RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C STU2P46675 888 aa5.01□□□□□ -1.61
NUP116YMR047C YOR352WQ08816 343 aa5.01□□□□□ -1.61
NUP116YMR047C SGF29P25554 259 aa5.01□□□□□ -1.61
NUP116YMR047C PYC2P32327 1180 aaKnown RBP5.01□□□□□ -1.61
NUP116YMR047C CHS6P40955 746 aa5.01□□□□□ -1.61
NUP116YMR047C CAF120P53836 1060 aa5.01□□□□□ -1.61
NUP116YMR047C RPL34AP87262 121 aaPredicted RBP5.01□□□□□ -1.61
NUP116YMR047C YPL191CQ08930 360 aa5.01□□□□□ -1.61
NUP116YMR047C RKM1Q08961 583 aaPredicted RBP5.01□□□□□ -1.61
NUP116YMR047C HTZ1Q12692 134 aaKnown RBP5.01□□□□□ -1.61
NUP116YMR047C YPR117WQ06116 2489 aa5.01□□□□□ -1.61
NUP116YMR047C BI4P03879 638 aa5□□□□□ -1.61
NUP116YMR047C RRT12P25381 491 aa5□□□□□ -1.61
NUP116YMR047C MRC1P25588 1096 aa5□□□□□ -1.61
NUP116YMR047C ABZ1P37254 787 aaPredicted RBP5□□□□□ -1.61
NUP116YMR047C AGP2P38090 596 aa5□□□□□ -1.61
NUP116YMR047C YHR020WP38708 688 aaKnown RBP5□□□□□ -1.61
NUP116YMR047C OSW5P40219 148 aa5□□□□□ -1.61
NUP116YMR047C YML053CQ04978 212 aa5□□□□□ -1.61
NUP116YMR047C RGA2Q06407 1009 aa5□□□□□ -1.61
NUP116YMR047C RTT10Q08924 1013 aa5□□□□□ -1.61
NUP116YMR047C RPS14AP06367 137 aaKnown RBP5□□□□□ -1.61
NUP116YMR047C PMS1P14242 873 aa5□□□□□ -1.61
NUP116YMR047C MER1P16523 270 aa5□□□□□ -1.61
NUP116YMR047C SGE1P33335 543 aa5□□□□□ -1.61
NUP116YMR047C YKL151CP36059 337 aa5□□□□□ -1.61
NUP116YMR047C RPS14BP39516 138 aaKnown RBP5□□□□□ -1.61
NUP116YMR047C SYG1P40528 902 aa5□□□□□ -1.61
NUP116YMR047C APS3P47064 194 aa5□□□□□ -1.61
NUP116YMR047C CLU1Q03690 1277 aaKnown RBP5□□□□□ -1.61
NUP116YMR047C YML108WQ03759 105 aa5□□□□□ -1.61
NUP116YMR047C YPR078CQ06813 372 aa5□□□□□ -1.61
NUP116YMR047C YBL113CQ7M4S9 792 aa5□□□□□ -1.61
NUP116YMR047C RSR1P13856 272 aa5□□□□□ -1.61
NUP116YMR047C RAM1P22007 431 aa5□□□□□ -1.61
NUP116YMR047C ITR1P30605 584 aa5□□□□□ -1.61
NUP116YMR047C RPN12P32496 274 aa5□□□□□ -1.61
NUP116YMR047C XRS2P33301 854 aa5□□□□□ -1.61
NUP116YMR047C DOM34P33309 386 aa5□□□□□ -1.61
NUP116YMR047C SIF2P38262 535 aa5□□□□□ -1.61
NUP116YMR047C MIP6P38760 659 aaKnown RBP5□□□□□ -1.61
NUP116YMR047C RRF1P38771 230 aa5□□□□□ -1.61
NUP116YMR047C GEM1P39722 662 aa5□□□□□ -1.61
NUP116YMR047C PXA1P41909 870 aa5□□□□□ -1.61
NUP116YMR047C COP1P53622 1201 aaKnown RBP5□□□□□ -1.61
NUP116YMR047C ALF1P53904 254 aa5□□□□□ -1.61
NUP116YMR047C YLR012CQ07927 99 aa5□□□□□ -1.61
NUP116YMR047C FMP25Q08023 583 aa5□□□□□ -1.61
NUP116YMR047C CIT2P08679 460 aa4.99□□□□□ -1.61
NUP116YMR047C PDE1P22434 369 aa4.99□□□□□ -1.61
NUP116YMR047C STO1P34160 861 aaKnown RBP4.99□□□□□ -1.61
NUP116YMR047C SWC5P38326 303 aa4.99□□□□□ -1.61
NUP116YMR047C YHI9P38765 294 aa4.99□□□□□ -1.61
NUP116YMR047C FAA3P39002 694 aa4.99□□□□□ -1.61
NUP116YMR047C RBL2P48606 106 aaKnown RBP4.99□□□□□ -1.61
NUP116YMR047C RSA3Q05942 220 aaKnown RBP4.99□□□□□ -1.61
NUP116YMR047C SOG2Q08817 791 aa4.99□□□□□ -1.61
NUP116YMR047C VPS54Q12071 889 aa4.99□□□□□ -1.61
NUP116YMR047C ACF2Q12168 779 aa4.99□□□□□ -1.61
NUP116YMR047C SVS1Q12254 260 aa4.99□□□□□ -1.61
NUP116YMR047C JIP3O13555 125 aa4.99□□□□□ -1.61
NUP116YMR047C TDA3P38758 523 aa4.99□□□□□ -1.61
NUP116YMR047C LYS9P38999 446 aa4.99□□□□□ -1.61
NUP116YMR047C RPL34BP40525 121 aaKnown RBP4.99□□□□□ -1.61
NUP116YMR047C RRN7P40992 514 aa4.99□□□□□ -1.61
NUP116YMR047C ASI1P54074 624 aa4.99□□□□□ -1.61
NUP116YMR047C PIR3Q03180 325 aa4.99□□□□□ -1.61
NUP116YMR047C RAD33Q04231 177 aa4.99□□□□□ -1.61
NUP116YMR047C RRN11Q04712 507 aa4.99□□□□□ -1.61
NUP116YMR047C TAF9Q05027 157 aa4.99□□□□□ -1.61
NUP116YMR047C HRD3Q05787 833 aa4.99□□□□□ -1.61
NUP116YMR047C YCG1Q06680 1035 aa4.99□□□□□ -1.61
NUP116YMR047C MCD1Q12158 566 aa4.99□□□□□ -1.61
NUP116YMR047C TEF1P02994 458 aaKnown RBP4.98□□□□□ -1.61
NUP116YMR047C PHO13P19881 312 aa4.98□□□□□ -1.61
NUP116YMR047C RPB4P20433 221 aaPredicted RBP4.98□□□□□ -1.61
NUP116YMR047C PDC6P26263 563 aaKnown RBP4.98□□□□□ -1.61
NUP116YMR047C SEG2P34250 1132 aa4.98□□□□□ -1.61
NUP116YMR047C KES1P35844 434 aaKnown RBP4.98□□□□□ -1.61
NUP116YMR047C YBR053CP38235 358 aa4.98□□□□□ -1.61
NUP116YMR047C VAC8P39968 578 aa4.98□□□□□ -1.61
NUP116YMR047C YIR007WP40566 764 aa4.98□□□□□ -1.61
NUP116YMR047C YGR067CP53243 804 aa4.98□□□□□ -1.61
NUP116YMR047C HOL1P53389 586 aa4.98□□□□□ -1.61
NUP116YMR047C IPI3P53877 555 aa4.98□□□□□ -1.61
NUP116YMR047C ECM11Q04110 302 aa4.98□□□□□ -1.61
NUP116YMR047C RCL1Q08096 367 aaPredicted RBP4.98□□□□□ -1.61
NUP116YMR047C BRX1Q08235 291 aaKnown RBP4.98□□□□□ -1.61
NUP116YMR047C PRP6P19735 899 aaPredicted RBP4.98□□□□□ -1.61
NUP116YMR047C SAC6P32599 642 aaKnown RBP4.98□□□□□ -1.61
NUP116YMR047C PEX6P33760 1030 aa4.98□□□□□ -1.61
NUP116YMR047C KAP104P38217 918 aaKnown RBP4.98□□□□□ -1.61
NUP116YMR047C RVS167P39743 482 aaKnown RBP4.98□□□□□ -1.61
NUP116YMR047C AVT2P39981 480 aa4.98□□□□□ -1.61
NUP116YMR047C STB1P42845 420 aa4.98□□□□□ -1.61
NUP116YMR047C STB4P50104 949 aa4.98□□□□□ -1.61
NUP116YMR047C EFM5P53200 248 aaKnown RBP4.98□□□□□ -1.61
NUP116YMR047C SND1Q04007 877 aa4.98□□□□□ -1.61
NUP116YMR047C UFO1Q04511 668 aa4.98□□□□□ -1.61
NUP116YMR047C NOT5Q12514 560 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 87.9 ms