Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Gm25239-201ENSMUST00000174915 86 ntBASIC39.54■■■■□ 3.92
Igkv5-43A0A0B4J1J2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.46■■■■□ 3.43
Igkv5-43A0A0B4J1J2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
Igkv5-43A0A0B4J1J2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Igkv5-43A0A0B4J1J2 Gm15042-201ENSMUST00000120212 883 ntBASIC34.76■■■■□ 3.16
Igkv5-43A0A0B4J1J2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Igkv5-43A0A0B4J1J2 Gm24109-201ENSMUST00000175489 103 ntBASIC34.22■■■■□ 3.07
Igkv5-43A0A0B4J1J2 Gm15045-201ENSMUST00000117359 883 ntBASIC34.08■■■■□ 3.05
Igkv5-43A0A0B4J1J2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.89■■■■□ 3.02
Igkv5-43A0A0B4J1J2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Igkv5-43A0A0B4J1J2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.38■■■□□ 2.93
Igkv5-43A0A0B4J1J2 Gm23366-201ENSMUST00000175022 89 ntBASIC33.02■■■□□ 2.88
Igkv5-43A0A0B4J1J2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
Igkv5-43A0A0B4J1J2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Igkv5-43A0A0B4J1J2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Igkv5-43A0A0B4J1J2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.62■■■□□ 2.81
Igkv5-43A0A0B4J1J2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Igkv5-43A0A0B4J1J2 Psd-208ENSMUST00000224556 2034 ntBASIC32.35■■■□□ 2.77
Igkv5-43A0A0B4J1J2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Igkv5-43A0A0B4J1J2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Igkv5-43A0A0B4J1J2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Igkv5-43A0A0B4J1J2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
Igkv5-43A0A0B4J1J2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
Igkv5-43A0A0B4J1J2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
Igkv5-43A0A0B4J1J2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32■■■□□ 2.71
Igkv5-43A0A0B4J1J2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Igkv5-43A0A0B4J1J2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.92■■■□□ 2.7
Igkv5-43A0A0B4J1J2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.86■■■□□ 2.69
Igkv5-43A0A0B4J1J2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
Igkv5-43A0A0B4J1J2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.63■■■□□ 2.65
Igkv5-43A0A0B4J1J2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Igkv5-43A0A0B4J1J2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.38■■■□□ 2.61
Igkv5-43A0A0B4J1J2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.36■■■□□ 2.61
Igkv5-43A0A0B4J1J2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Igkv5-43A0A0B4J1J2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Igkv5-43A0A0B4J1J2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Igkv5-43A0A0B4J1J2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Igkv5-43A0A0B4J1J2 Gm25238-201ENSMUST00000174914 89 ntBASIC31.17■■■□□ 2.58
Igkv5-43A0A0B4J1J2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Igkv5-43A0A0B4J1J2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Igkv5-43A0A0B4J1J2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.06■■■□□ 2.56
Igkv5-43A0A0B4J1J2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.8■■■□□ 2.52
Igkv5-43A0A0B4J1J2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Igkv5-43A0A0B4J1J2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Igkv5-43A0A0B4J1J2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Igkv5-43A0A0B4J1J2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Igkv5-43A0A0B4J1J2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Igkv5-43A0A0B4J1J2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Igkv5-43A0A0B4J1J2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
Igkv5-43A0A0B4J1J2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.55■■■□□ 2.48
Igkv5-43A0A0B4J1J2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.53■■■□□ 2.48
Igkv5-43A0A0B4J1J2 Gm27325-201ENSMUST00000175467 74 ntBASIC30.52■■■□□ 2.48
Igkv5-43A0A0B4J1J2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Igkv5-43A0A0B4J1J2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Igkv5-43A0A0B4J1J2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.23■■■□□ 2.43
Igkv5-43A0A0B4J1J2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Igkv5-43A0A0B4J1J2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.19■■■□□ 2.42
Igkv5-43A0A0B4J1J2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Igkv5-43A0A0B4J1J2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.1■■■□□ 2.41
Igkv5-43A0A0B4J1J2 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.1■■■□□ 2.41
Igkv5-43A0A0B4J1J2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Igkv5-43A0A0B4J1J2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
Igkv5-43A0A0B4J1J2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.09■■■□□ 2.41
Igkv5-43A0A0B4J1J2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Igkv5-43A0A0B4J1J2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Igkv5-43A0A0B4J1J2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Igkv5-43A0A0B4J1J2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Igkv5-43A0A0B4J1J2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Igkv5-43A0A0B4J1J2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Igkv5-43A0A0B4J1J2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Igkv5-43A0A0B4J1J2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Igkv5-43A0A0B4J1J2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
Igkv5-43A0A0B4J1J2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
Igkv5-43A0A0B4J1J2 Rab21-202ENSMUST00000218831 843 ntBASIC29.81■■■□□ 2.36
Igkv5-43A0A0B4J1J2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Igkv5-43A0A0B4J1J2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.73■■■□□ 2.35
Igkv5-43A0A0B4J1J2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.69■■■□□ 2.34
Igkv5-43A0A0B4J1J2 Gm25262-201ENSMUST00000174934 133 ntBASIC29.68■■■□□ 2.34
Igkv5-43A0A0B4J1J2 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.68■■■□□ 2.34
Igkv5-43A0A0B4J1J2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Igkv5-43A0A0B4J1J2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.67■■■□□ 2.34
Igkv5-43A0A0B4J1J2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Igkv5-43A0A0B4J1J2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
Igkv5-43A0A0B4J1J2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Igkv5-43A0A0B4J1J2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Igkv5-43A0A0B4J1J2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.45■■■□□ 2.31
Igkv5-43A0A0B4J1J2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Igkv5-43A0A0B4J1J2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Igkv5-43A0A0B4J1J2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.4■■■□□ 2.3
Igkv5-43A0A0B4J1J2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
Igkv5-43A0A0B4J1J2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Igkv5-43A0A0B4J1J2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Igkv5-43A0A0B4J1J2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.22■■■□□ 2.27
Igkv5-43A0A0B4J1J2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Igkv5-43A0A0B4J1J2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
Igkv5-43A0A0B4J1J2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Igkv5-43A0A0B4J1J2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
Igkv5-43A0A0B4J1J2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Igkv5-43A0A0B4J1J2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Igkv5-43A0A0B4J1J2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms