RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 NischQ80TM9 1593 aa25.7■■□□□ 1.7
Lig3-202ENSMUST00000080461 Gm35339A0A140LHH9 1649 aa25.69■■□□□ 1.7
Lig3-202ENSMUST00000080461 Abcc9P70170 1546 aa24.97■■□□□ 1.59
Lig3-202ENSMUST00000080461 Abcc8B2RUS7 1588 aa24.61■■□□□ 1.53
Lig3-202ENSMUST00000080461 ScribQ80U72 1612 aa23.23■■□□□ 1.31
Lig3-202ENSMUST00000080461 Rhox8Q6VSS7 320 aa22.98■■□□□ 1.27
Lig3-202ENSMUST00000080461 Dcaf1Q80TR8 1506 aa22.92■■□□□ 1.26
Lig3-202ENSMUST00000080461 Kdm5dQ62240 1548 aa22.65■■□□□ 1.22
Lig3-202ENSMUST00000080461 NacadQ5SWP3 1504 aa22.59■■□□□ 1.21
Lig3-202ENSMUST00000080461 Rb1cc1Q9ESK9 1588 aa22.47■■□□□ 1.19
Lig3-202ENSMUST00000080461 Rtl1Q7M732 1744 aa22.38■■□□□ 1.17
Lig3-202ENSMUST00000080461 Ccdc180J3QNE4 1664 aa22.36■■□□□ 1.17
Lig3-202ENSMUST00000080461 Baz1aO88379 1555 aa22.22■■□□□ 1.15
Lig3-202ENSMUST00000080461 Sycp2Q9CUU3 1500 aa22.11■■□□□ 1.13
Lig3-202ENSMUST00000080461 Crybg2B7ZCC2 1516 aa22.02■■□□□ 1.12
Lig3-202ENSMUST00000080461 Zcchc6Q5BLK4 1491 aaKnown RBP21.71■■□□□ 1.07
Lig3-202ENSMUST00000080461 BicraF8VPZ9 1578 aa21.68■■□□□ 1.06
Lig3-202ENSMUST00000080461 Smarca2Q6DIC0 1577 aa21.67■■□□□ 1.06
Lig3-202ENSMUST00000080461 Ccdc136Q3TVA9 1136 aa21.39■■□□□ 1.01
Lig3-202ENSMUST00000080461 Cecr2E9Q2Z1 1453 aa21.23■□□□□ 0.99
Lig3-202ENSMUST00000080461 Trim41Q5NCC3 630 aa21.11■□□□□ 0.97
Lig3-202ENSMUST00000080461 Brd4Q9ESU6 1400 aaKnown RBP21.08■□□□□ 0.97
Lig3-202ENSMUST00000080461 Smarca4Q3TKT4 1613 aaKnown RBP21.02■□□□□ 0.96
Lig3-202ENSMUST00000080461 Synj1Q8CHC4 1574 aa20.96■□□□□ 0.95
Lig3-202ENSMUST00000080461 CftrP26361 1476 aa20.91■□□□□ 0.94
Lig3-202ENSMUST00000080461 Cttnbp2B9EJA2 1648 aa20.87■□□□□ 0.93
Lig3-202ENSMUST00000080461 Pds5bQ4VA53 1446 aaKnown RBP20.85■□□□□ 0.93
Lig3-202ENSMUST00000080461 Atad2bE9Q166 1460 aaKnown RBP20.85■□□□□ 0.93
Lig3-202ENSMUST00000080461 HrcG5E8J6 738 aa20.82■□□□□ 0.92
Lig3-202ENSMUST00000080461 Iqgap2Q3UQ44 1575 aa20.79■□□□□ 0.92
Lig3-202ENSMUST00000080461 Golga3P55937 1487 aa20.66■□□□□ 0.9
Lig3-202ENSMUST00000080461 Top2bQ64511 1612 aa20.56■□□□□ 0.88
Lig3-202ENSMUST00000080461 Esf1Q3V1V3 845 aaKnown RBP20.54■□□□□ 0.88
Lig3-202ENSMUST00000080461 Cngb1E1AZ71 1325 aa20.51■□□□□ 0.87
Lig3-202ENSMUST00000080461 Wdr62Q3U3T8 1523 aa20.48■□□□□ 0.87
Lig3-202ENSMUST00000080461 Frmpd1A2AKB4 1549 aa20.45■□□□□ 0.86
Lig3-202ENSMUST00000080461 Ercc6F8VPZ5 1481 aa20.42■□□□□ 0.86
Lig3-202ENSMUST00000080461 Cep164Q5DU05 1446 aa20.41■□□□□ 0.86
Lig3-202ENSMUST00000080461 Thoc2B1AZI6 1594 aaKnown RBP20.38■□□□□ 0.85
Lig3-202ENSMUST00000080461 Rsf1E9PWW9 1441 aaKnown RBP20.37■□□□□ 0.85
Lig3-202ENSMUST00000080461 Ccdc88bQ4QRL3 1481 aa20.33■□□□□ 0.85
Lig3-202ENSMUST00000080461 Ehmt2Q9Z148 1263 aaKnown RBP20.32■□□□□ 0.84
Lig3-202ENSMUST00000080461 Cc2d2aQ8CFW7 1633 aa20.31■□□□□ 0.84
Lig3-202ENSMUST00000080461 Chic1Q8CBW7 227 aa20.29■□□□□ 0.84
Lig3-202ENSMUST00000080461 Fmn1Q05860 1466 aa20.25■□□□□ 0.83
Lig3-202ENSMUST00000080461 Unc13aQ4KUS2 1712 aa20.25■□□□□ 0.83
Lig3-202ENSMUST00000080461 TnnQ80Z71 1560 aa20.15■□□□□ 0.82
Lig3-202ENSMUST00000080461 Phldb1Q6PDH0 1371 aaKnown RBP20.12■□□□□ 0.81
Lig3-202ENSMUST00000080461 Lamc3Q9R0B6 1581 aa20.11■□□□□ 0.81
Lig3-202ENSMUST00000080461 Fam135aQ6NS59 1506 aa20.09■□□□□ 0.81
Lig3-202ENSMUST00000080461 Gab3Q8BSM5 595 aa20.09■□□□□ 0.81
Lig3-202ENSMUST00000080461 Top2aQ01320 1528 aaKnown RBP20.05■□□□□ 0.8
Lig3-202ENSMUST00000080461 Kif15Q6P9L6 1387 aa19.97■□□□□ 0.79
Lig3-202ENSMUST00000080461 Ubl4bQ9CQ84 188 aa19.88■□□□□ 0.77
Lig3-202ENSMUST00000080461 Baz1bQ9Z277 1479 aa19.86■□□□□ 0.77
Lig3-202ENSMUST00000080461 Camsap1A2AHC3 1581 aa19.84■□□□□ 0.77
Lig3-202ENSMUST00000080461 Rapgef2Q8CHG7 1496 aa19.81■□□□□ 0.76
Lig3-202ENSMUST00000080461 Dnajc5bQ9CQ94 199 aa19.79■□□□□ 0.76
Lig3-202ENSMUST00000080461 Cux2P70298 1426 aa19.78■□□□□ 0.76
Lig3-202ENSMUST00000080461 Ccdc18Q640L5 1455 aa19.77■□□□□ 0.76
Lig3-202ENSMUST00000080461 NrkQ9R0G8 1455 aa19.66■□□□□ 0.74
Lig3-202ENSMUST00000080461 Il27Q8K3I6 234 aa19.66■□□□□ 0.74
Lig3-202ENSMUST00000080461 Grin2bQ01097 1482 aa19.65■□□□□ 0.74
Lig3-202ENSMUST00000080461 Cep162Q6ZQ06 1403 aa19.63■□□□□ 0.73
Lig3-202ENSMUST00000080461 Eif4g1Q6NZJ6 1600 aaKnown RBP19.62■□□□□ 0.73
Lig3-202ENSMUST00000080461 Mrc2Q64449 1479 aa19.61■□□□□ 0.73
Lig3-202ENSMUST00000080461 Npm1Q61937 292 aaKnown RBP19.61■□□□□ 0.73
