Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Gm25239-201ENSMUST00000174915 86 ntBASIC25.93■■□□□ 1.74
Cotl1Q9CQI6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Cotl1Q9CQI6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Cotl1Q9CQI6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cotl1Q9CQI6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Cotl1Q9CQI6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Cotl1Q9CQI6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.04■■□□□ 1.44
Cotl1Q9CQI6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Cotl1Q9CQI6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cotl1Q9CQI6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Cotl1Q9CQI6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cotl1Q9CQI6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Cotl1Q9CQI6 Psd-208ENSMUST00000224556 2034 ntBASIC23.33■■□□□ 1.32
Cotl1Q9CQI6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cotl1Q9CQI6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Cotl1Q9CQI6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cotl1Q9CQI6 Gm15042-201ENSMUST00000120212 883 ntBASIC23.21■■□□□ 1.31
Cotl1Q9CQI6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cotl1Q9CQI6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cotl1Q9CQI6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cotl1Q9CQI6 Gm15045-201ENSMUST00000117359 883 ntBASIC22.73■■□□□ 1.23
Cotl1Q9CQI6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cotl1Q9CQI6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.62■■□□□ 1.21
Cotl1Q9CQI6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cotl1Q9CQI6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cotl1Q9CQI6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cotl1Q9CQI6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cotl1Q9CQI6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cotl1Q9CQI6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cotl1Q9CQI6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cotl1Q9CQI6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cotl1Q9CQI6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Cotl1Q9CQI6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cotl1Q9CQI6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.29■■□□□ 1.16
Cotl1Q9CQI6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Cotl1Q9CQI6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cotl1Q9CQI6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Cotl1Q9CQI6 Gm24109-201ENSMUST00000175489 103 ntBASIC22.18■■□□□ 1.14
Cotl1Q9CQI6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cotl1Q9CQI6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cotl1Q9CQI6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cotl1Q9CQI6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cotl1Q9CQI6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cotl1Q9CQI6 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.98■■□□□ 1.11
Cotl1Q9CQI6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cotl1Q9CQI6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cotl1Q9CQI6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21.95■■□□□ 1.1
Cotl1Q9CQI6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cotl1Q9CQI6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cotl1Q9CQI6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cotl1Q9CQI6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.82■■□□□ 1.08
Cotl1Q9CQI6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cotl1Q9CQI6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Cotl1Q9CQI6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cotl1Q9CQI6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cotl1Q9CQI6 Zxda-201ENSMUST00000117281 2621 ntBASIC21.78■■□□□ 1.08
Cotl1Q9CQI6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cotl1Q9CQI6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cotl1Q9CQI6 Gm23366-201ENSMUST00000175022 89 ntBASIC21.77■■□□□ 1.08
Cotl1Q9CQI6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Cotl1Q9CQI6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cotl1Q9CQI6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cotl1Q9CQI6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cotl1Q9CQI6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cotl1Q9CQI6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cotl1Q9CQI6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cotl1Q9CQI6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cotl1Q9CQI6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.52■■□□□ 1.04
Cotl1Q9CQI6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cotl1Q9CQI6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cotl1Q9CQI6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cotl1Q9CQI6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.44■■□□□ 1.02
Cotl1Q9CQI6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.43■■□□□ 1.02
Cotl1Q9CQI6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.42■■□□□ 1.02
Cotl1Q9CQI6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cotl1Q9CQI6 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.37■■□□□ 1.01
Cotl1Q9CQI6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.36■■□□□ 1.01
Cotl1Q9CQI6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.31■■□□□ 1
Cotl1Q9CQI6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cotl1Q9CQI6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.31■■□□□ 1
Cotl1Q9CQI6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cotl1Q9CQI6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cotl1Q9CQI6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cotl1Q9CQI6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cotl1Q9CQI6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cotl1Q9CQI6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cotl1Q9CQI6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Cotl1Q9CQI6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Cotl1Q9CQI6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cotl1Q9CQI6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cotl1Q9CQI6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cotl1Q9CQI6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cotl1Q9CQI6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cotl1Q9CQI6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cotl1Q9CQI6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cotl1Q9CQI6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cotl1Q9CQI6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cotl1Q9CQI6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.86■□□□□ 0.93
Cotl1Q9CQI6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cotl1Q9CQI6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms