RNA–Protein interactions for RNA: YDR001C

NTH1, Transcript of Neutral trehalase, degrades trehalose, yeast

Gene NTH1, Length 2,256 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NTH1	YDR001C	ENB1	Q08299	606 aa		4.28	□□□□□ -1.72
NTH1	YDR001C	PSF3	Q12146	194 aa		4.28	□□□□□ -1.72
NTH1	YDR001C	TY1B-BR	Q12193	1756 aa		4.27	□□□□□ -1.73
NTH1	YDR001C	TY1B-GR3	Q12316	1755 aa		4.27	□□□□□ -1.73
NTH1	YDR001C	TY1B-OR	Q92393	1755 aa		4.27	□□□□□ -1.73
NTH1	YDR001C	TRP4	P07285	380 aa	Predicted RBP	4.27	□□□□□ -1.73
NTH1	YDR001C	PRP16	P15938	1071 aa	Predicted RBP	4.27	□□□□□ -1.73
NTH1	YDR001C	CDC60	P26637	1090 aa	Known RBP	4.27	□□□□□ -1.73
NTH1	YDR001C	TOD6	P34219	525 aa		4.27	□□□□□ -1.73
NTH1	YDR001C	THI80	P35202	319 aa		4.27	□□□□□ -1.73
NTH1	YDR001C	RPC37	P36121	282 aa		4.27	□□□□□ -1.73
NTH1	YDR001C	PIM1	P36775	1133 aa		4.27	□□□□□ -1.73
NTH1	YDR001C	SHM2	P37291	469 aa	Known RBP	4.27	□□□□□ -1.73
NTH1	YDR001C	VPS8	P39702	1274 aa		4.27	□□□□□ -1.73
NTH1	YDR001C	IMA5	P40884	581 aa		4.27	□□□□□ -1.73
NTH1	YDR001C	PEF1	P53238	335 aa		4.27	□□□□□ -1.73
NTH1	YDR001C	RRP46	P53256	223 aa	Predicted RBP	4.27	□□□□□ -1.73
NTH1	YDR001C	ASI1	P54074	624 aa		4.27	□□□□□ -1.73
NTH1	YDR001C	THI22	Q06490	572 aa		4.27	□□□□□ -1.73
NTH1	YDR001C	CIR2	Q08822	631 aa		4.27	□□□□□ -1.73
NTH1	YDR001C	POM34	Q12445	299 aa		4.27	□□□□□ -1.73
NTH1	YDR001C	VPS5	Q92331	675 aa		4.27	□□□□□ -1.73
NTH1	YDR001C	VAS1	P07806	1104 aa	Known RBP	4.26	□□□□□ -1.73
NTH1	YDR001C	ERG20	P08524	352 aa	Known RBP	4.26	□□□□□ -1.73
NTH1	YDR001C	PMR1	P13586	950 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	CLB4	P24871	460 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	RPL5	P26321	297 aa	Known RBP	4.26	□□□□□ -1.73
NTH1	YDR001C	YSW1	P38280	609 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	SAP185	P40856	1058 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	YDL183C	P48569	320 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	MAL13	P53338	473 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	CTK1	Q03957	528 aa	Known RBP	4.26	□□□□□ -1.73
NTH1	YDR001C	KRE28	Q04431	385 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	TMA10	Q06177	86 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	DBP10	Q12389	995 aa	Known RBP	4.26	□□□□□ -1.73
NTH1	YDR001C	PDR18	P53756	1333 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	RPO26	P20435	155 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	CBP3	P21560	335 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	MSM1	P22438	575 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	PEX1	P24004	1043 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	MAC1	P35192	417 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	LHS1	P36016	881 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	YBR053C	P38235	358 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	CRG1	P38892	291 aa	RIP-Chip data	4.26	□□□□□ -1.73	not detected
NTH1	YDR001C	CCT4	P39078	528 aa	Known RBP	4.26	□□□□□ -1.73
NTH1	YDR001C	VID27	P40157	782 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	PRM2	P40534	656 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	RIM8	P53179	542 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	RIA1	P53893	1110 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	RCF1	Q03713	159 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	RBA50	Q04418	439 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	PSR2	Q07949	397 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	RUD3	Q12234	484 aa	Known RBP	4.26	□□□□□ -1.73
NTH1	YDR001C	NUP192	P47054	1683 aa		4.26	□□□□□ -1.73
NTH1	YDR001C	LAT1	P12695	482 aa	Known RBP	4.25	□□□□□ -1.73
NTH1	YDR001C	SWC3	P31376	625 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	TFC3	P34111	1160 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	ERC1	P38767	581 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	LIN1	P38852	340 aa	Predicted RBP	4.25	□□□□□ -1.73
NTH1	YDR001C	FMO1	P38866	432 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	SPC72	P39723	622 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	NCS2	P53923	493 aa	Predicted RBP	4.25	□□□□□ -1.73
NTH1	YDR001C	MCH5	Q08777	521 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	CHS5	Q12114	671 aa	Known RBP	4.25	□□□□□ -1.73
NTH1	YDR001C	TRM13	Q12383	476 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	NTE1	Q04958	1679 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	PHO81	P17442	1178 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	PRD1	P25375	712 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	DCG1	P32460	244 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	RAD5	P32849	1169 aa	Predicted RBP	4.25	□□□□□ -1.73
NTH1	YDR001C	SEC66	P33754	206 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	SDS22	P36047	338 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	NUP60	P39705	539 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	FTR1	P40088	404 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	TAF1	P46677	1066 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	AMA1	P50082	593 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	ORM1	P53224	222 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	YML131W	Q03102	365 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	FAR8	Q05040	523 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	RGA2	Q06407	1009 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	PSR1	Q07800	427 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	ATG11	Q12527	1178 aa		4.25	□□□□□ -1.73
NTH1	YDR001C	NAT1	P12945	854 aa	Known RBP	4.24	□□□□□ -1.73
NTH1	YDR001C	TAL1	P15019	335 aa	Known RBP	4.24	□□□□□ -1.73
NTH1	YDR001C	FRS2	P15625	503 aa	Known RBP	4.24	□□□□□ -1.73
NTH1	YDR001C	SPE2	P21182	396 aa		4.24	□□□□□ -1.73
NTH1	YDR001C	UBC1	P21734	215 aa	Known RBP	4.24	□□□□□ -1.73
NTH1	YDR001C	ARG1	P22768	420 aa		4.24	□□□□□ -1.73
NTH1	YDR001C	PRP22	P24384	1145 aa	Known RBP	4.24	□□□□□ -1.73
NTH1	YDR001C	KIN82	P25341	720 aa		4.24	□□□□□ -1.73
NTH1	YDR001C	CWH43	P25618	953 aa		4.24	□□□□□ -1.73
NTH1	YDR001C	BUD14	P27637	709 aa		4.24	□□□□□ -1.73
NTH1	YDR001C	YEL043W	P32618	956 aa		4.24	□□□□□ -1.73
NTH1	YDR001C	SRL3	P36167	246 aa		4.24	□□□□□ -1.73
NTH1	YDR001C	APM3	P38153	483 aa		4.24	□□□□□ -1.73
NTH1	YDR001C	SHC1	P39000	512 aa		4.24	□□□□□ -1.73
NTH1	YDR001C	SSP120	P39931	234 aa	Known RBP	4.24	□□□□□ -1.73
NTH1	YDR001C	TIM11	P81449	96 aa	Predicted RBP	4.24	□□□□□ -1.73
NTH1	YDR001C	SEC5	P89102	971 aa		4.24	□□□□□ -1.73
NTH1	YDR001C	MFM1	Q02783	413 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms