3□□□□□ -0.44
Ubr3-201ENSMUST00000055758 Tfpi2O35536 230 aa12.29□□□□□ -0.44
Ubr3-201ENSMUST00000055758 Gm10775Q3V290 127 aa12.29□□□□□ -0.44
Ubr3-201ENSMUST00000055758 GfyJ3KML8 504 aa12.29□□□□□ -0.44
Ubr3-201ENSMUST00000055758 Ighv1-19A0A0A6YWX0 117 aa12.29□□□□□ -0.44
Ubr3-201ENSMUST00000055758 Tmem210Q9D2F0 147 aa12.28□□□□□ -0.44
Ubr3-201ENSMUST00000055758 Trbv14A0A140T8L9 115 aa12.28□□□□□ -0.44
Ubr3-201ENSMUST00000055758 Ighv1-74A0A0G2JGK2 117 aa12.27□□□□□ -0.44
Ubr3-201ENSMUST00000055758 4933414I15RikQ9D4D5 133 aa12.27□□□□□ -0.44
Ubr3-201ENSMUST00000055758 Gm12253Q5NC48 229 aa12.27□□□□□ -0.44
Ubr3-201ENSMUST00000055758 Pglyrp1O88593 182 aa12.27□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Gm17521F6QAC8 156 aa12.26□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Tcl1b3P56842 122 aa12.26□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Cox17P56394 63 aa12.26□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Rpl39P62892 51 aa12.26□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Atox1O08997 68 aaKnown RBP12.26□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Trav13n-1A0A0G2JEU8 110 aa12.26□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Ighv1-50A0A075B5W1 117 aa12.26□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Ighv1-64A0A075B5X3 117 aa12.26□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Rpl39lQ9CQD0 51 aa12.26□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Mrpl35Q9CQL6 188 aa12.26□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Trav13d-1A0A075B606 110 aa12.25□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Trav4-3A0A0B4J1K1 110 aa12.25□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Gata3P23772 443 aa12.25□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Ighv1-4A0A075B5T4 117 aa12.25□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Cox7bP56393 80 aa12.24□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Camk2n2Q78WH7 79 aa12.24□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Gm10638F6QEG2 257 aa12.24□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Vopp1Q8R1C3 172 aa12.24□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Trav13d-4A0A0G2JFX3 110 aa12.23□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Cfap126Q6P8X9 189 aa12.23□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Igkv8-30A0A140T8M3 121 aa12.23□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Smrp1Q2MH31 260 aa12.23□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Fancd2osQ9D4K4 178 aa12.23□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Fstl3Q9EQC7 256 aa12.23□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Fam216bQ8CC14 138 aa12.23□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Gm42674D3YUT9 64 aa12.23□□□□□ -0.45
Ubr3-201ENSMUST00000055758 P01649 108 aa12.23□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Trav9n-2A0A0G2JDP3 113 aa12.22□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Wipf1Q8K1I7 493 aa12.22□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Col5a3Q9JLI2 1739 aa12.22□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Igkv1-110A0A0B4J1I0 119 aa12.22□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Zfp36l1P23950 338 aa12.22□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Zmat4Q8BZ94 229 aa12.22□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Atp6v0e2Q91XE7 81 aa12.22□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Timm17bQ9Z0V7 172 aa12.22□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Tmem213Q08EA8 116 aa12.22□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Znf672Q99LH4 468 aa12.22□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Trav13-2A0A075B649 110 aa12.21□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Ccdc179J3QM76 67 aa12.21□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Ighv1-77A0A0G2JGS9 117 aa12.21□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Ndufc1Q9CQY9 76 aa12.21□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Ighv3-6P18531 116 aa12.21□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Esm1Q9QYY7 184 aa12.21□□□□□ -0.45
Ubr3-201ENSMUST00000055758 Tm2d1Q99MB3 208 aa12.21□□□□□ -0.46
Ubr3-201ENSMUST00000055758 GrnP28798 589 aaKnown RBP12.21□□□□□ -0.46
Ubr3-201ENSMUST00000055758 NpyP57774 97 aa12.21□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Flg2Q2VIS4 2362 aa12.2□□□□□ -0.46
Ubr3-201ENSMUST00000055758 EnhoQ8K1D8 76 aa12.2□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Trav9-2A0A075B647 113 aa12.2□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Trav9-4A0A0B4J1K2 113 aa12.2□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Pde6gP09174 87 aa12.2□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Reg3bP35230 175 aa12.2□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Gm10192Q3V0S1 108 aa12.2□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Gphb5Q812B2 130 aa12.2□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Rspo1Q9Z132 265 aa12.19□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Ncor1Q60974 2453 aa12.19□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Trav13-1A0A075B644 110 aa12.18□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Gm10553J3QPF1 123 aa12.18□□□□□ -0.46
Ubr3-201ENSMUST00000055758 P06320 134 aa12.18□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Q08AU9 97 aa12.18□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Ly6g6dQ9Z1Q3 135 aa12.18□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Tpsg1Q9QUL7 311 aa12.18□□□□□ -0.46
Ubr3-201ENSMUST00000055758 4930470P17RikQ9D542 155 aa12.18□□□□□ -0.46
Ubr3-201ENSMUST00000055758 B230359F08RikA0A0B4J1K3 109 aa12.17□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Gm9887F6RFI0 207 aa12.17□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Gm10337F7DEP7 55 aa12.17□□□□□ -0.46
Ubr3-201ENSMUST00000055758 7420426K07RikQ3UX66 186 aa12.17□□□□□ -0.46
Ubr3-201ENSMUST00000055758 P01745 121 aa12.17□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Wisp3D3Z5L9 354 aa12.16□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Csrp1P97315 193 aaKnown RBP12.16□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Dmrtc1c1Q9D410 238 aa12.16□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Tcl1b5P56845 121 aa12.16□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Gm17677B3GLJ5 116 aa12.16□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Fam19a1Q7TPG8 133 aa12.16□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Loxl1P97873 607 aa12.15□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Ighv10-3A0A075B5T6 119 aa12.15□□□□□ -0.46
Ubr3-201ENSMUST00000055758 A730015C16RikQ8C992 119 aa12.15□□□□□ -0.46
Ubr3-201ENSMUST00000055758 Trav13-4-dv7A0A075B6C2 110 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms