RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Rhox8Q6VSS7 320 aa22.44■■□□□ 1.18
Ctr9-201ENSMUST00000005749 NischQ80TM9 1593 aa20.53■□□□□ 0.88
Ctr9-201ENSMUST00000005749 Ccdc136Q3TVA9 1136 aa20.29■□□□□ 0.84
Ctr9-201ENSMUST00000005749 Esf1Q3V1V3 845 aaKnown RBP19.88■□□□□ 0.77
Ctr9-201ENSMUST00000005749 Ehmt2Q9Z148 1263 aaKnown RBP19.8■□□□□ 0.76
Ctr9-201ENSMUST00000005749 Cngb1E1AZ71 1325 aa19.78■□□□□ 0.76
Ctr9-201ENSMUST00000005749 Abcc9P70170 1546 aa19.62■□□□□ 0.73
Ctr9-201ENSMUST00000005749 Gab3Q8BSM5 595 aa19.55■□□□□ 0.72
Ctr9-201ENSMUST00000005749 Trim41Q5NCC3 630 aa19.44■□□□□ 0.7
Ctr9-201ENSMUST00000005749 Gm35339A0A140LHH9 1649 aa19.35■□□□□ 0.69
Ctr9-201ENSMUST00000005749 Zeb1Q64318 1117 aa19.3■□□□□ 0.68
Ctr9-201ENSMUST00000005749 Npm2Q80W85 207 aa19.19■□□□□ 0.66
Ctr9-201ENSMUST00000005749 Myt1lP97500 1187 aa19.17■□□□□ 0.66
Ctr9-201ENSMUST00000005749 Il27Q8K3I6 234 aa19.01■□□□□ 0.63
Ctr9-201ENSMUST00000005749 Zcchc6Q5BLK4 1491 aaKnown RBP18.97■□□□□ 0.63
Ctr9-201ENSMUST00000005749 Abcc8B2RUS7 1588 aa18.95■□□□□ 0.62
Ctr9-201ENSMUST00000005749 Ube2uB1AUC4 352 aa18.86■□□□□ 0.61
Ctr9-201ENSMUST00000005749 UbtfP25976 765 aaKnown RBP18.55■□□□□ 0.56
Ctr9-201ENSMUST00000005749 Wdr66E9Q743 1299 aa18.53■□□□□ 0.56
Ctr9-201ENSMUST00000005749 Rpgrip1Q9EPQ2 1331 aa18.48■□□□□ 0.55
Ctr9-201ENSMUST00000005749 Ap3b1Q9Z1T1 1105 aa18.39■□□□□ 0.53
Ctr9-201ENSMUST00000005749 Las1lA2BE28 776 aaKnown RBP18.35■□□□□ 0.53
Ctr9-201ENSMUST00000005749 HrcG5E8J6 738 aa18.32■□□□□ 0.52
Ctr9-201ENSMUST00000005749 Npm1Q61937 292 aaKnown RBP18.19■□□□□ 0.5
Ctr9-201ENSMUST00000005749 Ccdc180J3QNE4 1664 aa18.13■□□□□ 0.49
Ctr9-201ENSMUST00000005749 Fam50aQ9WV03 339 aaKnown RBP18.07■□□□□ 0.48
Ctr9-201ENSMUST00000005749 Rb1cc1Q9ESK9 1588 aa18■□□□□ 0.47
Ctr9-201ENSMUST00000005749 Chic1Q8CBW7 227 aa17.96■□□□□ 0.47
Ctr9-201ENSMUST00000005749 Lmod2Q3UHZ5 550 aa17.96■□□□□ 0.47
Ctr9-201ENSMUST00000005749 Ifnlr1Q8CGK5 535 aa17.95■□□□□ 0.46
Ctr9-201ENSMUST00000005749 Ubl4bQ9CQ84 188 aa17.94■□□□□ 0.46
Ctr9-201ENSMUST00000005749 Acin1Q9JIX8 1338 aaKnown RBP17.93■□□□□ 0.46
Ctr9-201ENSMUST00000005749 NacadQ5SWP3 1504 aa17.88■□□□□ 0.45
Ctr9-201ENSMUST00000005749 Plekhg3Q4VAC9 1341 aa17.86■□□□□ 0.45
Ctr9-201ENSMUST00000005749 Neurod1Q60867 357 aa17.86■□□□□ 0.45
Ctr9-201ENSMUST00000005749 Zbtb7cQ8VCZ7 619 aa17.84■□□□□ 0.45
Ctr9-201ENSMUST00000005749 Ppargc1bQ8VHJ7 1014 aa17.84■□□□□ 0.45
Ctr9-201ENSMUST00000005749 Rtl1Q7M732 1744 aa17.84■□□□□ 0.45
Ctr9-201ENSMUST00000005749 Brd4Q9ESU6 1400 aaKnown RBP17.83■□□□□ 0.44
Ctr9-201ENSMUST00000005749 Fkbp15Q6P9Q6 1216 aaKnown RBP17.8■□□□□ 0.44
Ctr9-201ENSMUST00000005749 NefmP08553 848 aa17.78■□□□□ 0.44
Ctr9-201ENSMUST00000005749 Slc24a1Q91WD8 1130 aa17.77■□□□□ 0.44
Ctr9-201ENSMUST00000005749 Dcaf1Q80TR8 1506 aa17.72■□□□□ 0.43
Ctr9-201ENSMUST00000005749 Kdm5dQ62240 1548 aa17.67■□□□□ 0.42
Ctr9-201ENSMUST00000005749 Mier1Q5UAK0 511 aa17.58■□□□□ 0.4
Ctr9-201ENSMUST00000005749 Plppr3Q7TPB0 716 aa17.57■□□□□ 0.4
Ctr9-201ENSMUST00000005749 NclP09405 707 aaKnown RBP17.57■□□□□ 0.4
Ctr9-201ENSMUST00000005749 Hnrnpul2Q00PI9 745 aaKnown RBP17.56■□□□□ 0.4
Ctr9-201ENSMUST00000005749 Pelp1Q9DBD5 1123 aaKnown RBP17.56■□□□□ 0.4
Ctr9-201ENSMUST00000005749 Os9Q8K2C7 672 aa17.53■□□□□ 0.4
Ctr9-201ENSMUST00000005749 Baz1aO88379 1555 aa17.53■□□□□ 0.4
Ctr9-201ENSMUST00000005749 Eid3Q3V124 375 aa17.48■□□□□ 0.39
Ctr9-201ENSMUST00000005749 Kif15Q6P9L6 1387 aa17.45■□□□□ 0.38
Ctr9-201ENSMUST00000005749 Clip1Q922J3 1391 aa17.42■□□□□ 0.38
Ctr9-201ENSMUST00000005749 Zbtb4Q5F293 982 aa17.41■□□□□ 0.38
Ctr9-201ENSMUST00000005749 Cep164Q5DU05 1446 aa17.37■□□□□ 0.37
Ctr9-201ENSMUST00000005749 TonslQ6NZL6 1363 aa17.33■□□□□ 0.36
Ctr9-201ENSMUST00000005749 Gm13697A2AK42 830 aa17.31■□□□□ 0.36
Ctr9-201ENSMUST00000005749 Erich6D3Z6S9 713 aa17.31■□□□□ 0.36
Ctr9-201ENSMUST00000005749 Rsf1E9PWW9 1441 aaKnown RBP17.28■□□□□ 0.36
Ctr9-201ENSMUST00000005749 Ttbk1Q6PCN3 1308 aa17.27■□□□□ 0.36
Ctr9-201ENSMUST00000005749 Chic2Q9D9G3 165 aa17.27■□□□□ 0.36
Ctr9-201ENSMUST00000005749 Mapk8ip2Q9ERE9 830 aa17.26■□□□□ 0.35
Ctr9-201ENSMUST00000005749 Ercc6F8VPZ5 1481 aa17.25■□□□□ 0.35
Ctr9-201ENSMUST00000005749 Golga3P55937 1487 aa17.24■□□□□ 0.35
Ctr9-201ENSMUST00000005749 Pcgf6Q99NA9 353 aa17.23■□□□□ 0.35
Ctr9-201ENSMUST00000005749 Supt5hO55201 1082 aaKnown RBP17.23■□□□□ 0.35