Lig3-202ENSMUST00000080461 PtprkP35822 1457 aa19.6■□□□□ 0.73
Lig3-202ENSMUST00000080461 Shroom4Q1W617 1475 aa19.6■□□□□ 0.73
Lig3-202ENSMUST00000080461 Acin1Q9JIX8 1338 aaKnown RBP19.58■□□□□ 0.73
Lig3-202ENSMUST00000080461 LrpprcQ6PB66 1392 aaKnown RBP19.55■□□□□ 0.72
Lig3-202ENSMUST00000080461 Npm2Q80W85 207 aa19.53■□□□□ 0.72
Lig3-202ENSMUST00000080461 PogzQ8BZH4 1409 aaKnown RBP19.51■□□□□ 0.71
Lig3-202ENSMUST00000080461 Arhgap35Q91YM2 1499 aa19.48■□□□□ 0.71
Lig3-202ENSMUST00000080461 Efcab5A0JP43 1406 aa19.48■□□□□ 0.71
Lig3-202ENSMUST00000080461 Kif21aQ9QXL2 1672 aa19.45■□□□□ 0.7
Lig3-202ENSMUST00000080461 Duox2A2AQ99 1517 aa19.44■□□□□ 0.7
Lig3-202ENSMUST00000080461 Dhx29Q6PGC1 1365 aaKnown RBP19.42■□□□□ 0.7
Lig3-202ENSMUST00000080461 Map3k1P53349 1493 aa19.42■□□□□ 0.7
Lig3-202ENSMUST00000080461 Myt1lP97500 1187 aa19.42■□□□□ 0.7
Lig3-202ENSMUST00000080461 Rpgrip1Q9EPQ2 1331 aa19.39■□□□□ 0.69
Lig3-202ENSMUST00000080461 Mroh2bQ7M6Y6 1581 aa19.39■□□□□ 0.69
Lig3-202ENSMUST00000080461 Crocc2F6XLV1 1638 aa19.36■□□□□ 0.69
Lig3-202ENSMUST00000080461 Samd9lQ69Z37 1561 aa19.31■□□□□ 0.68
Lig3-202ENSMUST00000080461 AqrQ8CFQ3 1481 aaKnown RBP19.29■□□□□ 0.68
Lig3-202ENSMUST00000080461 Clip1Q922J3 1391 aa19.26■□□□□ 0.67
Lig3-202ENSMUST00000080461 SynmQ70IV5 1561 aa19.24■□□□□ 0.67
Lig3-202ENSMUST00000080461 Zeb1Q64318 1117 aa19.23■□□□□ 0.67
Lig3-202ENSMUST00000080461 Plb1Q3TTY0 1478 aa19.2■□□□□ 0.66
Lig3-202ENSMUST00000080461 Carmil1Q6EDY6 1374 aa19.19■□□□□ 0.66
Lig3-202ENSMUST00000080461 Urb2E9Q7L1 1524 aaKnown RBP19.18■□□□□ 0.66
Lig3-202ENSMUST00000080461 Eea1Q8BL66 1411 aa19.16■□□□□ 0.66
Lig3-202ENSMUST00000080461 Rad54l2Q99NG0 1466 aa19.15■□□□□ 0.66
Lig3-202ENSMUST00000080461 Lrriq1Q0P5X1 1673 aa19.14■□□□□ 0.65
Lig3-202ENSMUST00000080461 Erich3F6QRE9 1637 aa19.12■□□□□ 0.65
Lig3-202ENSMUST00000080461 Ankrd26Q811D2 1581 aa19.11■□□□□ 0.65
Lig3-202ENSMUST00000080461 UbtfP25976 765 aaKnown RBP19.1■□□□□ 0.65
Lig3-202ENSMUST00000080461 Disp1Q3TDN0 1521 aa19.09■□□□□ 0.65
Lig3-202ENSMUST00000080461 Magi3Q9EQJ9 1476 aa19.09■□□□□ 0.65
Lig3-202ENSMUST00000080461 Setd5Q5XJV7 1441 aa19.09■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms