RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Wisp3D3Z5L9 354 aa13.74□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Tax1bp3Q9DBG9 124 aa13.74□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Igkv3-10A0A0G2JGN0 119 aa13.74□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Gm10638F6QEG2 257 aa13.73□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Gm5941Q497P9 117 aa13.73□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Ormdl1Q921I0 153 aa13.73□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Gm28539A0A087WSL9 92 aa13.73□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Igkv3-5A0A140T8M6 119 aa13.73□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Zc2hc1aQ8BJH1 324 aa13.73□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Gm4861Q8C5A4 106 aa13.73□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Ighv5-8A0A075B676 92 aa13.72□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Gm21994F6T2D2 329 aa13.72□□□□□ -0.21
Pcf11-201ENSMUST00000119954 7420426K07RikQ3UX66 186 aa13.72□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Sox16Q62247 57 aa13.72□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Myo9bQ9QY06 2114 aa13.72□□□□□ -0.21
Pcf11-201ENSMUST00000119954 4933414I15RikQ9D4D5 133 aa13.72□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Ighv1-4A0A075B5T4 117 aa13.72□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Gm17472A0A075B683 117 aa13.72□□□□□ -0.21
Pcf11-201ENSMUST00000119954 CrygdP04342 174 aa13.72□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Igf1P05017 153 aa13.72□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Naa38Q9D2U5 125 aa13.72□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Trav9d-3A0A075B695 113 aa13.71□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Gm37988J3QM41 62 aa13.71□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Fam208bQ5DTT3 2382 aa13.71□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Igkv8-18A0A0B4J1J3 123 aa13.71□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Pkd1l3Q2EG98 2201 aa13.71□□□□□ -0.21
Pcf11-201ENSMUST00000119954 Fam110aQ8R184 296 aa13.71□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Tmem210Q9D2F0 147 aa13.71□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Malrd1A2AJX4 2123 aa13.71□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Tnrc6aQ3UHK8 1896 aaKnown RBP13.71□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Gm10518F6UQQ9 182 aa13.7□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Vpreb3D3Z6J4 130 aa13.7□□□□□ -0.22
Pcf11-201ENSMUST00000119954 1500011B03RikQ3TTH7 73 aa13.7□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Gm17677B3GLJ5 116 aa13.7□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Dmrtc1c1Q9D410 238 aa13.7□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Dock1Q8BUR4 1865 aa13.7□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Zfp236S4R299 1847 aa13.7□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Gm12353A2AGJ4 60 aa13.7□□□□□ -0.22
Pcf11-201ENSMUST00000119954 P01750 117 aa13.7□□□□□ -0.22
Pcf11-201ENSMUST00000119954 PtprdQ64487 1912 aa13.69□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Fstl3Q9EQC7 256 aa13.69□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Wdr81Q5ND34 1934 aa13.69□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Loxl1P97873 607 aa13.69□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Gp9O88186 177 aa13.68□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Rspo1Q9Z132 265 aa13.68□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Vpreb1P13372 142 aa13.68□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Mrpl35Q9CQL6 188 aa13.68□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Dock7Q8R1A4 2130 aaKnown RBP13.68□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Igkv2-109A0A075B5K6 120 aa13.68□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Odf1Q61999 247 aa13.68□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Zswim8Q3UHH1 1832 aaKnown RBP13.68□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Tm2d2Q8R0I4 213 aa13.67□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Fam19a4Q7TPG5 135 aa13.67□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Trav13n-1A0A0G2JEU8 110 aa13.67□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Igkv6-15A0A140T8M5 115 aa13.67□□□□□ -0.22
Pcf11-201ENSMUST00000119954 OdaphJ3QNT8 126 aa13.67□□□□□ -0.22
Pcf11-201ENSMUST00000119954 NpyP57774 97 aa13.67□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Gm9970F6ZED4 185 aa13.67□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Pde6gP09174 87 aa13.67□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Q08AU9 97 aa13.66□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Trbv13-1A0A0B4J1P8 112 aa13.66□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Sec61gP60060 68 aa13.66□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Trav9n-2A0A0G2JDP3 113 aa13.66□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Pglyrp1O88593 182 aa13.66□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Gm9913Q8BQQ2 135 aa13.66□□□□□ -0.22
Pcf11-201ENSMUST00000119954 P0C913 63 aa13.66□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Rpl39P62892 51 aa13.66□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Ccl24Q9JKC0 119 aa13.66□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Gm3618D3Z4P5 127 aa13.65□□□□□ -0.22
Pcf11-201ENSMUST00000119954 P01753 117 aa13.65□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Gata3P23772 443 aa13.65□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Tm2d1Q99MB3 208 aa13.65□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Ndufc1Q9CQY9 76 aa13.65□□□□□ -0.22
Pcf11-201ENSMUST00000119954 Pla2g2aP31482 146 aa13.65□□□□□ -0.22
Pcf11-201ENSMUST00000119954 1700010B08RikQ9DAI7 102 aa13.65□□□□□ -0.22
Pcf11-201ENSMUST00000119954 U90926O08546 118 aa13.65□□□□□ -0.22
Pcf11-201ENSMUST00000119954 9430069I07RikQ9CX21 111 aa13.64□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Ighv1-52A0A0A6YXC3 117 aa13.64□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Ube2aQ9Z255 152 aa13.64□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Cfap126Q6P8X9 189 aa13.64□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Gtf3c1Q8K284 2101 aa13.64□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Ndufs5Q99LY9 106 aa13.64□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Ttc6G3UYY4 1857 aa13.63□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Igkv1-35A0A0G2JDE5 120 aa13.63□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Asxl3Q8C4A5 2259 aa13.63□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Gm42674D3YUT9 64 aa13.63□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Znf672Q99LH4 468 aa13.63□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Klk12B2RVZ0 247 aa13.63□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Fgf6P21658 208 aa13.63□□□□□ -0.23
Pcf11-201ENSMUST00000119954 9530003J23RikQ8BM26 151 aa13.63□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Brca1P48754 1812 aa13.63□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Sipa1l3G3X9J0 1776 aa13.63□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Gm37389A0A0A6YW05 95 aa13.62□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Trav13n-2A0A0G2JF93 110 aa13.62□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Q99M08 65 aa13.62□□□□□ -0.23
Pcf11-201ENSMUST00000119954 P04945 108 aa13.62□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Trav13-2A0A075B649 110 aa13.61□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Ighv1-12A0A0A6YXJ9 117 aa13.61□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Gm10553J3QPF1 123 aa13.61□□□□□ -0.23
Pcf11-201ENSMUST00000119954 Igkv1-88A0A140T8N1 120 aa13.61□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 67.4 ms