RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 Ndufb4Q9CQC7 129 aa11.24□□□□□ -0.61
Shroom3-202ENSMUST00000113054 MyofQ69ZN7 2048 aaKnown RBP11.24□□□□□ -0.61
Shroom3-202ENSMUST00000113054 Nlrc5C3VPR6 1915 aa11.23□□□□□ -0.61
Shroom3-202ENSMUST00000113054 Rnase1P00683 149 aa11.23□□□□□ -0.61
Shroom3-202ENSMUST00000113054 GhrhP16043 103 aa11.23□□□□□ -0.61
Shroom3-202ENSMUST00000113054 Cox17P56394 63 aa11.23□□□□□ -0.61
Shroom3-202ENSMUST00000113054 Plxna2P70207 1894 aa11.23□□□□□ -0.61
Shroom3-202ENSMUST00000113054 Nxph4G3X9N5 304 aa11.23□□□□□ -0.61
Shroom3-202ENSMUST00000113054 Pcdh15Q99PJ1 1943 aa11.23□□□□□ -0.61
Shroom3-202ENSMUST00000113054 PscaP57096 123 aa11.23□□□□□ -0.61
Shroom3-202ENSMUST00000113054 Gm10735Q3US96 136 aa11.23□□□□□ -0.61
Shroom3-202ENSMUST00000113054 Klk12B2RVZ0 247 aa11.22□□□□□ -0.61
Shroom3-202ENSMUST00000113054 P01837 106 aa11.22□□□□□ -0.61
Shroom3-202ENSMUST00000113054 4930442H23RikQ9D5G7 103 aa11.22□□□□□ -0.61
Shroom3-202ENSMUST00000113054 B9d2Q3UK10 175 aa11.22□□□□□ -0.61
Shroom3-202ENSMUST00000113054 Gm20708H3BKF4 155 aa11.22□□□□□ -0.61
Shroom3-202ENSMUST00000113054 Arfgef3Q3UGY8 2170 aa11.21□□□□□ -0.61
Shroom3-202ENSMUST00000113054 Rbmy1bQ60990 380 aa11.21□□□□□ -0.61
Shroom3-202ENSMUST00000113054 Cox7b2Q9D2H1 82 aa11.21□□□□□ -0.61
Shroom3-202ENSMUST00000113054 Spry4Q9WTP2 300 aa11.21□□□□□ -0.61
Shroom3-202ENSMUST00000113054 Trav13n-2A0A0G2JF93 110 aa11.21□□□□□ -0.61
Shroom3-202ENSMUST00000113054 Lce6aD3YV94 81 aa11.21□□□□□ -0.61
Shroom3-202ENSMUST00000113054 Zic4Q61467 341 aa11.21□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Q8C708 225 aa11.21□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Usf3B2RUQ2 2221 aa11.2□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Lst1O08843 95 aa11.2□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Iglv1A0A075B663 117 aa11.2□□□□□ -0.62
Shroom3-202ENSMUST00000113054 4930470P17RikQ9D542 155 aa11.2□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Gata3P23772 443 aa11.2□□□□□ -0.62
Shroom3-202ENSMUST00000113054 CrygdP04342 174 aa11.2□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Q99M08 65 aa11.2□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Gm17577J3QNF7 156 aa11.2□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Greb1Q3UHK3 1954 aa11.19□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Sigmar1O55242 223 aa11.19□□□□□ -0.62
Shroom3-202ENSMUST00000113054 P04940 107 aa11.19□□□□□ -0.62
Shroom3-202ENSMUST00000113054 P04941 107 aa11.19□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Igkv2-109A0A075B5K6 120 aa11.19□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Gm10542F6XDR3 90 aa11.19□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Gm10638F6QEG2 257 aa11.19□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Map6d1Q14BB9 191 aa11.19□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Gp9O88186 177 aa11.18□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Ociad2Q9D8W7 154 aa11.18□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Mrpl55Q9CZ83 127 aa11.18□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Rbm3O89086 153 aaKnown RBP11.18□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Foxi2Q3I5G5 311 aa11.18□□□□□ -0.62
Shroom3-202ENSMUST00000113054 P84751 237 aa11.18□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Trav9n-4A0A075B631 113 aa11.17□□□□□ -0.62
Shroom3-202ENSMUST00000113054 BikO70337 150 aa11.17□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Pcp4P63054 62 aa11.17□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Esm1Q9QYY7 184 aa11.17□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Tnrc6aQ3UHK8 1896 aaKnown RBP11.17□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Nsun4C4P6S0 806 aaKnown RBP11.17□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Ighv1-53A0A075B5W3 117 aa11.17□□□□□ -0.62
Shroom3-202ENSMUST00000113054 P01748 117 aa11.17□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Igkv3-4A0A140T8Q4 119 aa11.17□□□□□ -0.62
Shroom3-202ENSMUST00000113054 9130230L23RikQ8CC80 163 aa11.17□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Trav4n-4A0A075B615 110 aa11.16□□□□□ -0.62
Shroom3-202ENSMUST00000113054 C920008G01RikA0A0B4J1N1 112 aa11.16□□□□□ -0.62
Shroom3-202ENSMUST00000113054 9530003J23RikQ8BM26 151 aa11.16□□□□□ -0.62
Shroom3-202ENSMUST00000113054 PkdrejQ9Z0T6 2126 aa11.16□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Igkv1-35A0A0G2JDE5 120 aa11.16□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Pip4p1Q3TWL2 284 aa11.16□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Fam19a4Q7TPG5 135 aa11.16□□□□□ -0.62
Shroom3-202ENSMUST00000113054 TncQ80YX1 2110 aa11.16□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Spink4O35679 86 aa11.15□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Plscr4P58196 326 aa11.15□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Prop1P97458 223 aa11.15□□□□□ -0.62
Shroom3-202ENSMUST00000113054 1500011B03RikQ3TTH7 73 aa11.15□□□□□ -0.62
Shroom3-202ENSMUST00000113054 F5O88783 2183 aa11.15□□□□□ -0.62
Shroom3-202ENSMUST00000113054 P01630 113 aa11.15□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Egr2P08152 470 aa11.15□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Lhfpl1Q80SV1 220 aa11.15□□□□□ -0.62
Shroom3-202ENSMUST00000113054 Igkv3-3A0A140T8Q0 119 aa11.14□□□□□ -0.63
Shroom3-202ENSMUST00000113054 BB014433Q8C5R5 389 aa11.14□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Arhgap21Q6DFV3 1944 aa11.14□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Acyp1P56376 99 aa11.14□□□□□ -0.63
Shroom3-202ENSMUST00000113054 9930022D16RikQ8BG27 128 aa11.14□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Mrpl35Q9CQL6 188 aa11.14□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Tmem243B2RVB9 118 aa11.14□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Glrp1E9Q9S8 174 aa11.14□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Spry2Q9QXV8 315 aa11.14□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Anapc1P53995 1944 aaKnown RBP11.14□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Tal2Q62282 108 aa11.14□□□□□ -0.63
Shroom3-202ENSMUST00000113054 P04942 107 aa11.12□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Wisp2Q9Z0G4 251 aa11.12□□□□□ -0.63
Shroom3-202ENSMUST00000113054 P01747 120 aa11.12□□□□□ -0.63
Shroom3-202ENSMUST00000113054 P04945 108 aa11.12□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Wisp3D3Z5L9 354 aa11.12□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Rspo3Q2TJ95 277 aa11.12□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Clec4b2Q67DU8 208 aa11.11□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Gm8251F6VUT6 1994 aa11.11□□□□□ -0.63
Shroom3-202ENSMUST00000113054 SbsponQ3UPR9 264 aa11.11□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Fam19a1Q7TPG8 133 aa11.11□□□□□ -0.63
Shroom3-202ENSMUST00000113054 AvpP35455 168 aa11.11□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Col5a3Q9JLI2 1739 aa11.11□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Trav12-3A0A075B648 115 aa11.1□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Trav6n-6A0A075B6B2 114 aa11.1□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Crip1P63254 77 aa11.1□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Gm10647E9Q8X0 124 aa11.1□□□□□ -0.63
Shroom3-202ENSMUST00000113054 Fgf6P21658 208 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 50.8 ms