RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Gm10542F6XDR3 90 aa11.78□□□□□ -0.52
Chd3-201ENSMUST00000092971 Ighv1-77A0A0G2JGS9 117 aa11.77□□□□□ -0.52
Chd3-201ENSMUST00000092971 Gm17577J3QNF7 156 aa11.77□□□□□ -0.52
Chd3-201ENSMUST00000092971 Gata3P23772 443 aa11.77□□□□□ -0.52
Chd3-201ENSMUST00000092971 Vsig4F6TUL9 280 aa11.77□□□□□ -0.52
Chd3-201ENSMUST00000092971 Edn2P22389 175 aa11.77□□□□□ -0.52
Chd3-201ENSMUST00000092971 Iglc1A0A0G2JE99 106 aa11.77□□□□□ -0.53
Chd3-201ENSMUST00000092971 Gm10881P01642 115 aa11.77□□□□□ -0.53
Chd3-201ENSMUST00000092971 P01843 105 aa11.77□□□□□ -0.53
Chd3-201ENSMUST00000092971 Q08AU9 97 aa11.77□□□□□ -0.53
Chd3-201ENSMUST00000092971 B9d2Q3UK10 175 aa11.77□□□□□ -0.53
Chd3-201ENSMUST00000092971 9430069I07RikQ9CX21 111 aa11.77□□□□□ -0.53
Chd3-201ENSMUST00000092971 Col8a2P25318 699 aa11.77□□□□□ -0.53
Chd3-201ENSMUST00000092971 Plxnd1Q3UH93 1925 aa11.76□□□□□ -0.53
Chd3-201ENSMUST00000092971 Gm42674D3YUT9 64 aa11.76□□□□□ -0.53
Chd3-201ENSMUST00000092971 Loxl1P97873 607 aa11.76□□□□□ -0.53
Chd3-201ENSMUST00000092971 Wfdc15bQ9JHY4 80 aa11.76□□□□□ -0.53
Chd3-201ENSMUST00000092971 Higd2aQ9CQJ1 106 aa11.76□□□□□ -0.53
Chd3-201ENSMUST00000092971 Fam241bQ9D882 120 aa11.76□□□□□ -0.53
Chd3-201ENSMUST00000092971 Zswim8Q3UHH1 1832 aaKnown RBP11.76□□□□□ -0.53
Chd3-201ENSMUST00000092971 Gm37988J3QM41 62 aa11.76□□□□□ -0.53
Chd3-201ENSMUST00000092971 Sbf2E9PXF8 1872 aa11.76□□□□□ -0.53
Chd3-201ENSMUST00000092971 Ighv1-12A0A0A6YXJ9 117 aa11.76□□□□□ -0.53
Chd3-201ENSMUST00000092971 Trav11A0A0B4J1J9 114 aa11.75□□□□□ -0.53
Chd3-201ENSMUST00000092971 Fstl3Q9EQC7 256 aa11.75□□□□□ -0.53
Chd3-201ENSMUST00000092971 SonQ9QX47 2444 aaKnown RBP11.75□□□□□ -0.53
Chd3-201ENSMUST00000092971 Igkv3-4A0A140T8Q4 119 aa11.75□□□□□ -0.53
Chd3-201ENSMUST00000092971 Fgf6P21658 208 aa11.75□□□□□ -0.53
Chd3-201ENSMUST00000092971 Odf1Q61999 247 aa11.75□□□□□ -0.53
Chd3-201ENSMUST00000092971 Rspo1Q9Z132 265 aa11.75□□□□□ -0.53
Chd3-201ENSMUST00000092971 Sec61gP60060 68 aa11.74□□□□□ -0.53
Chd3-201ENSMUST00000092971 Ighv1-52A0A0A6YXC3 117 aa11.74□□□□□ -0.53
Chd3-201ENSMUST00000092971 Lyrm9Q3UN90 78 aa11.74□□□□□ -0.53
Chd3-201ENSMUST00000092971 Cox7b2Q9D2H1 82 aa11.74□□□□□ -0.53
Chd3-201ENSMUST00000092971 P01643 108 aa11.74□□□□□ -0.53
Chd3-201ENSMUST00000092971 Tm2d1Q99MB3 208 aa11.74□□□□□ -0.53
Chd3-201ENSMUST00000092971 Usf3B2RUQ2 2221 aa11.74□□□□□ -0.53
Chd3-201ENSMUST00000092971 LoxP28301 411 aa11.73□□□□□ -0.53
Chd3-201ENSMUST00000092971 Gm9913Q8BQQ2 135 aa11.73□□□□□ -0.53
Chd3-201ENSMUST00000092971 Atp5g3P56384 141 aa11.73□□□□□ -0.53
Chd3-201ENSMUST00000092971 Igkv1-117A0A140T8M0 119 aa11.72□□□□□ -0.53
Chd3-201ENSMUST00000092971 Cox17P56394 63 aa11.72□□□□□ -0.53
Chd3-201ENSMUST00000092971 Gm9949Q8C9F4 104 aa11.72□□□□□ -0.53
Chd3-201ENSMUST00000092971 P01756 117 aa11.72□□□□□ -0.53
Chd3-201ENSMUST00000092971 P01757 117 aa11.72□□□□□ -0.53
Chd3-201ENSMUST00000092971 H2al1aQ5M8Q2 105 aa11.72□□□□□ -0.53
Chd3-201ENSMUST00000092971 Srsf2Q62093 221 aaKnown RBP11.72□□□□□ -0.53
Chd3-201ENSMUST00000092971 H2al1eQ810S6 105 aa11.72□□□□□ -0.53
Chd3-201ENSMUST00000092971 Mlst8Q9DCJ1 326 aa11.72□□□□□ -0.53
Chd3-201ENSMUST00000092971 Gm17359A0A0G2JEB7 487 aa11.71□□□□□ -0.53
Chd3-201ENSMUST00000092971 P01745 121 aa11.71□□□□□ -0.53
Chd3-201ENSMUST00000092971 Gvin1Q80SU7 2427 aa11.71□□□□□ -0.53
Chd3-201ENSMUST00000092971 Trav12d-3A0A075B6A4 115 aa11.71□□□□□ -0.53
Chd3-201ENSMUST00000092971 Igkv1-110A0A0B4J1I0 119 aa11.71□□□□□ -0.54
Chd3-201ENSMUST00000092971 Gm10735Q3US96 136 aa11.71□□□□□ -0.54
Chd3-201ENSMUST00000092971 A730015C16RikQ8C992 119 aa11.71□□□□□ -0.54
Chd3-201ENSMUST00000092971 Igf2rQ07113 2483 aaKnown RBP11.71□□□□□ -0.54
Chd3-201ENSMUST00000092971 Ncor1Q60974 2453 aa11.7□□□□□ -0.54
Chd3-201ENSMUST00000092971 H2al1bA0A087WP11 105 aa11.7□□□□□ -0.54
Chd3-201ENSMUST00000092971 Vpreb2P13373 142 aa11.7□□□□□ -0.54
Chd3-201ENSMUST00000092971 Dido1Q8C9B9 2256 aaKnown RBP11.7□□□□□ -0.54
Chd3-201ENSMUST00000092971 ScxQ64124 207 aa11.7□□□□□ -0.54
Chd3-201ENSMUST00000092971 Lypd6Q8BPP5 171 aa11.7□□□□□ -0.54
Chd3-201ENSMUST00000092971 Defb13Q8R2I4 64 aa11.7□□□□□ -0.54
Chd3-201ENSMUST00000092971 Gm9936Q8C864 160 aa11.69□□□□□ -0.54
Chd3-201ENSMUST00000092971 Gm17677B3GLJ5 116 aa11.69□□□□□ -0.54
Chd3-201ENSMUST00000092971 Gm17521F6QAC8 156 aa11.69□□□□□ -0.54
Chd3-201ENSMUST00000092971 Lhfpl1Q80SV1 220 aa11.69□□□□□ -0.54
Chd3-201ENSMUST00000092971 Prr15lQ8JZM2 100 aa11.69□□□□□ -0.54
Chd3-201ENSMUST00000092971 Ndufb4Q9CQC7 129 aa11.69□□□□□ -0.54
Chd3-201ENSMUST00000092971 Rpl39lQ9CQD0 51 aa11.69□□□□□ -0.54
Chd3-201ENSMUST00000092971 4930535I16RikQ9CUI2 172 aa11.69□□□□□ -0.54
Chd3-201ENSMUST00000092971 Pglyrp1O88593 182 aa11.68□□□□□ -0.54
Chd3-201ENSMUST00000092971 P84751 237 aa11.68□□□□□ -0.54
Chd3-201ENSMUST00000092971 CrygcQ61597 174 aa11.68□□□□□ -0.54
Chd3-201ENSMUST00000092971 Ighv2-7A0A075B5Q8 116 aa11.68□□□□□ -0.54
Chd3-201ENSMUST00000092971 Trav9n-4A0A075B631 113 aa11.68□□□□□ -0.54
Chd3-201ENSMUST00000092971 Gp9O88186 177 aa11.68□□□□□ -0.54
Chd3-201ENSMUST00000092971 Cox7cP17665 63 aa11.68□□□□□ -0.54
Chd3-201ENSMUST00000092971 Igf1P05017 153 aa11.68□□□□□ -0.54
Chd3-201ENSMUST00000092971 Ralgapa2A3KGS3 1872 aa11.68□□□□□ -0.54
Chd3-201ENSMUST00000092971 U90926O08546 118 aa11.68□□□□□ -0.54
Chd3-201ENSMUST00000092971 Gphb5Q812B2 130 aa11.67□□□□□ -0.54
Chd3-201ENSMUST00000092971 2010109I03RikQ9CQ11 111 aa11.67□□□□□ -0.54
Chd3-201ENSMUST00000092971 Gm10638F6QEG2 257 aa11.67□□□□□ -0.54
Chd3-201ENSMUST00000092971 1500011B03RikQ3TTH7 73 aa11.67□□□□□ -0.54
Chd3-201ENSMUST00000092971 1810032O08RikE9PZV8 113 aa11.66□□□□□ -0.54
Chd3-201ENSMUST00000092971 ColqO35348 457 aa11.66□□□□□ -0.54
Chd3-201ENSMUST00000092971 Greb1Q3UHK3 1954 aa11.66□□□□□ -0.54
Chd3-201ENSMUST00000092971 Sec16aA2AIX1 2377 aa11.65□□□□□ -0.54
Chd3-201ENSMUST00000092971 Ncoa6Q9JL19 2067 aa11.65□□□□□ -0.54
Chd3-201ENSMUST00000092971 Wfdc11A2A5H7 82 aa11.65□□□□□ -0.54
Chd3-201ENSMUST00000092971 NrgnP60761 78 aa11.65□□□□□ -0.55
Chd3-201ENSMUST00000092971 Tet1Q3URK3 2007 aaKnown RBP11.64□□□□□ -0.55
Chd3-201ENSMUST00000092971 Col11a1Q61245 1804 aa11.64□□□□□ -0.55
Chd3-201ENSMUST00000092971 Gm10295Q8CCF3 114 aa11.64□□□□□ -0.55
Chd3-201ENSMUST00000092971 Q99M08 65 aa11.64□□□□□ -0.55
Chd3-201ENSMUST00000092971 Gm26602M0QWA4 95 aa11.64□□□□□ -0.55
Chd3-201ENSMUST00000092971 PscaP57096 123 aa11.64□□□□□ -0.55
Chd3-201ENSMUST00000092971 Plxnb1Q8CJH3 2119 aa11.63□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 55 ms