RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Tcte2E9PY37 120 aa6.6□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Pate3B3GLJ3 98 aa6.6□□□□□ -1.35
Clcn3-202ENSMUST00000056508 ApelaP0DMC4 54 aa6.6□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Ube2d2bQ6ZWY6 147 aa6.6□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Fam216bQ8CC14 138 aa6.6□□□□□ -1.35
Clcn3-202ENSMUST00000056508 TifabQ8JZM6 147 aa6.6□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Vopp1Q8R1C3 172 aa6.6□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Arfgef2A2A5R2 1792 aa6.6□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Rnase4Q9JJH1 148 aa6.6□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Igkv4-91A0A075B5L2 119 aa6.59□□□□□ -1.35
Clcn3-202ENSMUST00000056508 P01631 113 aa6.59□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Ccdc88cQ6VGS5 2009 aa6.59□□□□□ -1.35
Clcn3-202ENSMUST00000056508 NdpP48744 131 aa6.59□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Q8VC23 124 aa6.59□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Trpm3Q5F4S9 1721 aa6.59□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Znfx1Q8R151 1909 aaKnown RBP6.59□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Ccl4P14097 92 aa6.59□□□□□ -1.35
Clcn3-202ENSMUST00000056508 4930518I15RikQ3V2W7 57 aa6.59□□□□□ -1.35
Clcn3-202ENSMUST00000056508 Myom1Q62234 1667 aaKnown RBP6.59□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Trav9d-4A0A0G2JG37 103 aa6.59□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Igkv15-103A0A140T8P3 115 aa6.59□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Hmga2P52927 108 aa6.59□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Tiam2Q6ZPF3 1715 aa6.58□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Igkv5-45A0A0B4J1J1 115 aa6.58□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Igkv5-39A0A0G2JDV4 115 aa6.58□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Gm8439G3UWA7 96 aa6.58□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Pate2Q3UW31 111 aa6.58□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Ly6aP05533 134 aa6.58□□□□□ -1.36
Clcn3-202ENSMUST00000056508 PpyP10601 100 aa6.58□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Ufsp1Q9CZP0 217 aa6.58□□□□□ -1.36
Clcn3-202ENSMUST00000056508 PinlypQ9CQD7 212 aa6.58□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Myo5bP21271 1818 aa6.58□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Trav9d-3A0A075B695 113 aa6.58□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Sned1Q70E20 1403 aa6.57□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Igkv3-3A0A140T8Q0 119 aa6.57□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Abca17E9PX95 1733 aa6.57□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Gm10770F7D043 238 aa6.57□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Edn3P48299 214 aa6.57□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Lmo4P61969 165 aa6.57□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Igkv4-50A0A0B4J1J0 117 aa6.57□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Igkv1-122A0A140T8M9 119 aa6.57□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Igkv5-43A0A0B4J1J2 115 aa6.56□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Higd1bQ99JY6 98 aa6.56□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Peak1Q69Z38 1735 aa6.56□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Ighv8-5A0A0A6YY60 119 aa6.56□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Gtsf1lQ9CWD0 151 aa6.56□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Igkv9-124A0A0G2JDR3 117 aa6.56□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Ighv8-4A0A0A6YW26 117 aa6.56□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Igkv14-130A0A0G2JF45 117 aa6.56□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Ccdc88aQ5SNZ0 1873 aa6.56□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Gli3Q61602 1583 aa6.55□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Scn7aB1AYL1 1681 aa6.55□□□□□ -1.36
Clcn3-202ENSMUST00000056508 NalcnQ8BXR5 1738 aa6.55□□□□□ -1.36
Clcn3-202ENSMUST00000056508 NhsB1AV60 1647 aa6.55□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Nsun4C4P6S0 806 aaKnown RBP6.55□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Q08AU9 97 aa6.55□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Cox17P56394 63 aa6.55□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Igkv12-98A0A0G2JGF9 115 aa6.55□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Fam19a2Q7TPG7 131 aa6.55□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Col5a2Q3U962 1497 aa6.55□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Bcl9lQ67FY2 1494 aa6.54□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Gm6594J3QM43 95 aa6.54□□□□□ -1.36
Clcn3-202ENSMUST00000056508 A830005F24RikQ8BRT5 167 aa6.54□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Mtcl1Q3UHU5 1945 aa6.54□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Kif13bA0A286YCV9 1847 aa6.54□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Ighv3-8A0A075B5T0 131 aa6.54□□□□□ -1.36
Clcn3-202ENSMUST00000056508 2210017I01RikA0A0A6YVV1 95 aa6.54□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Gm44790A0A0N4SV91 103 aa6.54□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Gm9767G3X930 207 aa6.54□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Scn3aA2ASI5 1947 aa6.54□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Fxyd1Q9Z239 92 aa6.54□□□□□ -1.36
Clcn3-202ENSMUST00000056508 P18527 97 aa6.53□□□□□ -1.36
Clcn3-202ENSMUST00000056508 C3P01027 1663 aa6.53□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Igkv4-71A0A0G2JEH0 117 aa6.53□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Igkv6-20A0A140T8P2 115 aa6.53□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Gm10570F6VB42 170 aa6.53□□□□□ -1.36
Clcn3-202ENSMUST00000056508 N4bp2F8VQG7 1678 aaKnown RBP6.53□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Col8a2P25318 699 aa6.53□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Casp8ap2Q9WUF3 1962 aa6.53□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Elof1P60003 83 aa6.53□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Gm9958Q8C9U4 106 aa6.53□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Defb7Q91V70 71 aa6.53□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Psors1c2Q80ZC9 134 aa6.52□□□□□ -1.36
Clcn3-202ENSMUST00000056508 Tet3Q8BG87 1668 aa6.52□□□□□ -1.37
Clcn3-202ENSMUST00000056508 D730048I06RikQ9CQB8 106 aa6.52□□□□□ -1.37
Clcn3-202ENSMUST00000056508 DptQ9QZZ6 201 aa6.52□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Ang3P97802 145 aa6.52□□□□□ -1.37
Clcn3-202ENSMUST00000056508 SrarpQ3ULG3 163 aa6.52□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Gpha2Q925Q5 128 aa6.52□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Ubr1O70481 1757 aa6.52□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Igkv3-12A0A140T8P0 119 aa6.52□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Znf22Q9ERU3 237 aa6.52□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Gm36368A0A1D5RLK8 91 aa6.51□□□□□ -1.37
Clcn3-202ENSMUST00000056508 A0A1L1SR50 188 aa6.51□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Fam104aA2A6P4 185 aa6.51□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Slurp2P0DP59 97 aa6.51□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Cpsf4lE9Q2N0 280 aa6.51□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Csrp3P50462 194 aa6.51□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Fhl1P97447 280 aaKnown RBP6.51□□□□□ -1.37
Clcn3-202ENSMUST00000056508 Cd52Q64389 74 aa6.51□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 94.9 ms