RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C SNU56Q03782 492 aaKnown RBP8.78□□□□□ -1
RPD3YNL330C DOT1Q04089 582 aaKnown RBP8.78□□□□□ -1
RPD3YNL330C RSA3Q05942 220 aaKnown RBP8.78□□□□□ -1
RPD3YNL330C ATG17Q06410 417 aa8.78□□□□□ -1
RPD3YNL330C AAD15Q08361 143 aa8.78□□□□□ -1
RPD3YNL330C APC5Q08683 685 aa8.78□□□□□ -1
RPD3YNL330C STE6P12866 1290 aa8.77□□□□□ -1.01
RPD3YNL330C POX1P13711 748 aa8.77□□□□□ -1.01
RPD3YNL330C AFT1P22149 690 aa8.77□□□□□ -1.01
RPD3YNL330C AMD2P22580 549 aa8.77□□□□□ -1.01
RPD3YNL330C RAD51P25454 400 aa8.77□□□□□ -1.01
RPD3YNL330C YCL068CP25593 260 aa8.77□□□□□ -1.01
RPD3YNL330C MSH2P25847 964 aa8.77□□□□□ -1.01
RPD3YNL330C MSS51P32335 436 aa8.77□□□□□ -1.01
RPD3YNL330C PCS60P38137 543 aaKnown RBP RIP-Chip data8.77□□□□□ -1.01 RIP-Chip
RPD3YNL330C UBP14P38237 781 aaKnown RBP8.77□□□□□ -1.01
RPD3YNL330C BIT2P38346 545 aa8.77□□□□□ -1.01
RPD3YNL330C KSP1P38691 1029 aaKnown RBP8.77□□□□□ -1.01
RPD3YNL330C NMD3P38861 518 aaKnown RBP8.77□□□□□ -1.01
RPD3YNL330C YER186CP40101 306 aa8.77□□□□□ -1.01
RPD3YNL330C TRF5P48561 642 aaKnown RBP8.77□□□□□ -1.01
RPD3YNL330C AZR1P50080 613 aa8.77□□□□□ -1.01
RPD3YNL330C SCS3P53012 380 aa8.77□□□□□ -1.01
RPD3YNL330C YGR127WP53275 312 aa8.77□□□□□ -1.01
RPD3YNL330C PXR1P53335 271 aaPredicted RBP8.77□□□□□ -1.01
RPD3YNL330C MUB1Q03162 620 aa8.77□□□□□ -1.01
RPD3YNL330C SKY1Q03656 742 aa8.77□□□□□ -1.01
RPD3YNL330C CDC123Q05791 360 aa8.77□□□□□ -1.01
RPD3YNL330C RSC2Q06488 889 aa8.77□□□□□ -1.01
RPD3YNL330C ADF1Q2V2Q1 113 aa8.77□□□□□ -1.01
RPD3YNL330C EFG1Q3E705 233 aaKnown RBP8.77□□□□□ -1.01
RPD3YNL330C VPS34P22543 875 aa8.76□□□□□ -1.01
RPD3YNL330C MEF1P25039 761 aa8.76□□□□□ -1.01
RPD3YNL330C GFD2P25370 566 aaKnown RBP8.76□□□□□ -1.01
RPD3YNL330C VAC17P25591 423 aa8.76□□□□□ -1.01
RPD3YNL330C PMI40P29952 429 aaKnown RBP8.76□□□□□ -1.01
RPD3YNL330C TFC1P32367 649 aa8.76□□□□□ -1.01
RPD3YNL330C UTR2P32623 467 aa8.76□□□□□ -1.01
RPD3YNL330C BEM3P32873 1128 aa8.76□□□□□ -1.01
RPD3YNL330C SLA2P33338 968 aa8.76□□□□□ -1.01
RPD3YNL330C SHU2P38957 223 aa8.76□□□□□ -1.01
RPD3YNL330C YAT2P40017 923 aa8.76□□□□□ -1.01
RPD3YNL330C FIR1P40020 876 aa8.76□□□□□ -1.01
RPD3YNL330C SCS2P40075 244 aaKnown RBP8.76□□□□□ -1.01
RPD3YNL330C LAM5P43560 674 aa8.76□□□□□ -1.01
RPD3YNL330C YJL132WP47014 750 aa8.76□□□□□ -1.01
RPD3YNL330C CCT8P47079 568 aaKnown RBP8.76□□□□□ -1.01
RPD3YNL330C TAN1P53072 289 aaPredicted RBP8.76□□□□□ -1.01
RPD3YNL330C DOS2P54858 310 aa8.76□□□□□ -1.01
RPD3YNL330C MSC2Q03455 724 aa8.76□□□□□ -1.01
RPD3YNL330C TIF35Q04067 274 aaKnown RBP8.76□□□□□ -1.01
RPD3YNL330C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.76□□□□□ -1.01not detected
RPD3YNL330C TYW1Q08960 810 aaKnown RBP8.76□□□□□ -1.01
RPD3YNL330C ATG11Q12527 1178 aa8.76□□□□□ -1.01
RPD3YNL330C YEL077CQ3E7X8 1277 aa8.76□□□□□ -1.01
RPD3YNL330C CAR1P00812 333 aaKnown RBP8.75□□□□□ -1.01
RPD3YNL330C HSC82P15108 705 aaKnown RBP8.75□□□□□ -1.01
RPD3YNL330C TYR1P20049 452 aa8.75□□□□□ -1.01
RPD3YNL330C ADE2P21264 571 aaKnown RBP8.75□□□□□ -1.01
RPD3YNL330C GAC1P28006 793 aa8.75□□□□□ -1.01
RPD3YNL330C HEM12P32347 362 aaPredicted RBP8.75□□□□□ -1.01
RPD3YNL330C SMI1P32566 505 aa8.75□□□□□ -1.01
RPD3YNL330C GPT2P36148 743 aa8.75□□□□□ -1.01
RPD3YNL330C GIP1P38229 639 aa8.75□□□□□ -1.01
RPD3YNL330C SHE3P38272 425 aaKnown RBP8.75□□□□□ -1.01
RPD3YNL330C SEC31P38968 1273 aaKnown RBP8.75□□□□□ -1.01
RPD3YNL330C SEC28P40509 296 aaKnown RBP8.75□□□□□ -1.01
RPD3YNL330C IAH1P41734 238 aa8.75□□□□□ -1.01
RPD3YNL330C PRO2P54885 456 aaKnown RBP8.75□□□□□ -1.01
RPD3YNL330C RNY1Q02933 434 aaKnown RBP8.75□□□□□ -1.01
RPD3YNL330C JIP4Q03361 876 aa8.75□□□□□ -1.01
RPD3YNL330C ATG26Q06321 1198 aa8.75□□□□□ -1.01
RPD3YNL330C APC9Q12107 265 aa8.75□□□□□ -1.01
RPD3YNL330C MDM20Q12387 796 aaKnown RBP8.75□□□□□ -1.01
RPD3YNL330C ATP2P00830 511 aaKnown RBP8.74□□□□□ -1.01
RPD3YNL330C ADE4P04046 510 aaKnown RBP8.74□□□□□ -1.01
RPD3YNL330C RHO2P06781 192 aa8.74□□□□□ -1.01
RPD3YNL330C INO1P11986 533 aa8.74□□□□□ -1.01
RPD3YNL330C NDI1P32340 513 aa8.74□□□□□ -1.01
RPD3YNL330C SPT16P32558 1035 aaKnown RBP8.74□□□□□ -1.01
RPD3YNL330C ATG12P38316 186 aa8.74□□□□□ -1.01
RPD3YNL330C YBR259WP38338 688 aa8.74□□□□□ -1.01
RPD3YNL330C PPE1P38796 400 aa8.74□□□□□ -1.01
RPD3YNL330C MXR1P40029 184 aa8.74□□□□□ -1.01
RPD3YNL330C RPS0BP46654 252 aaKnown RBP8.74□□□□□ -1.01
RPD3YNL330C BUD32P53323 261 aa8.74□□□□□ -1.01
RPD3YNL330C CUS2P53830 285 aaPredicted RBP8.74□□□□□ -1.01
RPD3YNL330C SLG1P54867 378 aa8.74□□□□□ -1.01
RPD3YNL330C YET2Q04210 160 aa8.74□□□□□ -1.01
RPD3YNL330C AAD4Q07747 329 aa8.74□□□□□ -1.01
RPD3YNL330C YMR030W-AQ3E760 96 aa8.74□□□□□ -1.01
RPD3YNL330C YPR089WO13585 888 aa8.73□□□□□ -1.01
RPD3YNL330C SAN1P22470 610 aa8.73□□□□□ -1.01
RPD3YNL330C VPS3P23643 1011 aa8.73□□□□□ -1.01
RPD3YNL330C ZIP1P31111 875 aa8.73□□□□□ -1.01
RPD3YNL330C PRM9P39551 298 aa8.73□□□□□ -1.01
RPD3YNL330C INP51P40559 946 aaKnown RBP8.73□□□□□ -1.01
RPD3YNL330C YGL108CP53139 140 aa8.73□□□□□ -1.01
RPD3YNL330C SPC2Q04969 178 aa8.73□□□□□ -1.01
RPD3YNL330C JIP5Q06214 492 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms