RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Rhox8Q6VSS7 320 aa26.68■■□□□ 1.86
Chd3-201ENSMUST00000092971 Ehmt2Q9Z148 1263 aaKnown RBP24.87■■□□□ 1.57
Chd3-201ENSMUST00000092971 Wdr66E9Q743 1299 aa24.14■■□□□ 1.45
Chd3-201ENSMUST00000092971 Rpgrip1Q9EPQ2 1331 aa24.08■■□□□ 1.45
Chd3-201ENSMUST00000092971 Cngb1E1AZ71 1325 aa24.05■■□□□ 1.44
Chd3-201ENSMUST00000092971 Las1lA2BE28 776 aaKnown RBP23.92■■□□□ 1.42
Chd3-201ENSMUST00000092971 Ube2uB1AUC4 352 aa23.86■■□□□ 1.41
Chd3-201ENSMUST00000092971 Zeb1Q64318 1117 aa23.82■■□□□ 1.4
Chd3-201ENSMUST00000092971 Pelp1Q9DBD5 1123 aaKnown RBP23.74■■□□□ 1.39
Chd3-201ENSMUST00000092971 Amer1Q7TS75 1132 aa23.64■■□□□ 1.38
Chd3-201ENSMUST00000092971 Ccdc136Q3TVA9 1136 aa23.49■■□□□ 1.35
Chd3-201ENSMUST00000092971 Gab3Q8BSM5 595 aa23.44■■□□□ 1.34
Chd3-201ENSMUST00000092971 Esf1Q3V1V3 845 aaKnown RBP23.38■■□□□ 1.33
Chd3-201ENSMUST00000092971 Myt1lP97500 1187 aa23.08■■□□□ 1.29
Chd3-201ENSMUST00000092971 Npm2Q80W85 207 aa23.07■■□□□ 1.28
Chd3-201ENSMUST00000092971 Slc24a1Q91WD8 1130 aa23.05■■□□□ 1.28
Chd3-201ENSMUST00000092971 Ttbk1Q6PCN3 1308 aa22.91■■□□□ 1.26
Chd3-201ENSMUST00000092971 CenpbP27790 599 aa22.88■■□□□ 1.25
Chd3-201ENSMUST00000092971 UbtfP25976 765 aaKnown RBP22.62■■□□□ 1.21
Chd3-201ENSMUST00000092971 Trim41Q5NCC3 630 aa22.61■■□□□ 1.21
Chd3-201ENSMUST00000092971 4930567H17RikQ3V0K5 233 aa22.49■■□□□ 1.19
Chd3-201ENSMUST00000092971 4933416C03RikQ3V063 378 aa22.42■■□□□ 1.18
Chd3-201ENSMUST00000092971 Ppargc1bQ8VHJ7 1014 aa22.29■■□□□ 1.16
Chd3-201ENSMUST00000092971 Stra8P70278 393 aa22.27■■□□□ 1.16
Chd3-201ENSMUST00000092971 Acin1Q9JIX8 1338 aaKnown RBP22.21■■□□□ 1.15
Chd3-201ENSMUST00000092971 Eif5bQ05D44 1216 aaKnown RBP22.2■■□□□ 1.14
Chd3-201ENSMUST00000092971 Neurod1Q60867 357 aa22.18■■□□□ 1.14
Chd3-201ENSMUST00000092971 NefmP08553 848 aa22.12■■□□□ 1.13
Chd3-201ENSMUST00000092971 Cdk11bP24788 784 aaKnown RBP22.08■■□□□ 1.13
Chd3-201ENSMUST00000092971 Il27Q8K3I6 234 aa21.97■■□□□ 1.11
Chd3-201ENSMUST00000092971 NrdcQ8BHG1 1161 aa21.96■■□□□ 1.11
Chd3-201ENSMUST00000092971 Ap3b1Q9Z1T1 1105 aa21.93■■□□□ 1.1
Chd3-201ENSMUST00000092971 Os9Q8K2C7 672 aa21.88■■□□□ 1.09
Chd3-201ENSMUST00000092971 Fam50aQ9WV03 339 aaKnown RBP21.87■■□□□ 1.09
Chd3-201ENSMUST00000092971 NeflP08551 543 aa21.87■■□□□ 1.09
Chd3-201ENSMUST00000092971 NclP09405 707 aaKnown RBP21.82■■□□□ 1.08
Chd3-201ENSMUST00000092971 Pcgf6Q99NA9 353 aa21.81■■□□□ 1.08
Chd3-201ENSMUST00000092971 Nop58Q6DFW4 536 aaKnown RBP21.79■■□□□ 1.08
Chd3-201ENSMUST00000092971 HrcG5E8J6 738 aa21.75■■□□□ 1.07
Chd3-201ENSMUST00000092971 Anp32bQ9EST5 272 aaKnown RBP21.72■■□□□ 1.07
Chd3-201ENSMUST00000092971 Myt1Q8CFC2 1127 aa21.71■■□□□ 1.07
Chd3-201ENSMUST00000092971 Tnnt3Q9QZ47 272 aa21.58■■□□□ 1.05
Chd3-201ENSMUST00000092971 Zbtb7cQ8VCZ7 619 aa21.55■■□□□ 1.04
Chd3-201ENSMUST00000092971 Supt5hO55201 1082 aaKnown RBP21.53■■□□□ 1.04
Chd3-201ENSMUST00000092971 Chic1Q8CBW7 227 aa21.52■■□□□ 1.04
Chd3-201ENSMUST00000092971 Zbtb4Q5F293 982 aa21.41■■□□□ 1.02
Chd3-201ENSMUST00000092971 DaxxO35613 739 aa21.39■■□□□ 1.02
Chd3-201ENSMUST00000092971 ArxO35085 564 aa21.38■■□□□ 1.01
Chd3-201ENSMUST00000092971 Gm38655A0A286YDK6 273 aa21.32■■□□□ 1
Chd3-201ENSMUST00000092971 Prdm10Q3UTQ7 1184 aa21.31■■□□□ 1
Chd3-201ENSMUST00000092971 TonslQ6NZL6 1363 aa21.28■■□□□ 1
Chd3-201ENSMUST00000092971 Mapk8ip2Q9ERE9 830 aa21.26■□□□□ 0.99
Chd3-201ENSMUST00000092971 NischQ80TM9 1593 aa21.23■□□□□ 0.99
Chd3-201ENSMUST00000092971 DiexfQ8BTT6 772 aaKnown RBP21.18■□□□□ 0.98
Chd3-201ENSMUST00000092971 Polr3glQ8R0C0 218 aa21.18■□□□□ 0.98
Chd3-201ENSMUST00000092971 Hnrnpul2Q00PI9 745 aaKnown RBP21.17■□□□□ 0.98
Chd3-201ENSMUST00000092971 Ifnlr1Q8CGK5 535 aa21.11■□□□□ 0.97
Chd3-201ENSMUST00000092971 Ythdc1E9Q5K9 736 aaKnown RBP21.08■□□□□ 0.97
Chd3-201ENSMUST00000092971 Lmod2Q3UHZ5 550 aa21.08■□□□□ 0.97
Chd3-201ENSMUST00000092971 Gm13697A2AK42 830 aa21.08■□□□□ 0.96
Chd3-201ENSMUST00000092971 Csrnp3P59055 597 aa21.07■□□□□ 0.96
Chd3-201ENSMUST00000092971 Rtl5Q5DTT4 599 aa21.05■□□□□ 0.96
Chd3-201ENSMUST00000092971 Mier1Q5UAK0 511 aa21.05■□□□□ 0.96
Chd3-201ENSMUST00000092971 Rangap1P46061 589 aaKnown RBP21.04■□□□□ 0.96
Chd3-201ENSMUST00000092971 Atp1b4Q99ME6 356 aa21.01■□□□□ 0.95
Chd3-201ENSMUST00000092971 Erich6D3Z6S9 713 aa20.98■□□□□ 0.95
Chd3-201ENSMUST00000092971 Nlrp6Q91WS2 869 aa20.95■□□□□ 0.94
Chd3-201ENSMUST00000092971 CatipB9EKE5 520 aa20.95■□□□□ 0.94
Chd3-201ENSMUST00000092971 Anp32aO35381 247 aa20.95■□□□□ 0.94
Chd3-201ENSMUST00000092971 Ccdc180J3QNE4 1664 aa20.92■□□□□ 0.94
Chd3-201ENSMUST00000092971 Lmod3E9QA62 571 aa20.9■□□□□ 0.94
Chd3-201ENSMUST00000092971 Plekhg3Q4VAC9 1341 aa20.89■□□□□ 0.93
Chd3-201ENSMUST00000092971 Plppr3Q7TPB0 716 aa20.84■□□□□ 0.93
Chd3-201ENSMUST00000092971 Eid3Q3V124 375 aa20.77■□□□□ 0.92
Chd3-201ENSMUST00000092971 Vsig10D3YX43 558 aa20.75■□□□□ 0.91
Chd3-201ENSMUST00000092971 Gm13695A2AK44 830 aa20.71■□□□□ 0.91
Chd3-201ENSMUST00000092971 ClspnQ80YR7 1315 aa20.69■□□□□ 0.9
Chd3-201ENSMUST00000092971 Zcchc6Q5BLK4 1491 aaKnown RBP20.64■□□□□ 0.89
Chd3-201ENSMUST00000092971 Fkbp15Q6P9Q6 1216 aaKnown RBP20.62■□□□□ 0.89
Chd3-201ENSMUST00000092971 Upf2A2AT37 1269 aaKnown RBP20.62■□□□□ 0.89
Chd3-201ENSMUST00000092971 Ppp4r2Q0VGB7 417 aa20.6■□□□□ 0.89
Chd3-201ENSMUST00000092971 Rad21Q61550 635 aaKnown RBP20.6■□□□□ 0.89
Chd3-201ENSMUST00000092971 DekQ7TNV0 380 aaKnown RBP20.55■□□□□ 0.88
Chd3-201ENSMUST00000092971 Sall2Q9QX96 1004 aa20.46■□□□□ 0.87
Chd3-201ENSMUST00000092971 Hsp90aa1P07901 733 aaKnown RBP20.44■□□□□ 0.86
Chd3-201ENSMUST00000092971 Npm1Q61937 292 aaKnown RBP20.44■□□□□ 0.86
Chd3-201ENSMUST00000092971 Gm35339A0A140LHH9 1649 aa20.42■□□□□ 0.86
Chd3-201ENSMUST00000092971 Calr4Q3TQS0 420 aa20.4■□□□□ 0.86
Chd3-201ENSMUST00000092971 Arid4bA2CG63 1314 aaKnown RBP20.4■□□□□ 0.86
Chd3-201ENSMUST00000092971 Trim26Q99PN3 545 aa20.4■□□□□ 0.86
Chd3-201ENSMUST00000092971 Irx6Q9ER75 438 aa20.32■□□□□ 0.84
Chd3-201ENSMUST00000092971 Rtl1Q7M732 1744 aa20.3■□□□□ 0.84
Chd3-201ENSMUST00000092971 Anks4bQ8K3X6 423 aa20.25■□□□□ 0.83
Chd3-201ENSMUST00000092971 Abcc9P70170 1546 aa20.22■□□□□ 0.83
Chd3-201ENSMUST00000092971 Fgd1P52734 960 aa20.22■□□□□ 0.83
Chd3-201ENSMUST00000092971 Wdr43Q6ZQL4 677 aaKnown RBP20.19■□□□□ 0.82
Chd3-201ENSMUST00000092971 Chic2Q9D9G3 165 aa20.18■□□□□ 0.82
Chd3-201ENSMUST00000092971 Trim44Q9QXA7 346 aa20.18■□□□□ 0.82
Chd3-201ENSMUST00000092971 Mrs2Q5NCE8 434 aa20.18■□□□□ 0.82
Chd3-201ENSMUST00000092971 Aplp2Q06335 707 aa20.12■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms