RNA–Protein interactions for RNA: YLR442C

SIR3, Transcript of Silencing protein, yeastyeast

Gene SIR3, Length 2,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR3YLR442C OXR1Q08952 273 aa2.54□□□□□ -2
SIR3YLR442C PAR32Q12515 295 aaKnown RBP2.54□□□□□ -2
SIR3YLR442C MMS1Q06211 1407 aa2.54□□□□□ -2
SIR3YLR442C TRP2P00899 507 aaKnown RBP2.53□□□□□ -2
SIR3YLR442C PTP1P25044 335 aa2.53□□□□□ -2
SIR3YLR442C CWH43P25618 953 aa2.53□□□□□ -2
SIR3YLR442C MGM101P32787 269 aaKnown RBP2.53□□□□□ -2
SIR3YLR442C APE3P37302 537 aaKnown RBP2.53□□□□□ -2
SIR3YLR442C YBR071WP38243 211 aa2.53□□□□□ -2
SIR3YLR442C SAK1P38990 1142 aa2.53□□□□□ -2
SIR3YLR442C JLP2P40206 208 aa2.53□□□□□ -2
SIR3YLR442C YJL068CP40363 299 aa2.53□□□□□ -2
SIR3YLR442C AXL1P40851 1208 aa2.53□□□□□ -2
SIR3YLR442C MDE1P47095 244 aa2.53□□□□□ -2
SIR3YLR442C BNA1P47096 177 aa2.53□□□□□ -2
SIR3YLR442C MCM6P53091 1017 aaKnown RBP2.53□□□□□ -2
SIR3YLR442C YNL146WP53906 100 aa2.53□□□□□ -2
SIR3YLR442C NHX1Q04121 633 aa2.53□□□□□ -2
SIR3YLR442C NUT2Q06213 157 aa2.53□□□□□ -2
SIR3YLR442C ATG13Q06628 738 aa2.53□□□□□ -2
SIR3YLR442C RBD2Q12270 262 aa2.53□□□□□ -2
SIR3YLR442C SIR3P06701 978 aa2.53□□□□□ -2
SIR3YLR442C MATALPHA2P0CY08 210 aa2.53□□□□□ -2
SIR3YLR442C HMLALPHA2P0CY09 210 aa2.53□□□□□ -2
SIR3YLR442C WHI2P12611 486 aa2.53□□□□□ -2
SIR3YLR442C NMT1P14743 455 aa2.53□□□□□ -2
SIR3YLR442C PRP4P20053 465 aaKnown RBP2.53□□□□□ -2
SIR3YLR442C SEC62P21825 274 aa2.53□□□□□ -2
SIR3YLR442C OCA4P25366 362 aa2.53□□□□□ -2
SIR3YLR442C SPS22P25380 463 aa2.53□□□□□ -2
SIR3YLR442C RPT1P33299 467 aaKnown RBP2.53□□□□□ -2
SIR3YLR442C MRPL37P36532 105 aa2.53□□□□□ -2
SIR3YLR442C UGA2P38067 497 aa2.53□□□□□ -2
SIR3YLR442C SMF2P38778 549 aa2.53□□□□□ -2
SIR3YLR442C SIT1P39980 628 aa2.53□□□□□ -2
SIR3YLR442C SOK1P40317 901 aa2.53□□□□□ -2
SIR3YLR442C STU2P46675 888 aa2.53□□□□□ -2
SIR3YLR442C ORM1P53224 222 aa2.53□□□□□ -2
SIR3YLR442C ART5P53244 586 aaKnown RBP2.53□□□□□ -2
SIR3YLR442C PBP1P53297 722 aaKnown RBP2.53□□□□□ -2
SIR3YLR442C SSU72P53538 206 aaPredicted RBP2.53□□□□□ -2
SIR3YLR442C YNL181WP53878 407 aa2.53□□□□□ -2
SIR3YLR442C ATC1Q04005 294 aa2.53□□□□□ -2
SIR3YLR442C TAF11Q04226 346 aa2.53□□□□□ -2
SIR3YLR442C GYL1Q04322 720 aa2.53□□□□□ -2
SIR3YLR442C BCH1Q05029 724 aa2.53□□□□□ -2
SIR3YLR442C MRL1Q06815 381 aa2.53□□□□□ -2
SIR3YLR442C VAM6Q07468 1049 aa2.53□□□□□ -2
SIR3YLR442C YDL114WQ07530 308 aa2.53□□□□□ -2
SIR3YLR442C DDC1Q08949 612 aa2.53□□□□□ -2
SIR3YLR442C FLC1Q08967 793 aa2.53□□□□□ -2
SIR3YLR442C CHS5Q12114 671 aaKnown RBP2.53□□□□□ -2
SIR3YLR442C LAG2Q92325 660 aa2.53□□□□□ -2
SIR3YLR442C YML002WP0CF17 737 aa2.52□□□□□ -2.01
SIR3YLR442C MRPS28P21771 286 aa2.52□□□□□ -2.01
SIR3YLR442C CLB1P24868 471 aa2.52□□□□□ -2.01
SIR3YLR442C ROX1P25042 368 aa2.52□□□□□ -2.01
SIR3YLR442C YCR016WP25617 290 aaKnown RBP2.52□□□□□ -2.01
SIR3YLR442C SEC21P32074 935 aaKnown RBP2.52□□□□□ -2.01
SIR3YLR442C CSE1P33307 960 aa2.52□□□□□ -2.01
SIR3YLR442C DBP7P36120 742 aaKnown RBP2.52□□□□□ -2.01
SIR3YLR442C YHL017WP38745 532 aa2.52□□□□□ -2.01
SIR3YLR442C YIL092WP40497 633 aa2.52□□□□□ -2.01
SIR3YLR442C HIS6P40545 261 aa2.52□□□□□ -2.01
SIR3YLR442C ALB1P47019 175 aaPredicted RBP2.52□□□□□ -2.01
SIR3YLR442C MAD3P47074 515 aa2.52□□□□□ -2.01
SIR3YLR442C TYW3P53177 273 aa2.52□□□□□ -2.01
SIR3YLR442C MRPL50P53724 139 aa2.52□□□□□ -2.01
SIR3YLR442C ESBP6P53918 673 aa2.52□□□□□ -2.01
SIR3YLR442C YNL034WP53963 612 aa2.52□□□□□ -2.01
SIR3YLR442C YNL018CP53976 612 aa2.52□□□□□ -2.01
SIR3YLR442C ARP4P80428 489 aa2.52□□□□□ -2.01
SIR3YLR442C SSL2Q00578 843 aa2.52□□□□□ -2.01
SIR3YLR442C RPT6Q01939 405 aaKnown RBP2.52□□□□□ -2.01
SIR3YLR442C DML1Q03652 475 aa2.52□□□□□ -2.01
SIR3YLR442C UBX2Q04228 584 aa2.52□□□□□ -2.01
SIR3YLR442C MGR3Q04472 501 aa2.52□□□□□ -2.01
SIR3YLR442C GTO3Q04806 366 aa2.52□□□□□ -2.01
SIR3YLR442C IVY1Q04934 453 aa2.52□□□□□ -2.01
SIR3YLR442C BLS1Q06071 122 aa2.52□□□□□ -2.01
SIR3YLR442C NBA1Q08229 501 aaKnown RBP2.52□□□□□ -2.01
SIR3YLR442C SDH5Q08230 162 aa2.52□□□□□ -2.01
SIR3YLR442C ATP16Q12165 160 aa2.52□□□□□ -2.01
SIR3YLR442C FRE6Q12473 712 aa2.52□□□□□ -2.01
SIR3YLR442C AVL9Q12500 764 aa2.52□□□□□ -2.01
SIR3YLR442C PCD1Q12524 340 aa2.52□□□□□ -2.01
SIR3YLR442C SET6Q12529 373 aa2.52□□□□□ -2.01
SIR3YLR442C APM4Q99186 491 aa2.52□□□□□ -2.01
SIR3YLR442C TDH1P00360 332 aaKnown RBP2.52□□□□□ -2.01
SIR3YLR442C SNF1P06782 633 aaKnown RBP2.52□□□□□ -2.01
SIR3YLR442C FUM1P08417 488 aaKnown RBP2.52□□□□□ -2.01
SIR3YLR442C PFK1P16861 987 aaKnown RBP2.52□□□□□ -2.01
SIR3YLR442C PRI2P20457 528 aa2.52□□□□□ -2.01
SIR3YLR442C ISY1P21374 235 aaPredicted RBP2.52□□□□□ -2.01
SIR3YLR442C SEC14P24280 304 aaKnown RBP2.52□□□□□ -2.01
SIR3YLR442C VMA6P32366 345 aaKnown RBP2.52□□□□□ -2.01
SIR3YLR442C YSC84P32793 468 aa2.52□□□□□ -2.01
SIR3YLR442C SDS22P36047 338 aa2.52□□□□□ -2.01
SIR3YLR442C LAS1P36146 502 aaPredicted RBP2.52□□□□□ -2.01
SIR3YLR442C SRL3P36167 246 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms