RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C RNR3P21672 869 aaKnown RBP4.45□□□□□ -1.7
RPN4YDL020C SWC3P31376 625 aa4.45□□□□□ -1.7
RPN4YDL020C TDP1P38319 544 aa4.45□□□□□ -1.7
RPN4YDL020C VID27P40157 782 aa4.45□□□□□ -1.7
RPN4YDL020C RAD26P40352 1085 aa4.45□□□□□ -1.7
RPN4YDL020C BNA1P47096 177 aa4.45□□□□□ -1.7
RPN4YDL020C YGL117WP53133 265 aa4.45□□□□□ -1.7
RPN4YDL020C CPR8P53728 308 aa4.45□□□□□ -1.7
RPN4YDL020C TFC6Q06339 672 aa4.45□□□□□ -1.7
RPN4YDL020C CSR1Q06705 408 aaKnown RBP4.45□□□□□ -1.7
RPN4YDL020C NKP1Q12493 238 aa4.45□□□□□ -1.7
RPN4YDL020C YER175W-AQ8TGU4 54 aa4.45□□□□□ -1.7
RPN4YDL020C STU2P46675 888 aa4.44□□□□□ -1.7
RPN4YDL020C ZAP1P47043 880 aa4.44□□□□□ -1.7
RPN4YDL020C CTF18P49956 741 aa4.44□□□□□ -1.7
RPN4YDL020C TAM41P53230 385 aa4.44□□□□□ -1.7
RPN4YDL020C YNL092WP53934 400 aa4.44□□□□□ -1.7
RPN4YDL020C GFD1Q04839 188 aaKnown RBP4.44□□□□□ -1.7
RPN4YDL020C CRT10Q08226 957 aa4.44□□□□□ -1.7
RPN4YDL020C SNF1P06782 633 aaKnown RBP4.44□□□□□ -1.7
RPN4YDL020C RAD16P31244 790 aa4.44□□□□□ -1.7
RPN4YDL020C GCD7P32502 381 aaPredicted RBP4.44□□□□□ -1.7
RPN4YDL020C SLC1P33333 303 aa4.44□□□□□ -1.7
RPN4YDL020C RRT6P53117 311 aaPredicted RBP4.44□□□□□ -1.7
RPN4YDL020C VID22Q05934 901 aa4.44□□□□□ -1.7
RPN4YDL020C COX17Q12287 69 aa4.44□□□□□ -1.7
RPN4YDL020C PFK2P16862 959 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
RPN4YDL020C AMD2P22580 549 aa4.43□□□□□ -1.7
RPN4YDL020C MRPL9P31334 269 aa4.43□□□□□ -1.7
RPN4YDL020C RRN3P36070 627 aa4.43□□□□□ -1.7
RPN4YDL020C UME6P39001 836 aa4.43□□□□□ -1.7
RPN4YDL020C YEL020CP39994 560 aa4.43□□□□□ -1.7
RPN4YDL020C MAM1P40065 302 aa4.43□□□□□ -1.7
RPN4YDL020C KAP123P40069 1113 aaKnown RBP4.43□□□□□ -1.7
RPN4YDL020C SKP2P42843 763 aa4.43□□□□□ -1.7
RPN4YDL020C YML119WQ03208 357 aa4.43□□□□□ -1.7
RPN4YDL020C TRM8Q12009 286 aa4.43□□□□□ -1.7
RPN4YDL020C SUT2Q12286 268 aa4.43□□□□□ -1.7
RPN4YDL020C PNO1Q99216 274 aaKnown RBP4.43□□□□□ -1.7
RPN4YDL020C RPN13O13563 156 aa4.42□□□□□ -1.7
RPN4YDL020C TPK1P06244 397 aa4.42□□□□□ -1.7
RPN4YDL020C PDE1P22434 369 aa4.42□□□□□ -1.7
RPN4YDL020C SAT4P25333 603 aaKnown RBP4.42□□□□□ -1.7
RPN4YDL020C RER1P25560 188 aa4.42□□□□□ -1.7
RPN4YDL020C URK1P27515 501 aa4.42□□□□□ -1.7
RPN4YDL020C RPT3P33298 428 aaKnown RBP4.42□□□□□ -1.7
RPN4YDL020C MTG2P38860 518 aa4.42□□□□□ -1.7
RPN4YDL020C YIL166CP40445 542 aa4.42□□□□□ -1.7
RPN4YDL020C QRI1P43123 477 aaKnown RBP4.42□□□□□ -1.7
RPN4YDL020C UBP16Q02863 499 aa4.42□□□□□ -1.7
RPN4YDL020C WAR1Q03631 944 aa4.42□□□□□ -1.7
RPN4YDL020C GIS1Q03833 894 aa4.42□□□□□ -1.7
RPN4YDL020C VAM6Q07468 1049 aa4.42□□□□□ -1.7
RPN4YDL020C YDL242WQ07746 117 aa4.42□□□□□ -1.7
RPN4YDL020C NEW1Q08972 1196 aaKnown RBP4.42□□□□□ -1.7
RPN4YDL020C PCD1Q12524 340 aa4.42□□□□□ -1.7
RPN4YDL020C YBR255C-AQ3E776 120 aa4.42□□□□□ -1.7
RPN4YDL020C LEU2P04173 364 aaPredicted RBP4.41□□□□□ -1.7
RPN4YDL020C CHO2P05374 869 aaKnown RBP4.41□□□□□ -1.7
RPN4YDL020C GUK1P15454 187 aaKnown RBP4.41□□□□□ -1.7
RPN4YDL020C KGD2P19262 463 aaPredicted RBP4.41□□□□□ -1.7
RPN4YDL020C RPA135P22138 1203 aaKnown RBP4.41□□□□□ -1.7
RPN4YDL020C GDA1P32621 518 aa4.41□□□□□ -1.7
RPN4YDL020C UGP1P32861 499 aaKnown RBP4.41□□□□□ -1.7
RPN4YDL020C TEF4P36008 412 aaKnown RBP4.41□□□□□ -1.7
RPN4YDL020C VPS8P39702 1274 aa4.41□□□□□ -1.7
RPN4YDL020C LAS21P40367 830 aa4.41□□□□□ -1.7
RPN4YDL020C MTG1Q03151 367 aaPredicted RBP4.41□□□□□ -1.7
RPN4YDL020C YMR018WQ04364 514 aa4.41□□□□□ -1.7
RPN4YDL020C ARG7Q04728 441 aa4.41□□□□□ -1.7
RPN4YDL020C OPY2Q06810 360 aa4.41□□□□□ -1.7
RPN4YDL020C PCL8Q08966 492 aa4.41□□□□□ -1.7
RPN4YDL020C RPL7AP05737 244 aaKnown RBP4.4□□□□□ -1.7
RPN4YDL020C PMA2P19657 947 aa4.4□□□□□ -1.7
RPN4YDL020C MCM10P32354 571 aa4.4□□□□□ -1.7
RPN4YDL020C NUP120P35729 1037 aa4.4□□□□□ -1.7
RPN4YDL020C AXL2P38928 823 aa4.4□□□□□ -1.7
RPN4YDL020C YFL015CP43578 164 aa4.4□□□□□ -1.7
RPN4YDL020C PSP1P50896 841 aaKnown RBP4.4□□□□□ -1.7
RPN4YDL020C COG1P53079 417 aa4.4□□□□□ -1.7
RPN4YDL020C APM1Q00776 475 aaPredicted RBP4.4□□□□□ -1.7
RPN4YDL020C VPS72Q03388 795 aa4.4□□□□□ -1.7
RPN4YDL020C STP3Q05937 343 aa4.4□□□□□ -1.7
RPN4YDL020C RPL7BQ12213 244 aaKnown RBP4.4□□□□□ -1.7
RPN4YDL020C RVB2Q12464 471 aaKnown RBP4.4□□□□□ -1.7
RPN4YDL020C ATP2P00830 511 aaKnown RBP4.4□□□□□ -1.71
RPN4YDL020C SPO11P23179 398 aa4.4□□□□□ -1.71
RPN4YDL020C AAD3P25612 363 aa4.4□□□□□ -1.71
RPN4YDL020C YMC1P32331 307 aa4.4□□□□□ -1.71
RPN4YDL020C SIP1P32578 815 aa4.4□□□□□ -1.71
RPN4YDL020C NAB3P38996 802 aaKnown RBP RIP-Chip data4.4□□□□□ -1.71not detected
RPN4YDL020C BUD16P39988 312 aa4.4□□□□□ -1.71
RPN4YDL020C MRK1P50873 501 aa4.4□□□□□ -1.71
RPN4YDL020C IMO32P53219 342 aa4.4□□□□□ -1.71
RPN4YDL020C COG2P53271 262 aa4.4□□□□□ -1.71
RPN4YDL020C MEP3P53390 489 aa4.4□□□□□ -1.71
RPN4YDL020C CSL4P53859 292 aaPredicted RBP4.4□□□□□ -1.71
RPN4YDL020C YML053CQ04978 212 aa4.4□□□□□ -1.71
RPN4YDL020C ULA1Q12059 462 aa4.4□□□□□ -1.71
RPN4YDL020C LCB4Q12246 624 aa4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 116.6 ms