RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 Crlf1Q9JM58 425 aa9.28□□□□□ -0.92
Lig3-202ENSMUST00000080461 Rabac1Q9Z0S9 185 aa9.28□□□□□ -0.92
Lig3-202ENSMUST00000080461 Trav9-2A0A075B647 113 aa9.28□□□□□ -0.92
Lig3-202ENSMUST00000080461 Trav9-4A0A0B4J1K2 113 aa9.28□□□□□ -0.92
Lig3-202ENSMUST00000080461 Rps20P60867 119 aaKnown RBP9.28□□□□□ -0.92
Lig3-202ENSMUST00000080461 Tmem241Q3UME2 297 aa9.28□□□□□ -0.92
Lig3-202ENSMUST00000080461 Khdc1aQ3UWR2 166 aa9.28□□□□□ -0.92
Lig3-202ENSMUST00000080461 Gm94Q3V2D2 93 aa9.28□□□□□ -0.92
Lig3-202ENSMUST00000080461 P01756 117 aa9.27□□□□□ -0.93
Lig3-202ENSMUST00000080461 P01757 117 aa9.27□□□□□ -0.93
Lig3-202ENSMUST00000080461 Hspe1Q64433 102 aaKnown RBP9.27□□□□□ -0.93
Lig3-202ENSMUST00000080461 Klf13Q9JJZ6 289 aa9.27□□□□□ -0.93
Lig3-202ENSMUST00000080461 PdfS4R2K0 231 aa9.27□□□□□ -0.93
Lig3-202ENSMUST00000080461 Ighv2-7A0A075B5Q8 116 aa9.27□□□□□ -0.93
Lig3-202ENSMUST00000080461 Trav12-3A0A075B648 115 aa9.27□□□□□ -0.93
Lig3-202ENSMUST00000080461 1520401A03RikA0A0J9YVH6 598 aa9.27□□□□□ -0.93
Lig3-202ENSMUST00000080461 LhbO09108 141 aa9.27□□□□□ -0.93
Lig3-202ENSMUST00000080461 Ndufa4l2Q4FZG9 87 aa9.27□□□□□ -0.93
Lig3-202ENSMUST00000080461 Rnf185Q91YT2 192 aa9.27□□□□□ -0.93
Lig3-202ENSMUST00000080461 Gkn1Q9CR36 201 aa9.27□□□□□ -0.93
Lig3-202ENSMUST00000080461 PpbpQ9EQI5 113 aa9.27□□□□□ -0.93
Lig3-202ENSMUST00000080461 Gm29666A0A087WQ99 126 aa9.26□□□□□ -0.93
Lig3-202ENSMUST00000080461 Psmb8P28063 276 aa9.26□□□□□ -0.93
Lig3-202ENSMUST00000080461 Cml3Q9JIY8 226 aa9.26□□□□□ -0.93
Lig3-202ENSMUST00000080461 Gm15294V9GXA7 121 aa9.26□□□□□ -0.93
Lig3-202ENSMUST00000080461 Ighv1-50A0A075B5W1 117 aa9.26□□□□□ -0.93
Lig3-202ENSMUST00000080461 A0A1Y7VMQ4 148 aa9.26□□□□□ -0.93
Lig3-202ENSMUST00000080461 P01736 120 aa9.26□□□□□ -0.93
Lig3-202ENSMUST00000080461 Rab4aP56371 218 aa9.26□□□□□ -0.93
Lig3-202ENSMUST00000080461 Gm1968Q3T9I3 115 aa9.26□□□□□ -0.93
Lig3-202ENSMUST00000080461 PdpnQ62011 172 aa9.26□□□□□ -0.93
Lig3-202ENSMUST00000080461 Olfr312Q7TRZ9 308 aa9.26□□□□□ -0.93
Lig3-202ENSMUST00000080461 Gm5148Q8BGG2 154 aa9.26□□□□□ -0.93
Lig3-202ENSMUST00000080461 Gtsf1lQ9CWD0 151 aa9.26□□□□□ -0.93
Lig3-202ENSMUST00000080461 RhohQ9D3G9 191 aa9.26□□□□□ -0.93
Lig3-202ENSMUST00000080461 Atg101Q9D8Z6 218 aa9.26□□□□□ -0.93
Lig3-202ENSMUST00000080461 Nit2Q9JHW2 276 aa9.26□□□□□ -0.93
Lig3-202ENSMUST00000080461 Fhl2O70433 279 aa9.25□□□□□ -0.93
Lig3-202ENSMUST00000080461 Gm28305F6U473 122 aa9.25□□□□□ -0.93
Lig3-202ENSMUST00000080461 Fabp4P04117 132 aa9.25□□□□□ -0.93
Lig3-202ENSMUST00000080461 Khdc1cQ4KL78 166 aa9.25□□□□□ -0.93
Lig3-202ENSMUST00000080461 Megf10Q6DIB5 1147 aa9.25□□□□□ -0.93
Lig3-202ENSMUST00000080461 Sertad4A7DTG3 377 aa9.25□□□□□ -0.93
Lig3-202ENSMUST00000080461 Aqp7O54794 303 aa9.25□□□□□ -0.93
Lig3-202ENSMUST00000080461 Ighv1-23A0A0A6YVW3 117 aa9.24□□□□□ -0.93
Lig3-202ENSMUST00000080461 Gm9767G3X930 207 aa9.24□□□□□ -0.93
Lig3-202ENSMUST00000080461 TshbP12656 138 aa9.24□□□□□ -0.93
Lig3-202ENSMUST00000080461 SbsponQ3UPR9 264 aa9.24□□□□□ -0.93
Lig3-202ENSMUST00000080461 Spag11Q8K4N2 71 aa9.24□□□□□ -0.93
Lig3-202ENSMUST00000080461 Dusp14Q9JLY7 198 aa9.24□□□□□ -0.93
Lig3-202ENSMUST00000080461 Brwd1Q921C3 2304 aa9.24□□□□□ -0.93
Lig3-202ENSMUST00000080461 Gm3233E9Q2H5 230 aa9.24□□□□□ -0.93
Lig3-202ENSMUST00000080461 Snrpd3P62320 126 aaKnown RBP9.24□□□□□ -0.93
Lig3-202ENSMUST00000080461 Hivep3A2A884 2348 aa9.24□□□□□ -0.93
Lig3-202ENSMUST00000080461 Ighv2-3A0A075B696 115 aa9.23□□□□□ -0.93
Lig3-202ENSMUST00000080461 Olfr869E9PX82 323 aa9.23□□□□□ -0.93
Lig3-202ENSMUST00000080461 Tex26Q0VB26 296 aa9.23□□□□□ -0.93
Lig3-202ENSMUST00000080461 Gpr82Q8BZR0 328 aa9.23□□□□□ -0.93
Lig3-202ENSMUST00000080461 Fam213bQ9DB60 201 aa9.23□□□□□ -0.93
Lig3-202ENSMUST00000080461 NipblQ6KCD5 2798 aaKnown RBP9.23□□□□□ -0.93
Lig3-202ENSMUST00000080461 S100a4P07091 101 aa9.23□□□□□ -0.93
Lig3-202ENSMUST00000080461 Psmg4P0C7N9 123 aa9.23□□□□□ -0.93
Lig3-202ENSMUST00000080461 Klk7Q91VE3 249 aa9.23□□□□□ -0.93
Lig3-202ENSMUST00000080461 Fam241bQ9D882 120 aa9.23□□□□□ -0.93
Lig3-202ENSMUST00000080461 Ramp1Q9WTJ5 148 aa9.23□□□□□ -0.93
Lig3-202ENSMUST00000080461 Ighv9-1A0A0B4J1P3 117 aa9.23□□□□□ -0.93
Lig3-202ENSMUST00000080461 Trav14n-2A0A0G2JDF5 121 aa9.23□□□□□ -0.93
Lig3-202ENSMUST00000080461 4930447F04RikA2AFR2 126 aa9.23□□□□□ -0.93
Lig3-202ENSMUST00000080461 CnfnQ6PCW6 111 aa9.23□□□□□ -0.93
Lig3-202ENSMUST00000080461 Foxi1Q922I5 372 aa9.23□□□□□ -0.93
Lig3-202ENSMUST00000080461 Mrpl36Q99N90 102 aa9.23□□□□□ -0.93
Lig3-202ENSMUST00000080461 Ube2tQ9CQ37 204 aa9.23□□□□□ -0.93
Lig3-202ENSMUST00000080461 Helz2E9QAM5 2947 aaKnown RBP9.22□□□□□ -0.93
Lig3-202ENSMUST00000080461 Ighv5-9-1A0A0A6YVS4 126 aa9.22□□□□□ -0.93
Lig3-202ENSMUST00000080461 A0A286YCQ8 80 aa9.22□□□□□ -0.93
Lig3-202ENSMUST00000080461 7420426K07RikQ3UX66 186 aa9.22□□□□□ -0.93
Lig3-202ENSMUST00000080461 Olfr322Q5NCC8 327 aa9.22□□□□□ -0.93
Lig3-202ENSMUST00000080461 Gm16223Q8CBM3 117 aa9.22□□□□□ -0.93
Lig3-202ENSMUST00000080461 Fam216aQ9DB54 251 aa9.22□□□□□ -0.93
Lig3-202ENSMUST00000080461 Notch3Q61982 2318 aa9.22□□□□□ -0.93
Lig3-202ENSMUST00000080461 Scgb1b15A0A087WP50 93 aa9.22□□□□□ -0.93
Lig3-202ENSMUST00000080461 Gm17359A0A0G2JEB7 487 aa9.22□□□□□ -0.93
Lig3-202ENSMUST00000080461 Gm28038F7BCN9 126 aa9.22□□□□□ -0.93
Lig3-202ENSMUST00000080461 Rnf152Q8BG47 203 aa9.22□□□□□ -0.93
Lig3-202ENSMUST00000080461 1810032O08RikE9PZV8 113 aa9.21□□□□□ -0.93
Lig3-202ENSMUST00000080461 TctaQ8VEA7 122 aa9.21□□□□□ -0.93
Lig3-202ENSMUST00000080461 Card19Q9D1I2 183 aa9.21□□□□□ -0.93
Lig3-202ENSMUST00000080461 Zfp867E9Q2M4 473 aa9.21□□□□□ -0.94
Lig3-202ENSMUST00000080461 Emp2O88662 172 aa9.21□□□□□ -0.94
Lig3-202ENSMUST00000080461 Dkk2Q9QYZ8 259 aa9.21□□□□□ -0.94
Lig3-202ENSMUST00000080461 Trbv13-1A0A0B4J1P8 112 aa9.2□□□□□ -0.94
Lig3-202ENSMUST00000080461 Gm2564F6Z9S8 108 aa9.2□□□□□ -0.94
Lig3-202ENSMUST00000080461 Ccl19O70460 108 aa9.2□□□□□ -0.94
Lig3-202ENSMUST00000080461 Thy1P01831 162 aa9.2□□□□□ -0.94
Lig3-202ENSMUST00000080461 Slc16a4Q8R0M8 500 aa9.2□□□□□ -0.94
Lig3-202ENSMUST00000080461 Ube2cQ9D1C1 179 aa9.2□□□□□ -0.94
Lig3-202ENSMUST00000080461 Gphb5Q812B2 130 aa9.2□□□□□ -0.94
Lig3-202ENSMUST00000080461 5930422O12RikQ8C4Y4 123 aa9.2□□□□□ -0.94
Lig3-202ENSMUST00000080461 Ighv1-75A0A075B5Y2 117 aa9.19□□□□□ -0.94
Lig3-202ENSMUST00000080461 Ighv3-3A0A0A6YWL2 116 aa9.19□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 79.9 ms