Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Gm25239-201ENSMUST00000174915 86 ntBASIC39,69■■■■□ 3,94
Igkv5-45A0A0B4J1J1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36,6■■■■□ 3,45
Igkv5-45A0A0B4J1J1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36,09■■■■□ 3,37
Igkv5-45A0A0B4J1J1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35,07■■■■□ 3,21
Igkv5-45A0A0B4J1J1 Gm15042-201ENSMUST00000120212 883 ntBASIC34,86■■■■□ 3,17
Igkv5-45A0A0B4J1J1 Gm24109-201ENSMUST00000175489 103 ntBASIC34,36■■■■□ 3,09
Igkv5-45A0A0B4J1J1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34,35■■■■□ 3,09
Igkv5-45A0A0B4J1J1 Gm15045-201ENSMUST00000117359 883 ntBASIC34,17■■■■□ 3,06
Igkv5-45A0A0B4J1J1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33,93■■■■□ 3,02
Igkv5-45A0A0B4J1J1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33,69■■■□□ 2,98
Igkv5-45A0A0B4J1J1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33,51■■■□□ 2,95
Igkv5-45A0A0B4J1J1 Gm23366-201ENSMUST00000175022 89 ntBASIC33,15■■■□□ 2,9
Igkv5-45A0A0B4J1J1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33,14■■■□□ 2,9
Igkv5-45A0A0B4J1J1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2,87
Igkv5-45A0A0B4J1J1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32,98■■■□□ 2,87
Igkv5-45A0A0B4J1J1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32,69■■■□□ 2,82
Igkv5-45A0A0B4J1J1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32,53■■■□□ 2,8
Igkv5-45A0A0B4J1J1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32,42■■■□□ 2,78
Igkv5-45A0A0B4J1J1 Psd-208ENSMUST00000224556 2034 ntBASIC32,39■■■□□ 2,78
Igkv5-45A0A0B4J1J1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32,32■■■□□ 2,77
Igkv5-45A0A0B4J1J1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32,31■■■□□ 2,76
Igkv5-45A0A0B4J1J1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32,22■■■□□ 2,75
Igkv5-45A0A0B4J1J1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32,16■■■□□ 2,74
Igkv5-45A0A0B4J1J1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32,14■■■□□ 2,74
Igkv5-45A0A0B4J1J1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32,07■■■□□ 2,72
Igkv5-45A0A0B4J1J1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32,04■■■□□ 2,72
Igkv5-45A0A0B4J1J1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31,99■■■□□ 2,71
Igkv5-45A0A0B4J1J1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31,96■■■□□ 2,71
Igkv5-45A0A0B4J1J1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31,84■■■□□ 2,69
Igkv5-45A0A0B4J1J1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31,77■■■□□ 2,68
Igkv5-45A0A0B4J1J1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31,5■■■□□ 2,63
Igkv5-45A0A0B4J1J1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31,44■■■□□ 2,62
Igkv5-45A0A0B4J1J1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31,41■■■□□ 2,62
Igkv5-45A0A0B4J1J1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31,41■■■□□ 2,62
Igkv5-45A0A0B4J1J1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31,41■■■□□ 2,62
Igkv5-45A0A0B4J1J1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31,38■■■□□ 2,61
Igkv5-45A0A0B4J1J1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31,35■■■□□ 2,61
Igkv5-45A0A0B4J1J1 Gm25238-201ENSMUST00000174914 89 ntBASIC31,29■■■□□ 2,6
Igkv5-45A0A0B4J1J1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31,21■■■□□ 2,59
Igkv5-45A0A0B4J1J1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31,2■■■□□ 2,59
Igkv5-45A0A0B4J1J1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31,15■■■□□ 2,58
Igkv5-45A0A0B4J1J1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30,88■■■□□ 2,53
Igkv5-45A0A0B4J1J1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30,83■■■□□ 2,53
Igkv5-45A0A0B4J1J1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30,82■■■□□ 2,53
Igkv5-45A0A0B4J1J1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30,78■■■□□ 2,52
Igkv5-45A0A0B4J1J1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30,72■■■□□ 2,51
Igkv5-45A0A0B4J1J1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30,69■■■□□ 2,5
Igkv5-45A0A0B4J1J1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30,68■■■□□ 2,5
Igkv5-45A0A0B4J1J1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30,63■■■□□ 2,49
Igkv5-45A0A0B4J1J1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30,62■■■□□ 2,49
Igkv5-45A0A0B4J1J1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30,61■■■□□ 2,49
Igkv5-45A0A0B4J1J1 Gm27325-201ENSMUST00000175467 74 ntBASIC30,6■■■□□ 2,49
Igkv5-45A0A0B4J1J1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30,47■■■□□ 2,47
Igkv5-45A0A0B4J1J1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30,39■■■□□ 2,45
Igkv5-45A0A0B4J1J1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30,35■■■□□ 2,45
Igkv5-45A0A0B4J1J1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30,35■■■□□ 2,45
Igkv5-45A0A0B4J1J1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30,27■■■□□ 2,44
Igkv5-45A0A0B4J1J1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30,22■■■□□ 2,43
Igkv5-45A0A0B4J1J1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30,21■■■□□ 2,43
Igkv5-45A0A0B4J1J1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30,2■■■□□ 2,43
Igkv5-45A0A0B4J1J1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30,15■■■□□ 2,42
Igkv5-45A0A0B4J1J1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30,15■■■□□ 2,42
Igkv5-45A0A0B4J1J1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30,14■■■□□ 2,42
Igkv5-45A0A0B4J1J1 Gm10524-201ENSMUST00000181931 1893 ntBASIC30,12■■■□□ 2,41
Igkv5-45A0A0B4J1J1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30,12■■■□□ 2,41
Igkv5-45A0A0B4J1J1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30,05■■■□□ 2,4
Igkv5-45A0A0B4J1J1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30,04■■■□□ 2,4
Igkv5-45A0A0B4J1J1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30,03■■■□□ 2,4
Igkv5-45A0A0B4J1J1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30,03■■■□□ 2,4
Igkv5-45A0A0B4J1J1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30,03■■■□□ 2,4
Igkv5-45A0A0B4J1J1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30,01■■■□□ 2,39
Igkv5-45A0A0B4J1J1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29,97■■■□□ 2,39
Igkv5-45A0A0B4J1J1 Rab21-202ENSMUST00000218831 843 ntBASIC29,91■■■□□ 2,38
Igkv5-45A0A0B4J1J1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29,9■■■□□ 2,38
Igkv5-45A0A0B4J1J1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29,88■■■□□ 2,37
Igkv5-45A0A0B4J1J1 Gm25262-201ENSMUST00000174934 133 ntBASIC29,82■■■□□ 2,36
Igkv5-45A0A0B4J1J1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29,8■■■□□ 2,36
Igkv5-45A0A0B4J1J1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29,78■■■□□ 2,36
Igkv5-45A0A0B4J1J1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29,75■■■□□ 2,35
Igkv5-45A0A0B4J1J1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29,74■■■□□ 2,35
Igkv5-45A0A0B4J1J1 Gm42596-201ENSMUST00000196305 1958 ntBASIC29,73■■■□□ 2,35
Igkv5-45A0A0B4J1J1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29,71■■■□□ 2,35
Igkv5-45A0A0B4J1J1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29,63■■■□□ 2,33
Igkv5-45A0A0B4J1J1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29,6■■■□□ 2,33
Igkv5-45A0A0B4J1J1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29,58■■■□□ 2,33
Igkv5-45A0A0B4J1J1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29,55■■■□□ 2,32
Igkv5-45A0A0B4J1J1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29,49■■■□□ 2,31
Igkv5-45A0A0B4J1J1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29,47■■■□□ 2,31
Igkv5-45A0A0B4J1J1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29,46■■■□□ 2,31
Igkv5-45A0A0B4J1J1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29,46■■■□□ 2,31
Igkv5-45A0A0B4J1J1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29,45■■■□□ 2,31
Igkv5-45A0A0B4J1J1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29,35■■■□□ 2,29
Igkv5-45A0A0B4J1J1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29,33■■■□□ 2,29
Igkv5-45A0A0B4J1J1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29,31■■■□□ 2,28
Igkv5-45A0A0B4J1J1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29,3■■■□□ 2,28
Igkv5-45A0A0B4J1J1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29,25■■■□□ 2,27
Igkv5-45A0A0B4J1J1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29,24■■■□□ 2,27
Igkv5-45A0A0B4J1J1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29,22■■■□□ 2,27
Igkv5-45A0A0B4J1J1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29,21■■■□□ 2,27
Igkv5-45A0A0B4J1J1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29,19■■■□□ 2,26
Retrieved 100 of 76,532 protein–RNA pairs in 11,4 ms