RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 AsipQ03288 131 aa14.31□□□□□ -0.12
Lig3-209ENSMUST00000173009 Rhox4eQ504P9 205 aa14.31□□□□□ -0.12
Lig3-209ENSMUST00000173009 BC048562Q80ZQ7 204 aa14.31□□□□□ -0.12
Lig3-209ENSMUST00000173009 Cotl1Q9CQI6 142 aa14.31□□□□□ -0.12
Lig3-209ENSMUST00000173009 Zmat5Q9CQR5 170 aa14.31□□□□□ -0.12
Lig3-209ENSMUST00000173009 ChtopQ9CY57 249 aaKnown RBP14.31□□□□□ -0.12
Lig3-209ENSMUST00000173009 Ube2l6Q9QZU9 153 aa14.31□□□□□ -0.12
Lig3-209ENSMUST00000173009 SnapinQ9Z266 136 aa14.31□□□□□ -0.12
Lig3-209ENSMUST00000173009 Rps20P60867 119 aaKnown RBP14.3□□□□□ -0.12
Lig3-209ENSMUST00000173009 NpbQ8K4P1 119 aa14.3□□□□□ -0.12
Lig3-209ENSMUST00000173009 Anapc16Q9CPV2 110 aa14.3□□□□□ -0.12
Lig3-209ENSMUST00000173009 Q9CRC3 126 aa14.3□□□□□ -0.12
Lig3-209ENSMUST00000173009 Ighv1-23A0A0A6YVW3 117 aa14.29□□□□□ -0.12
Lig3-209ENSMUST00000173009 Ighv1-5A0A0A6YWG2 117 aa14.29□□□□□ -0.12
Lig3-209ENSMUST00000173009 MdfiP70331 251 aa14.29□□□□□ -0.12
Lig3-209ENSMUST00000173009 4930474N05RikQ8BVR5 218 aa14.29□□□□□ -0.12
Lig3-209ENSMUST00000173009 Morn3Q8C5T4 241 aa14.29□□□□□ -0.12
Lig3-209ENSMUST00000173009 Trav7-4A0A075B6C1 113 aa14.29□□□□□ -0.12
Lig3-209ENSMUST00000173009 Trav9n-2A0A0G2JDP3 113 aa14.29□□□□□ -0.12
Lig3-209ENSMUST00000173009 Ndufa4l2Q4FZG9 87 aa14.29□□□□□ -0.12
Lig3-209ENSMUST00000173009 Trav7d-4Q5R1H9 113 aa14.29□□□□□ -0.12
Lig3-209ENSMUST00000173009 Leap2Q91V13 76 aa14.29□□□□□ -0.12
Lig3-209ENSMUST00000173009 HampQ9EQ21 83 aa14.29□□□□□ -0.12
Lig3-209ENSMUST00000173009 PigyP0C1P0 71 aa14.28□□□□□ -0.12
Lig3-209ENSMUST00000173009 RhebQ921J2 184 aa14.28□□□□□ -0.12
Lig3-209ENSMUST00000173009 Q99M08 65 aa14.28□□□□□ -0.12
Lig3-209ENSMUST00000173009 Nop10Q9CQS2 64 aa14.28□□□□□ -0.12
Lig3-209ENSMUST00000173009 Trav14n-3A0A075B645 120 aa14.27□□□□□ -0.12
Lig3-209ENSMUST00000173009 Ms4a12A0A087WSB9 263 aa14.27□□□□□ -0.12
Lig3-209ENSMUST00000173009 CtsgP28293 261 aa14.27□□□□□ -0.12
Lig3-209ENSMUST00000173009 Olfr1537P34983 314 aa14.27□□□□□ -0.12
Lig3-209ENSMUST00000173009 Gm14137Q8CE97 175 aa14.27□□□□□ -0.12
Lig3-209ENSMUST00000173009 Trav13d-1A0A075B606 110 aa14.27□□□□□ -0.13
Lig3-209ENSMUST00000173009 Gm10490F6VBM2 120 aa14.27□□□□□ -0.13
Lig3-209ENSMUST00000173009 Sub1P11031 127 aaKnown RBP14.27□□□□□ -0.13
Lig3-209ENSMUST00000173009 Fam210aQ8BGY7 273 aa14.27□□□□□ -0.13
Lig3-209ENSMUST00000173009 Muc6Q80T03 2850 aa14.26□□□□□ -0.13
Lig3-209ENSMUST00000173009 Trbv13-1A0A0B4J1P8 112 aa14.26□□□□□ -0.13
Lig3-209ENSMUST00000173009 Foxh1O88621 401 aa14.26□□□□□ -0.13
Lig3-209ENSMUST00000173009 Ctdsp1P58466 261 aa14.26□□□□□ -0.13
Lig3-209ENSMUST00000173009 Sslp1Q3UN54 99 aa14.26□□□□□ -0.13
Lig3-209ENSMUST00000173009 Tmed6Q9CQG0 239 aa14.26□□□□□ -0.13
Lig3-209ENSMUST00000173009 Fxyd5P97808 178 aa14.25□□□□□ -0.13
Lig3-209ENSMUST00000173009 C1qcQ02105 246 aa14.25□□□□□ -0.13
Lig3-209ENSMUST00000173009 Gm10334Q792Y8 246 aa14.25□□□□□ -0.13
Lig3-209ENSMUST00000173009 Olfr1431Q8VF59 312 aa14.25□□□□□ -0.13
Lig3-209ENSMUST00000173009 Gtsf1lQ9CWD0 151 aa14.25□□□□□ -0.13
Lig3-209ENSMUST00000173009 Tmem263Q9DAM7 115 aa14.25□□□□□ -0.13
Lig3-209ENSMUST00000173009 Pkd1l1Q8R526 2615 aa14.25□□□□□ -0.13
Lig3-209ENSMUST00000173009 Olfr1419Q7TQS2 343 aa14.24□□□□□ -0.13
Lig3-209ENSMUST00000173009 Mrpl36Q99N90 102 aa14.24□□□□□ -0.13
Lig3-209ENSMUST00000173009 MrapQ9D159 127 aa14.24□□□□□ -0.13
Lig3-209ENSMUST00000173009 Trav7n-4A0A075B620 113 aa14.24□□□□□ -0.13
Lig3-209ENSMUST00000173009 Olfr1118A0A0J9YUE7 307 aa14.24□□□□□ -0.13
Lig3-209ENSMUST00000173009 Ins1P01325 108 aa14.24□□□□□ -0.13
Lig3-209ENSMUST00000173009 P01745 121 aa14.24□□□□□ -0.13
Lig3-209ENSMUST00000173009 Rnf185Q91YT2 192 aa14.24□□□□□ -0.13
Lig3-209ENSMUST00000173009 Foxi1Q922I5 372 aa14.24□□□□□ -0.13
Lig3-209ENSMUST00000173009 Gm21874J3QNZ6 232 aa14.23□□□□□ -0.13
Lig3-209ENSMUST00000173009 S100a4P07091 101 aa14.23□□□□□ -0.13
Lig3-209ENSMUST00000173009 Igkv4-74A0A0B4J1I3 119 aa14.22□□□□□ -0.13
Lig3-209ENSMUST00000173009 Bloc1s1O55102 125 aa14.22□□□□□ -0.13
Lig3-209ENSMUST00000173009 Trav7-2Q5R1I3 112 aa14.22□□□□□ -0.13
Lig3-209ENSMUST00000173009 NdnP25233 325 aa14.22□□□□□ -0.13
Lig3-209ENSMUST00000173009 Olfr322Q5NCC8 327 aa14.22□□□□□ -0.13
Lig3-209ENSMUST00000173009 Rhox4gQ2MDF7 205 aa14.21□□□□□ -0.13
Lig3-209ENSMUST00000173009 Khdc1aQ3UWR2 166 aa14.21□□□□□ -0.13
Lig3-209ENSMUST00000173009 Gkn1Q9CR36 201 aa14.21□□□□□ -0.13
Lig3-209ENSMUST00000173009 Tenm2Q9WTS5 2764 aa14.21□□□□□ -0.13
Lig3-209ENSMUST00000173009 B230217C12RikE9Q3Z1 139 aa14.2□□□□□ -0.14
Lig3-209ENSMUST00000173009 TshbP12656 138 aa14.2□□□□□ -0.14
Lig3-209ENSMUST00000173009 Immp2lQ8BPT6 175 aa14.2□□□□□ -0.14
Lig3-209ENSMUST00000173009 H2al2bA9Z055 111 aa14.19□□□□□ -0.14
Lig3-209ENSMUST00000173009 Atp5iQ06185 71 aaKnown RBP14.19□□□□□ -0.14
Lig3-209ENSMUST00000173009 Tppp2Q0P5Y3 170 aa14.19□□□□□ -0.14
Lig3-209ENSMUST00000173009 Olfr1191-ps1A0A1L1STD5 311 aa14.19□□□□□ -0.14
Lig3-209ENSMUST00000173009 Gm10203F6QJ09 66 aa14.19□□□□□ -0.14
Lig3-209ENSMUST00000173009 Trav7d-3Q5R1I1 112 aa14.19□□□□□ -0.14
Lig3-209ENSMUST00000173009 7420426K07RikQ3UX66 186 aa14.18□□□□□ -0.14
Lig3-209ENSMUST00000173009 Prss3Q792Z0 246 aaKnown RBP14.18□□□□□ -0.14
Lig3-209ENSMUST00000173009 Cbln2Q8BGU2 224 aa14.18□□□□□ -0.14
Lig3-209ENSMUST00000173009 Nkx6-2D3Z4R4 277 aa14.17□□□□□ -0.14
Lig3-209ENSMUST00000173009 Csn3P06796 181 aa14.17□□□□□ -0.14
Lig3-209ENSMUST00000173009 Pex7P97865 318 aa14.17□□□□□ -0.14
Lig3-209ENSMUST00000173009 Olfr313Q5NC55 308 aa14.17□□□□□ -0.14
Lig3-209ENSMUST00000173009 Higd2aQ9CQJ1 106 aa14.17□□□□□ -0.14
Lig3-209ENSMUST00000173009 Tmem241Q3UME2 297 aa14.17□□□□□ -0.14
Lig3-209ENSMUST00000173009 Foxc1Q61572 553 aa14.17□□□□□ -0.14
Lig3-209ENSMUST00000173009 Trav14d-1A0A075B6B1 121 aa14.16□□□□□ -0.14
Lig3-209ENSMUST00000173009 Scgb1b29D2XZ31 93 aa14.16□□□□□ -0.14
Lig3-209ENSMUST00000173009 Gm20499D3Z4G5 72 aa14.16□□□□□ -0.14
Lig3-209ENSMUST00000173009 Scgb1b20E9PWZ2 93 aa14.16□□□□□ -0.14
Lig3-209ENSMUST00000173009 Smim15Q3UTD9 74 aa14.16□□□□□ -0.14
Lig3-209ENSMUST00000173009 Kcnip4Q6PHZ8 250 aa14.16□□□□□ -0.14
Lig3-209ENSMUST00000173009 Chchd7Q8K2Q5 85 aa14.16□□□□□ -0.14
Lig3-209ENSMUST00000173009 Pttg1Q9CQJ7 199 aa14.16□□□□□ -0.14
Lig3-209ENSMUST00000173009 Q9CR34 168 aa14.16□□□□□ -0.14
Lig3-209ENSMUST00000173009 Tppp3Q9CRB6 176 aaKnown RBP14.16□□□□□ -0.14
Lig3-209ENSMUST00000173009 Cacng7P62956 275 aa14.15□□□□□ -0.14
Lig3-209ENSMUST00000173009 Cphx2Q8BX39 182 aa14.15□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 147.6 ms