RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 MsmbO08540 113 aa7.4□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 MdfiP70331 251 aa7.4□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Egr2P08152 470 aa7.39□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Myo18bE9PV66 2605 aa7.39□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Gm7849D3YX03 116 aa7.39□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Gata3P23772 443 aa7.39□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Anapc13Q8R034 74 aa7.39□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 P01643 108 aa7.39□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 TshbP12656 138 aa7.39□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Foxi2Q3I5G5 311 aa7.39□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Vwc2lQ505H4 222 aa7.39□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Olfr311Q5NC59 308 aa7.39□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Gm6812B1AXU1 112 aa7.38□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 1700020N15RikL7MTX3 112 aa7.38□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 4930596D02RikQ3V0H9 216 aa7.38□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Spata45Q9CVW4 97 aa7.38□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Cep192E9Q4Y4 2514 aaKnown RBP7.38□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Ighv1-64A0A075B5X3 117 aa7.38□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Igkv4-74A0A0B4J1I3 119 aa7.38□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 OdaphJ3QNT8 126 aa7.38□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 AW146154Q3TPQ7 468 aa7.38□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Cysltr1Q99JA4 352 aa7.38□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Avpi1Q9D7H4 142 aa7.38□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Gcn1E9PVA8 2671 aaKnown RBP7.38□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Ighv1-50A0A075B5W1 117 aa7.38□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Ccl25O35903 144 aa7.38□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Pla2g2cP48076 150 aa7.38□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Gata4Q08369 441 aa7.38□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Gm94Q3V2D2 93 aa7.38□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Ighv1-53A0A075B5W3 117 aa7.37□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Odf3Q920N1 254 aa7.37□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 4930544G11RikQ9CR99 193 aa7.37□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Gemin7Q9CWY4 129 aa7.37□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Notch2O35516 2470 aa7.37□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Znf575Q3TXZ1 239 aa7.37□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Cox11Q6P8I6 275 aa7.37□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Lama5Q61001 3718 aa7.37□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 TtrP07309 147 aa7.37□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Spink1P09036 80 aa7.37□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Cox7cP17665 63 aa7.37□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 LbhQ9CX60 105 aa7.37□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Ankrd39Q9D2X0 183 aa7.37□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Pla2g2dQ9WVF6 144 aa7.37□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Ighv1-82A0A0G2JEU7 117 aa7.36□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 A130051J06RikQ8CAU1 227 aa7.36□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Tac4Q99N14 128 aa7.36□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Dpm2Q9Z324 84 aa7.36□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Gm2564F6Z9S8 108 aa7.36□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Lect2O88803 151 aa7.36□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Trav9-2A0A075B647 113 aa7.36□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Gm29423A0A087WRM1 55 aa7.36□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Trav9-4A0A0B4J1K2 113 aa7.36□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 F11rO88792 300 aa7.36□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 P06328 117 aa7.36□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Dmrt3Q80WT2 476 aa7.36□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Unc79Q0KK59 2596 aa7.36□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Hcfc1Q61191 2045 aaKnown RBP7.35□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Trdv5A0A075B661 115 aa7.35□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Ighv1-12A0A0A6YXJ9 117 aa7.35□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 C920008G01RikA0A0B4J1N1 112 aa7.35□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Gm5878E9PUB3 99 aa7.35□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 P01820 115 aa7.35□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Trav3-1Q5R1I8 114 aa7.35□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Sigmar1O55242 223 aa7.35□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Pip4p1Q3TWL2 284 aa7.35□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Trav7d-3Q5R1I1 112 aa7.35□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Samd10Q7TST3 202 aa7.35□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Gm20730A0A075B5J6 119 aa7.35□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Gm5819E9PZ96 154 aa7.35□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 1700056E22RikF7CNM6 234 aa7.35□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 P01837 106 aa7.35□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Ube2e2Q91W82 201 aa7.35□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Shisa9Q9CZN4 424 aa7.35□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Ighv1-58A0A075B5W9 117 aa7.34□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Hivep3A2A884 2348 aa7.34□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Scgb1b24B1B0N6 92 aa7.34□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Gm14137Q8CE97 175 aa7.34□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Prp2P05143 317 aa7.34□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Cks1bP61025 79 aa7.34□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 SNORCQ9CXL7 121 aa7.34□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Ndufs7Q9DC70 224 aa7.34□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Setd2E9Q5F9 2537 aa7.34□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Gm21994F6T2D2 329 aa7.34□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Defb47Q30KN1 79 aa7.34□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Xlr5cQ9JJR2 179 aa7.34□□□□□ -1.23
Pcdh1-201ENSMUST00000057185 Clec5aQ9R007 190 aa7.33□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Triap1Q9D8Z2 76 aa7.33□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 C2cd3Q52KB6 2323 aa7.33□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Igkv4-59A0A0B4J1I8 117 aa7.33□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Gm5629P06327 117 aa7.33□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 C1qcQ02105 246 aa7.33□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Trav2Q5R1I9 109 aa7.33□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Ndufb4Q9CQC7 129 aa7.33□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Phlda3Q9WV95 125 aa7.33□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 P01753 117 aa7.33□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Hoxd3P09027 433 aa7.33□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Epg5Q80TA9 2572 aa7.32□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Gm17455G3UW87 128 aa7.32□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Cited2O35740 269 aa7.32□□□□□ -1.24
Pcdh1-201ENSMUST00000057185 Fam19a4Q7TPG5 135 aa7.32□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 71.2 ms