Ctr9-201ENSMUST00000005749 ScribQ80U72 1612 aa17.19■□□□□ 0.34
Ctr9-201ENSMUST00000005749 Prdm10Q3UTQ7 1184 aa17.18■□□□□ 0.34
Ctr9-201ENSMUST00000005749 Sycp2Q9CUU3 1500 aa17.17■□□□□ 0.34
Ctr9-201ENSMUST00000005749 Atp1b4Q99ME6 356 aa17.15■□□□□ 0.34
Ctr9-201ENSMUST00000005749 BlmO88700 1416 aa17.14■□□□□ 0.34
Ctr9-201ENSMUST00000005749 NrdcQ8BHG1 1161 aa17.12■□□□□ 0.33
Ctr9-201ENSMUST00000005749 Cdk11bP24788 784 aaKnown RBP17.12■□□□□ 0.33
Ctr9-201ENSMUST00000005749 Setd5Q5XJV7 1441 aa17.12■□□□□ 0.33
Ctr9-201ENSMUST00000005749 Arhgap27A2AB59 869 aa17.1■□□□□ 0.33
Ctr9-201ENSMUST00000005749 Eif5bQ05D44 1216 aaKnown RBP17.1■□□□□ 0.33
Ctr9-201ENSMUST00000005749 Pds5bQ4VA53 1446 aaKnown RBP17.09■□□□□ 0.33
Ctr9-201ENSMUST00000005749 Cecr2E9Q2Z1 1453 aa17.09■□□□□ 0.33
Ctr9-201ENSMUST00000005749 Nop58Q6DFW4 536 aaKnown RBP17.07■□□□□ 0.32
Ctr9-201ENSMUST00000005749 Stra8P70278 393 aa17.07■□□□□ 0.32
Ctr9-201ENSMUST00000005749 Anp32bQ9EST5 272 aaKnown RBP17.05■□□□□ 0.32
Ctr9-201ENSMUST00000005749 Ccdc18Q640L5 1455 aa17.03■□□□□ 0.32
Ctr9-201ENSMUST00000005749 Ccdc88bQ4QRL3 1481 aa17■□□□□ 0.31
Ctr9-201ENSMUST00000005749 Gm13695A2AK44 830 aa17■□□□□ 0.31
Ctr9-201ENSMUST00000005749 CftrP26361 1476 aa16.86■□□□□ 0.29
Ctr9-201ENSMUST00000005749 Cux2P70298 1426 aa16.84■□□□□ 0.29
Ctr9-201ENSMUST00000005749 Safb2Q80YR5 991 aaKnown RBP16.81■□□□□ 0.28
Ctr9-201ENSMUST00000005749 Eea1Q8BL66 1411 aa16.8■□□□□ 0.28
Ctr9-201ENSMUST00000005749 Arid3cA6PWV5 409 aa16.8■□□□□ 0.28
Ctr9-201ENSMUST00000005749 Sall2Q9QX96 1004 aa16.79■□□□□ 0.28
Ctr9-201ENSMUST00000005749 Atad2bE9Q166 1460 aaKnown RBP16.76■□□□□ 0.27
Ctr9-201ENSMUST00000005749 P3h3Q8CG70 732 aa16.76■□□□□ 0.27
Ctr9-201ENSMUST00000005749 ClspnQ80YR7 1315 aa16.75■□□□□ 0.27
Ctr9-201ENSMUST00000005749 Rgl3Q3UYI5 709 aa16.74■□□□□ 0.27
Ctr9-201ENSMUST00000005749 Phldb1Q6PDH0 1371 aaKnown RBP16.74■□□□□ 0.27
Ctr9-201ENSMUST00000005749 AknaQ80VW7 1404 aa16.71■□□□□ 0.27
Ctr9-201ENSMUST00000005749 Synj1Q8CHC4 1574 aa16.7■□□□□ 0.26
Ctr9-201ENSMUST00000005749 Crybg2B7ZCC2 1516 aa16.7■□□□□ 0.26
Ctr9-201ENSMUST00000005749 Rrp7aQ9D1C9 280 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms