Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Gm25239-201ENSMUST00000174915 86 ntBASIC25,93■■□□□ 1,74
Cotl1Q9CQI6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25,54■■□□□ 1,68
Cotl1Q9CQI6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25,06■■□□□ 1,6
Cotl1Q9CQI6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24,66■■□□□ 1,54
Cotl1Q9CQI6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24,3■■□□□ 1,48
Cotl1Q9CQI6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24,19■■□□□ 1,46
Cotl1Q9CQI6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24,04■■□□□ 1,44
Cotl1Q9CQI6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23,95■■□□□ 1,42
Cotl1Q9CQI6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23,79■■□□□ 1,4
Cotl1Q9CQI6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23,72■■□□□ 1,39
Cotl1Q9CQI6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23,5■■□□□ 1,35
Cotl1Q9CQI6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23,36■■□□□ 1,33
Cotl1Q9CQI6 Psd-208ENSMUST00000224556 2034 ntBASIC23,33■■□□□ 1,32
Cotl1Q9CQI6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23,28■■□□□ 1,32
Cotl1Q9CQI6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23,27■■□□□ 1,32
Cotl1Q9CQI6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23,21■■□□□ 1,31
Cotl1Q9CQI6 Gm15042-201ENSMUST00000120212 883 ntBASIC23,21■■□□□ 1,31
Cotl1Q9CQI6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22,98■■□□□ 1,27
Cotl1Q9CQI6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22,96■■□□□ 1,27
Cotl1Q9CQI6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22,86■■□□□ 1,25
Cotl1Q9CQI6 Gm15045-201ENSMUST00000117359 883 ntBASIC22,73■■□□□ 1,23
Cotl1Q9CQI6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22,7■■□□□ 1,22
Cotl1Q9CQI6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22,62■■□□□ 1,21
Cotl1Q9CQI6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,52■■□□□ 1,2
Cotl1Q9CQI6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22,5■■□□□ 1,19
Cotl1Q9CQI6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22,49■■□□□ 1,19
Cotl1Q9CQI6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22,48■■□□□ 1,19
Cotl1Q9CQI6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22,42■■□□□ 1,18
Cotl1Q9CQI6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22,34■■□□□ 1,17
Cotl1Q9CQI6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22,33■■□□□ 1,17
Cotl1Q9CQI6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22,32■■□□□ 1,16
Cotl1Q9CQI6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22,32■■□□□ 1,16
Cotl1Q9CQI6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22,3■■□□□ 1,16
Cotl1Q9CQI6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22,29■■□□□ 1,16
Cotl1Q9CQI6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22,28■■□□□ 1,16
Cotl1Q9CQI6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22,26■■□□□ 1,15
Cotl1Q9CQI6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22,24■■□□□ 1,15
Cotl1Q9CQI6 Gm24109-201ENSMUST00000175489 103 ntBASIC22,18■■□□□ 1,14
Cotl1Q9CQI6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22,07■■□□□ 1,12
Cotl1Q9CQI6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22,05■■□□□ 1,12
Cotl1Q9CQI6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22,05■■□□□ 1,12
Cotl1Q9CQI6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22,04■■□□□ 1,12
Cotl1Q9CQI6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22,01■■□□□ 1,11
Cotl1Q9CQI6 Gm42596-201ENSMUST00000196305 1958 ntBASIC21,98■■□□□ 1,11
Cotl1Q9CQI6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21,98■■□□□ 1,11
Cotl1Q9CQI6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21,97■■□□□ 1,11
Cotl1Q9CQI6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC21,95■■□□□ 1,1
Cotl1Q9CQI6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21,95■■□□□ 1,1
Cotl1Q9CQI6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21,93■■□□□ 1,1
Cotl1Q9CQI6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21,83■■□□□ 1,09
Cotl1Q9CQI6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21,82■■□□□ 1,08
Cotl1Q9CQI6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21,81■■□□□ 1,08
Cotl1Q9CQI6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21,81■■□□□ 1,08
Cotl1Q9CQI6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21,8■■□□□ 1,08
Cotl1Q9CQI6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21,8■■□□□ 1,08
Cotl1Q9CQI6 Zxda-201ENSMUST00000117281 2621 ntBASIC21,78■■□□□ 1,08
Cotl1Q9CQI6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21,78■■□□□ 1,08
Cotl1Q9CQI6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21,78■■□□□ 1,08
Cotl1Q9CQI6 Gm23366-201ENSMUST00000175022 89 ntBASIC21,77■■□□□ 1,08
Cotl1Q9CQI6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21,77■■□□□ 1,07
Cotl1Q9CQI6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21,72■■□□□ 1,07
Cotl1Q9CQI6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21,67■■□□□ 1,06
Cotl1Q9CQI6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21,61■■□□□ 1,05
Cotl1Q9CQI6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21,6■■□□□ 1,05
Cotl1Q9CQI6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21,56■■□□□ 1,04
Cotl1Q9CQI6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21,55■■□□□ 1,04
Cotl1Q9CQI6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21,54■■□□□ 1,04
Cotl1Q9CQI6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21,52■■□□□ 1,04
Cotl1Q9CQI6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21,49■■□□□ 1,03
Cotl1Q9CQI6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21,47■■□□□ 1,03
Cotl1Q9CQI6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21,47■■□□□ 1,03
Cotl1Q9CQI6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21,44■■□□□ 1,02
Cotl1Q9CQI6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21,43■■□□□ 1,02
Cotl1Q9CQI6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21,42■■□□□ 1,02
Cotl1Q9CQI6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21,37■■□□□ 1,01
Cotl1Q9CQI6 Gm10524-201ENSMUST00000181931 1893 ntBASIC21,37■■□□□ 1,01
Cotl1Q9CQI6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21,36■■□□□ 1,01
Cotl1Q9CQI6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21,31■■□□□ 1
Cotl1Q9CQI6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21,31■■□□□ 1
Cotl1Q9CQI6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21,31■■□□□ 1
Cotl1Q9CQI6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21,29■■□□□ 1
Cotl1Q9CQI6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21,29■■□□□ 1
Cotl1Q9CQI6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21,23■□□□□ 0,99
Cotl1Q9CQI6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21,22■□□□□ 0,99
Cotl1Q9CQI6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21,2■□□□□ 0,98
Cotl1Q9CQI6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21,15■□□□□ 0,98
Cotl1Q9CQI6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21,12■□□□□ 0,97
Cotl1Q9CQI6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21,08■□□□□ 0,96
Cotl1Q9CQI6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21,06■□□□□ 0,96
Cotl1Q9CQI6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21,05■□□□□ 0,96
Cotl1Q9CQI6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20,99■□□□□ 0,95
Cotl1Q9CQI6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20,96■□□□□ 0,95
Cotl1Q9CQI6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20,94■□□□□ 0,94
Cotl1Q9CQI6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20,92■□□□□ 0,94
Cotl1Q9CQI6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20,9■□□□□ 0,94
Cotl1Q9CQI6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20,89■□□□□ 0,93
Cotl1Q9CQI6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20,88■□□□□ 0,93
Cotl1Q9CQI6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20,86■□□□□ 0,93
Cotl1Q9CQI6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20,83■□□□□ 0,92
Cotl1Q9CQI6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20,82■□□□□ 0,92
Retrieved 100 of 76,532 protein–RNA pairs in 27,9 ms