Protein–RNA interactions for Protein: P14097

Ccl4, C-C motif chemokine 4, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl4P14097 Gm25239-201ENSMUST00000174915 86 ntBASIC41,14■■■■■ 4,18
Ccl4P14097 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38,26■■■■□ 3,72
Ccl4P14097 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37,64■■■■□ 3,62
Ccl4P14097 Gm24109-201ENSMUST00000175489 103 ntBASIC35,87■■■■□ 3,33
Ccl4P14097 Gm15042-201ENSMUST00000120212 883 ntBASIC35,49■■■■□ 3,27
Ccl4P14097 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34,74■■■■□ 3,15
Ccl4P14097 Gm15045-201ENSMUST00000117359 883 ntBASIC34,64■■■■□ 3,14
Ccl4P14097 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34,64■■■■□ 3,14
Ccl4P14097 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34,6■■■■□ 3,13
Ccl4P14097 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34,3■■■■□ 3,08
Ccl4P14097 Gm23366-201ENSMUST00000175022 89 ntBASIC34,27■■■■□ 3,08
Ccl4P14097 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33,64■■■□□ 2,98
Ccl4P14097 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33,31■■■□□ 2,92
Ccl4P14097 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33,29■■■□□ 2,92
Ccl4P14097 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33,23■■■□□ 2,91
Ccl4P14097 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33,18■■■□□ 2,9
Ccl4P14097 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33,05■■■□□ 2,88
Ccl4P14097 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32,92■■■□□ 2,86
Ccl4P14097 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32,85■■■□□ 2,85
Ccl4P14097 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32,77■■■□□ 2,84
Ccl4P14097 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32,63■■■□□ 2,81
Ccl4P14097 Gm25238-201ENSMUST00000174914 89 ntBASIC32,63■■■□□ 2,81
Ccl4P14097 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32,62■■■□□ 2,81
Ccl4P14097 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32,61■■■□□ 2,81
Ccl4P14097 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32,22■■■□□ 2,75
Ccl4P14097 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31,99■■■□□ 2,71
Ccl4P14097 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31,9■■■□□ 2,7
Ccl4P14097 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31,9■■■□□ 2,7
Ccl4P14097 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31,83■■■□□ 2,69
Ccl4P14097 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31,81■■■□□ 2,68
Ccl4P14097 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31,8■■■□□ 2,68
Ccl4P14097 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31,63■■■□□ 2,65
Ccl4P14097 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31,63■■■□□ 2,65
Ccl4P14097 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31,63■■■□□ 2,65
Ccl4P14097 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31,58■■■□□ 2,65
Ccl4P14097 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31,49■■■□□ 2,63
Ccl4P14097 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31,46■■■□□ 2,63
Ccl4P14097 Gm25262-201ENSMUST00000174934 133 ntBASIC31,44■■■□□ 2,62
Ccl4P14097 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31,31■■■□□ 2,6
Ccl4P14097 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31,29■■■□□ 2,6
Ccl4P14097 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31,16■■■□□ 2,58
Ccl4P14097 Gm27325-201ENSMUST00000175467 74 ntBASIC31,02■■■□□ 2,56
Ccl4P14097 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30,96■■■□□ 2,55
Ccl4P14097 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30,92■■■□□ 2,54
Ccl4P14097 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30,92■■■□□ 2,54
Ccl4P14097 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30,87■■■□□ 2,53
Ccl4P14097 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30,87■■■□□ 2,53
Ccl4P14097 Gm26115-201ENSMUST00000175605 87 ntBASIC30,84■■■□□ 2,53
Ccl4P14097 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30,79■■■□□ 2,52
Ccl4P14097 Rab21-202ENSMUST00000218831 843 ntBASIC30,74■■■□□ 2,51
Ccl4P14097 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30,73■■■□□ 2,51
Ccl4P14097 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30,71■■■□□ 2,51
Ccl4P14097 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30,71■■■□□ 2,51
Ccl4P14097 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30,69■■■□□ 2,5
Ccl4P14097 Gm8109-201ENSMUST00000194076 746 ntBASIC30,65■■■□□ 2,5
Ccl4P14097 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30,62■■■□□ 2,49
Ccl4P14097 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30,57■■■□□ 2,48
Ccl4P14097 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30,56■■■□□ 2,48
Ccl4P14097 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30,52■■■□□ 2,48
Ccl4P14097 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30,5■■■□□ 2,47
Ccl4P14097 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30,47■■■□□ 2,47
Ccl4P14097 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30,4■■■□□ 2,46
Ccl4P14097 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30,37■■■□□ 2,45
Ccl4P14097 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30,27■■■□□ 2,44
Ccl4P14097 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30,15■■■□□ 2,42
Ccl4P14097 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30,14■■■□□ 2,42
Ccl4P14097 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30,14■■■□□ 2,41
Ccl4P14097 Psd-208ENSMUST00000224556 2034 ntBASIC30,06■■■□□ 2,4
Ccl4P14097 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30,02■■■□□ 2,4
Ccl4P14097 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29,95■■■□□ 2,38
Ccl4P14097 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29,94■■■□□ 2,38
Ccl4P14097 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29,92■■■□□ 2,38
Ccl4P14097 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29,9■■■□□ 2,38
Ccl4P14097 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29,88■■■□□ 2,37
Ccl4P14097 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29,87■■■□□ 2,37
Ccl4P14097 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29,87■■■□□ 2,37
Ccl4P14097 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29,85■■■□□ 2,37
Ccl4P14097 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29,84■■■□□ 2,37
Ccl4P14097 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29,82■■■□□ 2,36
Ccl4P14097 Gm17082-201ENSMUST00000166043 1091 ntBASIC29,76■■■□□ 2,35
Ccl4P14097 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29,74■■■□□ 2,35
Ccl4P14097 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29,72■■■□□ 2,35
Ccl4P14097 Gm24804-201ENSMUST00000174982 85 ntBASIC29,61■■■□□ 2,33
Ccl4P14097 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29,58■■■□□ 2,33
Ccl4P14097 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29,57■■■□□ 2,32
Ccl4P14097 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29,51■■■□□ 2,31
Ccl4P14097 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29,5■■■□□ 2,31
Ccl4P14097 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29,49■■■□□ 2,31
Ccl4P14097 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29,46■■■□□ 2,31
Ccl4P14097 Gm27322-201ENSMUST00000184007 104 ntBASIC29,45■■■□□ 2,31
Ccl4P14097 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29,44■■■□□ 2,3
Ccl4P14097 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29,44■■■□□ 2,3
Ccl4P14097 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29,42■■■□□ 2,3
Ccl4P14097 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29,37■■■□□ 2,29
Ccl4P14097 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29,36■■■□□ 2,29
Ccl4P14097 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29,34■■■□□ 2,29
Ccl4P14097 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29,31■■■□□ 2,28
Ccl4P14097 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29,3■■■□□ 2,28
Ccl4P14097 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29,29■■■□□ 2,28
Ccl4P14097 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29,25■■■□□ 2,27
Retrieved 100 of 76,532 protein–RNA pairs in 12,2 ms