Protein–RNA interactions for Protein: A0A0G2JDV4

Igkv5-39, Immunoglobulin kappa variable 5-39 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-39A0A0G2JDV4 Gm25239-201ENSMUST00000174915 86 ntBASIC38.95■■■■□ 3.83
Igkv5-39A0A0G2JDV4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.95■■■■□ 3.35
Igkv5-39A0A0G2JDV4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
Igkv5-39A0A0G2JDV4 Gm15042-201ENSMUST00000120212 883 ntBASIC34.16■■■■□ 3.06
Igkv5-39A0A0G2JDV4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Igkv5-39A0A0G2JDV4 Gm24109-201ENSMUST00000175489 103 ntBASIC33.72■■■□□ 2.99
Igkv5-39A0A0G2JDV4 Gm15045-201ENSMUST00000117359 883 ntBASIC33.46■■■□□ 2.95
Igkv5-39A0A0G2JDV4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Igkv5-39A0A0G2JDV4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Igkv5-39A0A0G2JDV4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.99■■■□□ 2.87
Igkv5-39A0A0G2JDV4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
Igkv5-39A0A0G2JDV4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Igkv5-39A0A0G2JDV4 Gm23366-201ENSMUST00000175022 89 ntBASIC32.52■■■□□ 2.8
Igkv5-39A0A0G2JDV4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Igkv5-39A0A0G2JDV4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Igkv5-39A0A0G2JDV4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.89■■■□□ 2.69
Igkv5-39A0A0G2JDV4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Igkv5-39A0A0G2JDV4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Igkv5-39A0A0G2JDV4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Igkv5-39A0A0G2JDV4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
Igkv5-39A0A0G2JDV4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Igkv5-39A0A0G2JDV4 Psd-208ENSMUST00000224556 2034 ntBASIC31.44■■■□□ 2.62
Igkv5-39A0A0G2JDV4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Igkv5-39A0A0G2JDV4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Igkv5-39A0A0G2JDV4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.35■■■□□ 2.61
Igkv5-39A0A0G2JDV4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
Igkv5-39A0A0G2JDV4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Igkv5-39A0A0G2JDV4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.21■■■□□ 2.59
Igkv5-39A0A0G2JDV4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.2■■■□□ 2.59
Igkv5-39A0A0G2JDV4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
Igkv5-39A0A0G2JDV4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.97■■■□□ 2.55
Igkv5-39A0A0G2JDV4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Igkv5-39A0A0G2JDV4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Igkv5-39A0A0G2JDV4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Igkv5-39A0A0G2JDV4 Gm25238-201ENSMUST00000174914 89 ntBASIC30.71■■■□□ 2.51
Igkv5-39A0A0G2JDV4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.66■■■□□ 2.5
Igkv5-39A0A0G2JDV4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.63■■■□□ 2.49
Igkv5-39A0A0G2JDV4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Igkv5-39A0A0G2JDV4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Igkv5-39A0A0G2JDV4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Igkv5-39A0A0G2JDV4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Igkv5-39A0A0G2JDV4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Igkv5-39A0A0G2JDV4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Igkv5-39A0A0G2JDV4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.11■■■□□ 2.41
Igkv5-39A0A0G2JDV4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.09■■■□□ 2.41
Igkv5-39A0A0G2JDV4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.04■■■□□ 2.4
Igkv5-39A0A0G2JDV4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Igkv5-39A0A0G2JDV4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Igkv5-39A0A0G2JDV4 Gm27325-201ENSMUST00000175467 74 ntBASIC29.97■■■□□ 2.39
Igkv5-39A0A0G2JDV4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Igkv5-39A0A0G2JDV4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.87■■■□□ 2.37
Igkv5-39A0A0G2JDV4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Igkv5-39A0A0G2JDV4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.77■■■□□ 2.36
Igkv5-39A0A0G2JDV4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Igkv5-39A0A0G2JDV4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.68■■■□□ 2.34
Igkv5-39A0A0G2JDV4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.64■■■□□ 2.34
Igkv5-39A0A0G2JDV4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Igkv5-39A0A0G2JDV4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Igkv5-39A0A0G2JDV4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.61■■■□□ 2.33
Igkv5-39A0A0G2JDV4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Igkv5-39A0A0G2JDV4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.45■■■□□ 2.3
Igkv5-39A0A0G2JDV4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Igkv5-39A0A0G2JDV4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Igkv5-39A0A0G2JDV4 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.34■■■□□ 2.29
Igkv5-39A0A0G2JDV4 Rab21-202ENSMUST00000218831 843 ntBASIC29.33■■■□□ 2.29
Igkv5-39A0A0G2JDV4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Igkv5-39A0A0G2JDV4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Igkv5-39A0A0G2JDV4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Igkv5-39A0A0G2JDV4 Gm25262-201ENSMUST00000174934 133 ntBASIC29.3■■■□□ 2.28
Igkv5-39A0A0G2JDV4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Igkv5-39A0A0G2JDV4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
Igkv5-39A0A0G2JDV4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Igkv5-39A0A0G2JDV4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Igkv5-39A0A0G2JDV4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.21■■■□□ 2.27
Igkv5-39A0A0G2JDV4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.16■■■□□ 2.26
Igkv5-39A0A0G2JDV4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Igkv5-39A0A0G2JDV4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Igkv5-39A0A0G2JDV4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Igkv5-39A0A0G2JDV4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Igkv5-39A0A0G2JDV4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Igkv5-39A0A0G2JDV4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.03■■■□□ 2.24
Igkv5-39A0A0G2JDV4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29■■■□□ 2.23
Igkv5-39A0A0G2JDV4 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.98■■■□□ 2.23
Igkv5-39A0A0G2JDV4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.97■■■□□ 2.23
Igkv5-39A0A0G2JDV4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Igkv5-39A0A0G2JDV4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Igkv5-39A0A0G2JDV4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Igkv5-39A0A0G2JDV4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.84■■■□□ 2.21
Igkv5-39A0A0G2JDV4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.83■■■□□ 2.21
Igkv5-39A0A0G2JDV4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Igkv5-39A0A0G2JDV4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Igkv5-39A0A0G2JDV4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
Igkv5-39A0A0G2JDV4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Igkv5-39A0A0G2JDV4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Igkv5-39A0A0G2JDV4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.7■■■□□ 2.18
Igkv5-39A0A0G2JDV4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Igkv5-39A0A0G2JDV4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Igkv5-39A0A0G2JDV4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.54■■■□□ 2.16
Igkv5-39A0A0G2JDV4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.53■■■□□ 2.16
Igkv5-39A0A0G2JDV4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms