RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 H2al1bA0A087WP11 105 aa8.4□□□□□ -1.06
Ciita-201ENSMUST00000023147 Tmem210Q9D2F0 147 aa8.4□□□□□ -1.06
Ciita-201ENSMUST00000023147 Tns1E9Q0S6 1888 aaKnown RBP8.4□□□□□ -1.07
Ciita-201ENSMUST00000023147 Ighv8-8A0A0A6YXQ0 119 aa8.4□□□□□ -1.07
Ciita-201ENSMUST00000023147 Ighv1-4A0A075B5T4 117 aa8.39□□□□□ -1.07
Ciita-201ENSMUST00000023147 Ighv6-7A0A0A6YWU3 119 aa8.39□□□□□ -1.07
Ciita-201ENSMUST00000023147 Igkv1-88A0A140T8N1 120 aa8.39□□□□□ -1.07
Ciita-201ENSMUST00000023147 Ighv1-12A0A0A6YXJ9 117 aa8.39□□□□□ -1.07
Ciita-201ENSMUST00000023147 Igkv8-21A0A140T8P7 120 aa8.39□□□□□ -1.07
Ciita-201ENSMUST00000023147 P01753 117 aa8.39□□□□□ -1.07
Ciita-201ENSMUST00000023147 P04944 107 aa8.39□□□□□ -1.07
Ciita-201ENSMUST00000023147 Cdpf1Q8R3A2 119 aa8.39□□□□□ -1.07
Ciita-201ENSMUST00000023147 Ormdl1Q921I0 153 aa8.39□□□□□ -1.07
Ciita-201ENSMUST00000023147 Tmem223Q9CQE2 199 aaKnown RBP8.39□□□□□ -1.07
Ciita-201ENSMUST00000023147 Hrct1Q9D6B9 109 aa8.39□□□□□ -1.07
Ciita-201ENSMUST00000023147 P01791 123 aa8.39□□□□□ -1.07
Ciita-201ENSMUST00000023147 Ndufs5Q99LY9 106 aa8.39□□□□□ -1.07
Ciita-201ENSMUST00000023147 Plxnb1Q8CJH3 2119 aa8.39□□□□□ -1.07
Ciita-201ENSMUST00000023147 Arid1bE9Q4N7 2244 aa8.39□□□□□ -1.07
Ciita-201ENSMUST00000023147 Gm26602M0QWA4 95 aa8.38□□□□□ -1.07
Ciita-201ENSMUST00000023147 Hoxb4P10284 250 aa8.38□□□□□ -1.07
Ciita-201ENSMUST00000023147 Cd24P24807 76 aa8.38□□□□□ -1.07
Ciita-201ENSMUST00000023147 Sox16Q62247 57 aa8.38□□□□□ -1.07
Ciita-201ENSMUST00000023147 Gphb5Q812B2 130 aa8.38□□□□□ -1.07
Ciita-201ENSMUST00000023147 IgipA0A1B0GR74 53 aa8.38□□□□□ -1.07
Ciita-201ENSMUST00000023147 Cspg4Q8VHY0 2327 aa8.38□□□□□ -1.07
Ciita-201ENSMUST00000023147 Ighv3-1A0A075B5S6 116 aa8.38□□□□□ -1.07
Ciita-201ENSMUST00000023147 Gm17455G3UW87 128 aa8.38□□□□□ -1.07
Ciita-201ENSMUST00000023147 Gm10401E9Q3K6 71 aa8.38□□□□□ -1.07
Ciita-201ENSMUST00000023147 CstadQ9D245 104 aa8.38□□□□□ -1.07
Ciita-201ENSMUST00000023147 Fer1l4A3KGK3 1992 aa8.37□□□□□ -1.07
Ciita-201ENSMUST00000023147 CrygdP04342 174 aa8.37□□□□□ -1.07
Ciita-201ENSMUST00000023147 Reg3bP35230 175 aa8.37□□□□□ -1.07
Ciita-201ENSMUST00000023147 Igkv3-4A0A140T8Q4 119 aa8.37□□□□□ -1.07
Ciita-201ENSMUST00000023147 Wdr90Q6ZPG2 1874 aa8.37□□□□□ -1.07
Ciita-201ENSMUST00000023147 Trav4-3A0A0B4J1K1 110 aa8.37□□□□□ -1.07
Ciita-201ENSMUST00000023147 AcacbE9Q4Z2 2448 aa8.37□□□□□ -1.07
Ciita-201ENSMUST00000023147 Ighv1-62-1A0A075B5U3 116 aa8.37□□□□□ -1.07
Ciita-201ENSMUST00000023147 Tmem254aP0DN89 123 aa8.37□□□□□ -1.07
Ciita-201ENSMUST00000023147 Tmem254bP0DN90 123 aa8.37□□□□□ -1.07
Ciita-201ENSMUST00000023147 Tmem254cP0DN91 123 aa8.37□□□□□ -1.07
Ciita-201ENSMUST00000023147 H2al1mQ9DAD9 105 aa8.37□□□□□ -1.07
Ciita-201ENSMUST00000023147 Gm6034E9Q101 117 aa8.36□□□□□ -1.07
Ciita-201ENSMUST00000023147 Prh1P05142 261 aa8.36□□□□□ -1.07
Ciita-201ENSMUST00000023147 Rpl18aP62717 176 aaKnown RBP8.36□□□□□ -1.07
Ciita-201ENSMUST00000023147 Pou2af1Q64693 256 aa8.36□□□□□ -1.07
Ciita-201ENSMUST00000023147 Zc2hc1aQ8BJH1 324 aa8.36□□□□□ -1.07
Ciita-201ENSMUST00000023147 Col4a2P08122 1707 aa8.36□□□□□ -1.07
Ciita-201ENSMUST00000023147 Gm17472A0A075B683 117 aa8.36□□□□□ -1.07
Ciita-201ENSMUST00000023147 7420426K07RikQ3UX66 186 aa8.36□□□□□ -1.07
Ciita-201ENSMUST00000023147 Trav13-2A0A075B649 110 aa8.36□□□□□ -1.07
Ciita-201ENSMUST00000023147 Trav11A0A0B4J1J9 114 aa8.36□□□□□ -1.07
Ciita-201ENSMUST00000023147 Trav9-2A0A075B647 113 aa8.36□□□□□ -1.07
Ciita-201ENSMUST00000023147 Trav9-4A0A0B4J1K2 113 aa8.36□□□□□ -1.07
Ciita-201ENSMUST00000023147 E030018B13RikJ3QMS9 113 aa8.36□□□□□ -1.07
Ciita-201ENSMUST00000023147 Defb47Q30KN1 79 aa8.36□□□□□ -1.07
Ciita-201ENSMUST00000023147 Foxi2Q3I5G5 311 aa8.36□□□□□ -1.07
Ciita-201ENSMUST00000023147 1500011B03RikQ3TTH7 73 aa8.36□□□□□ -1.07
Ciita-201ENSMUST00000023147 Gm17577J3QNF7 156 aa8.35□□□□□ -1.07
Ciita-201ENSMUST00000023147 Vsig4F6TUL9 280 aa8.35□□□□□ -1.07
Ciita-201ENSMUST00000023147 Gm10553J3QPF1 123 aa8.35□□□□□ -1.07
Ciita-201ENSMUST00000023147 Ighv1-77A0A0G2JGS9 117 aa8.34□□□□□ -1.07
Ciita-201ENSMUST00000023147 9430069I07RikQ9CX21 111 aa8.34□□□□□ -1.07
Ciita-201ENSMUST00000023147 Ttc28Q80XJ3 2450 aa8.34□□□□□ -1.07
Ciita-201ENSMUST00000023147 Gp9O88186 177 aa8.33□□□□□ -1.08
Ciita-201ENSMUST00000023147 Klk9Q32M27 251 aa8.33□□□□□ -1.08
Ciita-201ENSMUST00000023147 PpdpfQ9CR37 115 aa8.32□□□□□ -1.08
Ciita-201ENSMUST00000023147 Notch4P31695 1964 aa8.32□□□□□ -1.08
Ciita-201ENSMUST00000023147 Obox8V9GWY9 217 aa8.32□□□□□ -1.08
Ciita-201ENSMUST00000023147 Hivep2Q3UHF7 2430 aa8.32□□□□□ -1.08
Ciita-201ENSMUST00000023147 Igkv2-109A0A075B5K6 120 aa8.32□□□□□ -1.08
Ciita-201ENSMUST00000023147 Ebi3O35228 228 aa8.32□□□□□ -1.08
Ciita-201ENSMUST00000023147 P01643 108 aa8.32□□□□□ -1.08
Ciita-201ENSMUST00000023147 Crip1P63254 77 aa8.32□□□□□ -1.08
Ciita-201ENSMUST00000023147 Fam19a4Q7TPG5 135 aa8.32□□□□□ -1.08
Ciita-201ENSMUST00000023147 Gm10295Q8CCF3 114 aa8.32□□□□□ -1.08
Ciita-201ENSMUST00000023147 AngP21570 145 aa8.32□□□□□ -1.08
Ciita-201ENSMUST00000023147 Ndufc1Q9CQY9 76 aa8.31□□□□□ -1.08
Ciita-201ENSMUST00000023147 Klk12B2RVZ0 247 aa8.31□□□□□ -1.08
Ciita-201ENSMUST00000023147 Gm14137Q8CE97 175 aa8.31□□□□□ -1.08
Ciita-201ENSMUST00000023147 Piezo1E2JF22 2547 aa8.31□□□□□ -1.08
Ciita-201ENSMUST00000023147 Gm17521F6QAC8 156 aa8.31□□□□□ -1.08
Ciita-201ENSMUST00000023147 1700010B08RikQ9DAI7 102 aa8.31□□□□□ -1.08
Ciita-201ENSMUST00000023147 Col4a4Q9QZR9 1682 aa8.31□□□□□ -1.08
Ciita-201ENSMUST00000023147 Gm9573F7C950 1606 aa8.31□□□□□ -1.08
Ciita-201ENSMUST00000023147 Trbv16A0A0B4J1H3 115 aa8.31□□□□□ -1.08
Ciita-201ENSMUST00000023147 Trav13d-4A0A0G2JFX3 110 aa8.31□□□□□ -1.08
Ciita-201ENSMUST00000023147 NpbQ8K4P1 119 aa8.31□□□□□ -1.08
Ciita-201ENSMUST00000023147 Ndufb4Q9CQC7 129 aa8.31□□□□□ -1.08
Ciita-201ENSMUST00000023147 Iglc1A0A0G2JE99 106 aa8.3□□□□□ -1.08
Ciita-201ENSMUST00000023147 P01843 105 aa8.3□□□□□ -1.08
Ciita-201ENSMUST00000023147 C920008G01RikA0A0B4J1N1 112 aa8.3□□□□□ -1.08
Ciita-201ENSMUST00000023147 Tfpi2O35536 230 aa8.3□□□□□ -1.08
Ciita-201ENSMUST00000023147 Gm20604F8WIA3 75 aa8.3□□□□□ -1.08
Ciita-201ENSMUST00000023147 Arhgef17Q80U35 2057 aa8.29□□□□□ -1.08
Ciita-201ENSMUST00000023147 Igkv4-92A0A0B4J1I2 117 aa8.29□□□□□ -1.08
Ciita-201ENSMUST00000023147 Atp5eP56382 52 aa8.29□□□□□ -1.08
Ciita-201ENSMUST00000023147 Defb18Q30KP5 85 aa8.29□□□□□ -1.08
Ciita-201ENSMUST00000023147 Apoc4Q61268 124 aa8.29□□□□□ -1.08
Ciita-201ENSMUST00000023147 BC067074F6RXI4 2391 aa8.29□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 42.1 ms