RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Fam222aQ6PGH4 453 aa9.08□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Mrpl35Q9CQL6 188 aa9.08□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Tspan13Q9D8C2 204 aa9.08□□□□□ -0.96
Ctr9-201ENSMUST00000005749 1520401A03RikA0A0J9YVH6 598 aa9.08□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Q99M08 65 aa9.08□□□□□ -0.96
Ctr9-201ENSMUST00000005749 E130218I03RikA0A0U1RNU5 63 aa9.07□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Gata3P23772 443 aa9.07□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Olfr313Q5NC55 308 aa9.07□□□□□ -0.96
Ctr9-201ENSMUST00000005749 P06328 117 aa9.07□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Atp5g3P56384 141 aa9.07□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Atp5g1Q9CR84 136 aa9.07□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Shisa9Q9CZN4 424 aa9.07□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Gm29423A0A087WRM1 55 aa9.07□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Defa28D3Z1V9 94 aa9.07□□□□□ -0.96
Ctr9-201ENSMUST00000005749 P01745 121 aa9.07□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Cox8bP48772 70 aa9.07□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Zcwpw2Q08EN7 125 aa9.07□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Gm45785A0A1B0GT05 94 aa9.07□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Gm12689Q8BQU9 117 aa9.07□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Igkv4-68A0A0B4J1I7 117 aa9.06□□□□□ -0.96
Ctr9-201ENSMUST00000005749 NbeaQ9EPN1 2936 aa9.06□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Trav6-6A0A075B603 114 aa9.06□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Tmem238A9JSM3 176 aa9.06□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Klk5Q9D140 293 aa9.06□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Obox8V9GWY9 217 aa9.06□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Trav9d-4A0A0G2JG37 103 aa9.05□□□□□ -0.96
Ctr9-201ENSMUST00000005749 1500009C09RikD3YYW9 81 aa9.05□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Vamp8O70404 101 aa9.05□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Ang3P97802 145 aa9.05□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Igkv4-74A0A0B4J1I3 119 aa9.05□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Trav13d-1A0A075B606 110 aa9.04□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Egr2P08152 470 aa9.04□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Fam19a4Q7TPG5 135 aa9.04□□□□□ -0.96
Ctr9-201ENSMUST00000005749 NipblQ6KCD5 2798 aaKnown RBP9.04□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Nbeal2Q6ZQA0 2742 aa9.04□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Gm20517G3UVU6 152 aa9.04□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Q9D131 166 aa9.04□□□□□ -0.96
Ctr9-201ENSMUST00000005749 1500011B03RikQ3TTH7 73 aa9.04□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Hist2h2beQ64524 126 aa9.04□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Q9D8Q6 235 aa9.04□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Trav3n-3A0A0G2JEM0 114 aa9.04□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Fhl2O70433 279 aa9.04□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Znf239P24399 201 aa9.04□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Gm8439G3UWA7 96 aa9.03□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Lect2O88803 151 aa9.03□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Vwc2lQ505H4 222 aa9.03□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Atp6v0e2Q91XE7 81 aa9.03□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Tac4Q99N14 128 aa9.03□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Fam216aQ9DB54 251 aa9.03□□□□□ -0.96
Ctr9-201ENSMUST00000005749 P01674 108 aa9.02□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Reg3dQ9QUS9 175 aa9.02□□□□□ -0.96
Ctr9-201ENSMUST00000005749 Gm5878E9PUB3 99 aa9.02□□□□□ -0.97
Ctr9-201ENSMUST00000005749 TroQ6DIC6 2087 aa9.02□□□□□ -0.97
Ctr9-201ENSMUST00000005749 NpsP0C0P8 89 aa9.01□□□□□ -0.97
Ctr9-201ENSMUST00000005749 BC048562Q80ZQ7 204 aa9.01□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Pgpep1Q9ESW8 209 aa9.01□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Dchs1E9PVD3 3291 aa9□□□□□ -0.97
Ctr9-201ENSMUST00000005749 S100a8P27005 89 aa9□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Reg3bP35230 175 aa9□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Rmi2Q3UPE3 149 aa9□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Gphb5Q812B2 130 aa9□□□□□ -0.97
Ctr9-201ENSMUST00000005749 CckP09240 115 aa9□□□□□ -0.97
Ctr9-201ENSMUST00000005749 D130052B06RikQ3UW13 202 aa9□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Gm9747Q810H1 104 aa9□□□□□ -0.97
Ctr9-201ENSMUST00000005749 C1qcQ02105 246 aa8.99□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Bud31Q6PGH1 103 aa8.99□□□□□ -0.97
Ctr9-201ENSMUST00000005749 A130051J06RikQ8CAU1 227 aa8.99□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Olfr1367Q8VFG2 316 aa8.99□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Tomm6Q9CQN3 74 aa8.99□□□□□ -0.97
Ctr9-201ENSMUST00000005749 E130114P18RikF6S0S7 154 aa8.99□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Hint1P70349 126 aaKnown RBP8.99□□□□□ -0.97
Ctr9-201ENSMUST00000005749 7420426K07RikQ3UX66 186 aa8.99□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Lypd6Q8BPP5 171 aa8.99□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Mustn1Q99JI1 82 aa8.99□□□□□ -0.97
Ctr9-201ENSMUST00000005749 SpegQ62407 3262 aa8.98□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Pkd1l1Q8R526 2615 aa8.98□□□□□ -0.97
Ctr9-201ENSMUST00000005749 LhbO09108 141 aa8.98□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Bri3P28662 125 aa8.98□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Vmn1r197Q8R265 298 aa8.98□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Gm10542F6XDR3 90 aa8.98□□□□□ -0.97
Ctr9-201ENSMUST00000005749 FshbQ60687 130 aa8.98□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Hivep1Q03172 2688 aa8.98□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Igkv4-59A0A0B4J1I8 117 aa8.97□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Hbb-bsA8DUK4 147 aa8.97□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Gm7102J3QQ10 178 aa8.97□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Hbb-b1P02088 147 aa8.97□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Ndufa4l2Q4FZG9 87 aa8.97□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Odf3Q920N1 254 aa8.97□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Trav12-3A0A075B648 115 aa8.97□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Trav13d-4A0A0G2JFX3 110 aa8.97□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Igkv4-61A0A0G2JH00 117 aa8.97□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Psmb8P28063 276 aa8.97□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Defb10Q8R2I8 73 aa8.96□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Znhit3Q9CQK1 151 aa8.96□□□□□ -0.97
Ctr9-201ENSMUST00000005749 CrygfQ9CXV3 174 aa8.96□□□□□ -0.97
Ctr9-201ENSMUST00000005749 Trav13n-1A0A0G2JEU8 110 aa8.96□□□□□ -0.98
Ctr9-201ENSMUST00000005749 Cox17P56394 63 aa8.96□□□□□ -0.98
Ctr9-201ENSMUST00000005749 March3Q8BRX9 218 aa8.96□□□□□ -0.98
Ctr9-201ENSMUST00000005749 Morn3Q8C5T4 241 aa8.96□□□□□ -0.98
Ctr9-201ENSMUST00000005749 Dpm2Q9Z324 84 aa8.96□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 32.1 ms