RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B PSP1P50896 841 aaKnown RBP1□□□□□ -2.25
snR39BsnR39B ARA2Q04212 335 aa1□□□□□ -2.25
snR39BsnR39B YMR254CQ04838 102 aa1□□□□□ -2.25
snR39BsnR39B YCG1Q06680 1035 aa1□□□□□ -2.25
snR39BsnR39B RPS17AP02407 136 aaKnown RBP0.99□□□□□ -2.25
snR39BsnR39B CHO2P05374 869 aaKnown RBP0.99□□□□□ -2.25
snR39BsnR39B RPL42AP0CX27 106 aaKnown RBP0.99□□□□□ -2.25
snR39BsnR39B RPL42BP0CX28 106 aaKnown RBP0.99□□□□□ -2.25
snR39BsnR39B RPS17BP14127 136 aaKnown RBP0.99□□□□□ -2.25
snR39BsnR39B GDA1P32621 518 aa0.99□□□□□ -2.25
snR39BsnR39B PAM1P37304 830 aaKnown RBP0.99□□□□□ -2.25
snR39BsnR39B MNN2P38069 597 aa0.99□□□□□ -2.25
snR39BsnR39B EHT1P38295 451 aa0.99□□□□□ -2.25
snR39BsnR39B YHR218WP38899 603 aa0.99□□□□□ -2.25
snR39BsnR39B SWI6P09959 803 aa0.98□□□□□ -2.25
snR39BsnR39B MSH1P25846 959 aa0.98□□□□□ -2.25
snR39BsnR39B SEC1P30619 724 aaKnown RBP0.98□□□□□ -2.25
snR39BsnR39B RPN2P32565 945 aaKnown RBP0.98□□□□□ -2.25
snR39BsnR39B DSS4P32601 143 aa0.98□□□□□ -2.25
snR39BsnR39B RAD24P32641 659 aa0.98□□□□□ -2.25
snR39BsnR39B PBP2P38151 413 aaKnown RBP RIP-Chip data0.98□□□□□ -2.25not detected
snR39BsnR39B YBP1P38315 674 aa0.98□□□□□ -2.25
snR39BsnR39B SDH8P38345 138 aa0.98□□□□□ -2.25
snR39BsnR39B ERV46P39727 415 aa0.98□□□□□ -2.25
snR39BsnR39B TPA1P40032 644 aaKnown RBP0.98□□□□□ -2.25
snR39BsnR39B YPI1P43587 155 aa0.98□□□□□ -2.25
snR39BsnR39B ATG27P46989 271 aa0.98□□□□□ -2.25
snR39BsnR39B UBP8P50102 471 aa0.98□□□□□ -2.25
snR39BsnR39B PLM2Q04383 521 aa0.98□□□□□ -2.25
snR39BsnR39B RAD34Q06665 692 aa0.98□□□□□ -2.25
snR39BsnR39B POS5Q06892 414 aa0.98□□□□□ -2.25
snR39BsnR39B HNM1P19807 563 aa0.97□□□□□ -2.25
snR39BsnR39B SFL1P20134 766 aa0.97□□□□□ -2.25
snR39BsnR39B SFP1P32432 683 aa0.97□□□□□ -2.25
snR39BsnR39B SIM1P40472 476 aa0.97□□□□□ -2.25
snR39BsnR39B IES1P43579 692 aa0.97□□□□□ -2.25
snR39BsnR39B NOP15P53927 220 aaPredicted RBP0.97□□□□□ -2.25
snR39BsnR39B YAT1P80235 687 aa0.97□□□□□ -2.25
snR39BsnR39B ACS1Q01574 713 aa0.97□□□□□ -2.25
snR39BsnR39B APL5Q08951 932 aaKnown RBP0.97□□□□□ -2.25
snR39BsnR39B RTC1Q08281 1341 aa0.96□□□□□ -2.26
snR39BsnR39B HMG2P12684 1045 aa0.96□□□□□ -2.26
snR39BsnR39B RRP43P25359 394 aaPredicted RBP0.96□□□□□ -2.26
snR39BsnR39B RPS2P25443 254 aaKnown RBP0.96□□□□□ -2.26
snR39BsnR39B SRO77P38163 1010 aa0.96□□□□□ -2.26
snR39BsnR39B EFM2P38347 419 aa0.96□□□□□ -2.26
snR39BsnR39B YHR033WP38690 423 aa0.96□□□□□ -2.26
snR39BsnR39B KRE9P39005 276 aa0.96□□□□□ -2.26
snR39BsnR39B VPS8P39702 1274 aa0.96□□□□□ -2.26
snR39BsnR39B ASG1P40467 964 aa0.96□□□□□ -2.26
snR39BsnR39B SPG5P42933 373 aa0.96□□□□□ -2.26
snR39BsnR39B SNU71P53207 620 aaKnown RBP0.96□□□□□ -2.26
snR39BsnR39B YNL181WP53878 407 aa0.96□□□□□ -2.26
snR39BsnR39B UGO1Q03327 502 aa0.96□□□□□ -2.26
snR39BsnR39B IZH1Q03419 316 aa0.96□□□□□ -2.26
snR39BsnR39B ARP9Q05123 467 aa0.96□□□□□ -2.26
snR39BsnR39B PSR2Q07949 397 aa0.96□□□□□ -2.26
snR39BsnR39B STI1P15705 589 aaKnown RBP RIP-Chip data0.95□□□□□ -2.26not detected
snR39BsnR39B PDA1P16387 420 aaKnown RBP0.95□□□□□ -2.26
snR39BsnR39B TRS65P32893 560 aa0.95□□□□□ -2.26
snR39BsnR39B MTC6P38849 526 aa0.95□□□□□ -2.26
snR39BsnR39B LNP1P38878 278 aa0.95□□□□□ -2.26
snR39BsnR39B RET2P43621 546 aa0.95□□□□□ -2.26
snR39BsnR39B YJL132WP47014 750 aa0.95□□□□□ -2.26
snR39BsnR39B BOR1P53838 576 aa0.95□□□□□ -2.26
snR39BsnR39B ESBP6P53918 673 aa0.95□□□□□ -2.26
snR39BsnR39B CAC2Q04199 468 aa0.95□□□□□ -2.26
snR39BsnR39B SWF1Q04629 336 aa0.95□□□□□ -2.26
snR39BsnR39B GUD1Q07729 489 aa0.95□□□□□ -2.26
snR39BsnR39B YLR001CQ07895 862 aa0.95□□□□□ -2.26
snR39BsnR39B YPL191CQ08930 360 aa0.95□□□□□ -2.26
snR39BsnR39B DAP1Q12091 152 aa0.95□□□□□ -2.26
snR39BsnR39B LCB4Q12246 624 aa0.95□□□□□ -2.26
snR39BsnR39B ILV2P07342 687 aaKnown RBP0.94□□□□□ -2.26
snR39BsnR39B GUK1P15454 187 aaKnown RBP0.94□□□□□ -2.26
snR39BsnR39B KGD2P19262 463 aaPredicted RBP0.94□□□□□ -2.26
snR39BsnR39B AEP2P22136 580 aa0.94□□□□□ -2.26
snR39BsnR39B AMD2P22580 549 aa0.94□□□□□ -2.26
snR39BsnR39B MSH2P25847 964 aa0.94□□□□□ -2.26
snR39BsnR39B HXT1P32465 570 aa0.94□□□□□ -2.26
snR39BsnR39B TIM23P32897 222 aa0.94□□□□□ -2.26
snR39BsnR39B OCT1P35999 772 aa0.94□□□□□ -2.26
snR39BsnR39B RIM2P38127 377 aa0.94□□□□□ -2.26
snR39BsnR39B TDA3P38758 523 aa0.94□□□□□ -2.26
snR39BsnR39B SAP1P39955 897 aaKnown RBP0.94□□□□□ -2.26
snR39BsnR39B IML2P47031 731 aa0.94□□□□□ -2.26
snR39BsnR39B MET13P53128 600 aa0.94□□□□□ -2.26
snR39BsnR39B SQS1P53866 767 aaKnown RBP0.94□□□□□ -2.26
snR39BsnR39B UBP16Q02863 499 aa0.94□□□□□ -2.26
snR39BsnR39B YML119WQ03208 357 aa0.94□□□□□ -2.26
snR39BsnR39B NSE3Q05541 303 aa0.94□□□□□ -2.26
snR39BsnR39B PDR8Q06149 701 aa0.94□□□□□ -2.26
snR39BsnR39B DIN7Q12086 430 aa0.94□□□□□ -2.26
snR39BsnR39B YLR112WQ12130 139 aa0.94□□□□□ -2.26
snR39BsnR39B CDC26P14724 124 aa0.93□□□□□ -2.26
snR39BsnR39B SWC3P31376 625 aa0.93□□□□□ -2.26
snR39BsnR39B MDM31P38880 579 aa0.93□□□□□ -2.26
snR39BsnR39B VPS41P38959 992 aa0.93□□□□□ -2.26
snR39BsnR39B RBG2P53295 368 aaKnown RBP0.93□□□□□ -2.26
snR39BsnR39B THI3Q07471 609 aa0.93□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms