RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeast

Gene SNF8, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF8	YPL002C	CCH1	P50077	2039 aa		4.63	□□□□□ -1.67
SNF8	YPL002C	KIN82	P25341	720 aa		4.63	□□□□□ -1.67
SNF8	YPL002C	MRPL7	P36519	292 aa		4.63	□□□□□ -1.67
SNF8	YPL002C	NDT80	P38830	627 aa		4.63	□□□□□ -1.67
SNF8	YPL002C	NUP60	P39705	539 aa		4.63	□□□□□ -1.67
SNF8	YPL002C	GDH3	P39708	457 aa		4.63	□□□□□ -1.67
SNF8	YPL002C	MOB1	P40484	314 aa		4.63	□□□□□ -1.67
SNF8	YPL002C	ALT2	P52892	507 aa		4.63	□□□□□ -1.67
SNF8	YPL002C	FHN1	P53279	174 aa		4.63	□□□□□ -1.67
SNF8	YPL002C	CWC22	P53333	577 aa	Known RBP	4.63	□□□□□ -1.67
SNF8	YPL002C	MDM1	Q01846	1127 aa		4.63	□□□□□ -1.67
SNF8	YPL002C	CTK1	Q03957	528 aa	Known RBP	4.63	□□□□□ -1.67
SNF8	YPL002C	THI7	Q05998	598 aa		4.63	□□□□□ -1.67
SNF8	YPL002C	VIP1	Q06685	1146 aa	Known RBP	4.63	□□□□□ -1.67
SNF8	YPL002C	MLH3	Q12083	715 aa		4.63	□□□□□ -1.67
SNF8	YPL002C	SNF1	P06782	633 aa	Known RBP	4.62	□□□□□ -1.67
SNF8	YPL002C	CUP1-1	P0CX80	61 aa		4.62	□□□□□ -1.67
SNF8	YPL002C	CUP1-2	P0CX81	61 aa		4.62	□□□□□ -1.67
SNF8	YPL002C	SPO11	P23179	398 aa		4.62	□□□□□ -1.67
SNF8	YPL002C	PUP3	P25451	205 aa	Known RBP	4.62	□□□□□ -1.67
SNF8	YPL002C	PHO11	P35842	467 aa		4.62	□□□□□ -1.67
SNF8	YPL002C	PHO12	P38693	467 aa		4.62	□□□□□ -1.67
SNF8	YPL002C	YEL025C	P39991	1188 aa		4.62	□□□□□ -1.67
SNF8	YPL002C	MAL11	P53048	616 aa		4.62	□□□□□ -1.67
SNF8	YPL002C	APM1	Q00776	475 aa	Predicted RBP	4.62	□□□□□ -1.67
SNF8	YPL002C	MFB1	Q04922	465 aa		4.62	□□□□□ -1.67
SNF8	YPL002C	CDC53	Q12018	815 aa	Known RBP	4.62	□□□□□ -1.67
SNF8	YPL002C	MAK31	P23059	88 aa		4.61	□□□□□ -1.67
SNF8	YPL002C	ADK2	P26364	225 aa		4.61	□□□□□ -1.67
SNF8	YPL002C	MTC2	P34246	357 aa		4.61	□□□□□ -1.67
SNF8	YPL002C	GLG1	P36143	616 aa		4.61	□□□□□ -1.67
SNF8	YPL002C	TRZ1	P36159	838 aa	Predicted RBP	4.61	□□□□□ -1.67
SNF8	YPL002C	BDH2	P39713	417 aa		4.61	□□□□□ -1.67
SNF8	YPL002C	YEL020C	P39994	560 aa		4.61	□□□□□ -1.67
SNF8	YPL002C	ARG2	P40360	574 aa		4.61	□□□□□ -1.67
SNF8	YPL002C	ESL1	P40456	1118 aa		4.61	□□□□□ -1.67
SNF8	YPL002C	CTR1	P49573	406 aa		4.61	□□□□□ -1.67
SNF8	YPL002C	YNL134C	P53912	376 aa	Known RBP	4.61	□□□□□ -1.67
SNF8	YPL002C	MYO5	Q04439	1219 aa	Known RBP	4.61	□□□□□ -1.67
SNF8	YPL002C	SPN1	Q06505	410 aa	Predicted RBP	4.61	□□□□□ -1.67
SNF8	YPL002C	RLP24	Q07915	199 aa	Known RBP	4.61	□□□□□ -1.67
SNF8	YPL002C	IRA1	P18963	3092 aa		4.6	□□□□□ -1.67
SNF8	YPL002C	ERR1	P0CX10	437 aa		4.6	□□□□□ -1.67
SNF8	YPL002C	ERR2	P0CX11	437 aa		4.6	□□□□□ -1.67
SNF8	YPL002C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
SNF8	YPL002C	MIP6	P38760	659 aa	Known RBP	4.6	□□□□□ -1.67
SNF8	YPL002C	CRG1	P38892	291 aa	RIP-Chip data	4.6	□□□□□ -1.67	not detected
SNF8	YPL002C	GET2	P40056	285 aa		4.6	□□□□□ -1.67
SNF8	YPL002C	YTA12	P40341	825 aa		4.6	□□□□□ -1.67
SNF8	YPL002C	YFL052W	P43551	465 aa		4.6	□□□□□ -1.67
SNF8	YPL002C	BNA2	P47125	453 aa		4.6	□□□□□ -1.67
SNF8	YPL002C	ORC4	P54791	529 aa		4.6	□□□□□ -1.67
SNF8	YPL002C	HOF1	Q05080	669 aa		4.6	□□□□□ -1.67
SNF8	YPL002C	DSE3	Q08729	430 aa		4.6	□□□□□ -1.67
SNF8	YPL002C	RRD2	Q12461	358 aa		4.6	□□□□□ -1.67
SNF8	YPL002C	RPL40A	P0CH08	128 aa	Known RBP	4.59	□□□□□ -1.67
SNF8	YPL002C	RPL40B	P0CH09	128 aa	Known RBP	4.59	□□□□□ -1.67
SNF8	YPL002C	RFS1	P38234	210 aa	Known RBP	4.59	□□□□□ -1.67
SNF8	YPL002C	RFC1	P38630	861 aa	Known RBP	4.59	□□□□□ -1.67
SNF8	YPL002C	ARP1	P38696	384 aa		4.59	□□□□□ -1.67
SNF8	YPL002C	ZPR1	P53303	486 aa	Known RBP	4.59	□□□□□ -1.67
SNF8	YPL002C	MCM21	Q06675	368 aa		4.59	□□□□□ -1.67
SNF8	YPL002C	CRD1	Q07560	283 aa		4.59	□□□□□ -1.67
SNF8	YPL002C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
SNF8	YPL002C	AFT2	Q08957	416 aa		4.59	□□□□□ -1.67
SNF8	YPL002C	HFI1	Q12060	488 aa		4.59	□□□□□ -1.67
SNF8	YPL002C	HIF1	Q12373	385 aa		4.59	□□□□□ -1.67
SNF8	YPL002C	ARP6	Q12509	438 aa		4.59	□□□□□ -1.67
SNF8	YPL002C	PCD1	Q12524	340 aa		4.59	□□□□□ -1.67
SNF8	YPL002C	APE1	P14904	514 aa		4.58	□□□□□ -1.68
SNF8	YPL002C	SRP54	P20424	541 aa	Known RBP	4.58	□□□□□ -1.68
SNF8	YPL002C	MIH1	P23748	554 aa		4.58	□□□□□ -1.68
SNF8	YPL002C	TOA1	P32773	286 aa		4.58	□□□□□ -1.68
SNF8	YPL002C	APT2	P36973	181 aa		4.58	□□□□□ -1.68
SNF8	YPL002C	YHL026C	P38740	315 aa		4.58	□□□□□ -1.68
SNF8	YPL002C	YGL081W	P53156	320 aa		4.58	□□□□□ -1.68
SNF8	YPL002C	ATG4	P53867	494 aa		4.58	□□□□□ -1.68
SNF8	YPL002C	YLR422W	Q06409	1932 aa		4.58	□□□□□ -1.68
SNF8	YPL002C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
SNF8	YPL002C	THR1	P17423	357 aa	Known RBP	4.57	□□□□□ -1.68
SNF8	YPL002C	TPM1	P17536	199 aa	Known RBP	4.57	□□□□□ -1.68
SNF8	YPL002C	YKL097C	P34245	136 aa		4.57	□□□□□ -1.68
SNF8	YPL002C	YKR051W	P36142	418 aa		4.57	□□□□□ -1.68
SNF8	YPL002C	YHR202W	P38887	602 aa		4.57	□□□□□ -1.68
SNF8	YPL002C	CSM2	P40465	213 aa		4.57	□□□□□ -1.68
SNF8	YPL002C	MAF1	P41910	395 aa		4.57	□□□□□ -1.68
SNF8	YPL002C	SAD1	P43589	448 aa		4.57	□□□□□ -1.68
SNF8	YPL002C	NPY1	P53164	384 aa		4.57	□□□□□ -1.68
SNF8	YPL002C	CNM67	P53865	581 aa	Known RBP	4.57	□□□□□ -1.68
SNF8	YPL002C	HMO1	Q03973	246 aa	Known RBP	4.57	□□□□□ -1.68
SNF8	YPL002C	PHM6	Q05637	104 aa		4.57	□□□□□ -1.68
SNF8	YPL002C	MRI1	Q06489	411 aa	Known RBP	4.57	□□□□□ -1.68
SNF8	YPL002C	USV1	Q12132	391 aa		4.57	□□□□□ -1.68
SNF8	YPL002C	GCN1	P33892	2672 aa	Known RBP	4.57	□□□□□ -1.68
SNF8	YPL002C	RPN13	O13563	156 aa		4.56	□□□□□ -1.68
SNF8	YPL002C	PGK1	P00560	416 aa	Known RBP	4.56	□□□□□ -1.68
SNF8	YPL002C	CDC9	P04819	755 aa		4.56	□□□□□ -1.68
SNF8	YPL002C	WHI2	P12611	486 aa		4.56	□□□□□ -1.68
SNF8	YPL002C	RNR1	P21524	888 aa	Known RBP	4.56	□□□□□ -1.68
SNF8	YPL002C	IMP2'	P32351	346 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 11 ms