Protein–RNA interactions for Protein: A0A140T8P2

Igkv6-20, Immunoglobulin kappa variable 6-20 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-20A0A140T8P2 Gm25239-201ENSMUST00000174915 86 ntBASIC37,46■■■■□ 3,59
Igkv6-20A0A140T8P2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34,58■■■■□ 3,13
Igkv6-20A0A140T8P2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34,13■■■■□ 3,05
Igkv6-20A0A140T8P2 Gm15042-201ENSMUST00000120212 883 ntBASIC32,86■■■□□ 2,85
Igkv6-20A0A140T8P2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32,63■■■□□ 2,81
Igkv6-20A0A140T8P2 Gm24109-201ENSMUST00000175489 103 ntBASIC32,43■■■□□ 2,78
Igkv6-20A0A140T8P2 Gm15045-201ENSMUST00000117359 883 ntBASIC32,18■■■□□ 2,74
Igkv6-20A0A140T8P2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32,06■■■□□ 2,72
Igkv6-20A0A140T8P2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31,81■■■□□ 2,68
Igkv6-20A0A140T8P2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31,64■■■□□ 2,66
Igkv6-20A0A140T8P2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31,63■■■□□ 2,65
Igkv6-20A0A140T8P2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31,39■■■□□ 2,62
Igkv6-20A0A140T8P2 Gm23366-201ENSMUST00000175022 89 ntBASIC31,31■■■□□ 2,6
Igkv6-20A0A140T8P2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31,15■■■□□ 2,58
Igkv6-20A0A140T8P2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30,83■■■□□ 2,53
Igkv6-20A0A140T8P2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30,68■■■□□ 2,5
Igkv6-20A0A140T8P2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30,61■■■□□ 2,49
Igkv6-20A0A140T8P2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30,45■■■□□ 2,47
Igkv6-20A0A140T8P2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30,34■■■□□ 2,45
Igkv6-20A0A140T8P2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30,33■■■□□ 2,45
Igkv6-20A0A140T8P2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30,22■■■□□ 2,43
Igkv6-20A0A140T8P2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30,15■■■□□ 2,42
Igkv6-20A0A140T8P2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30,11■■■□□ 2,41
Igkv6-20A0A140T8P2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30,1■■■□□ 2,41
Igkv6-20A0A140T8P2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30,08■■■□□ 2,41
Igkv6-20A0A140T8P2 Psd-208ENSMUST00000224556 2034 ntBASIC30,07■■■□□ 2,4
Igkv6-20A0A140T8P2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30,06■■■□□ 2,4
Igkv6-20A0A140T8P2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29,99■■■□□ 2,39
Igkv6-20A0A140T8P2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29,99■■■□□ 2,39
Igkv6-20A0A140T8P2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29,81■■■□□ 2,36
Igkv6-20A0A140T8P2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29,78■■■□□ 2,36
Igkv6-20A0A140T8P2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29,68■■■□□ 2,34
Igkv6-20A0A140T8P2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29,68■■■□□ 2,34
Igkv6-20A0A140T8P2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29,66■■■□□ 2,34
Igkv6-20A0A140T8P2 Gm25238-201ENSMUST00000174914 89 ntBASIC29,54■■■□□ 2,32
Igkv6-20A0A140T8P2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29,51■■■□□ 2,31
Igkv6-20A0A140T8P2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29,45■■■□□ 2,31
Igkv6-20A0A140T8P2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29,31■■■□□ 2,28
Igkv6-20A0A140T8P2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29,27■■■□□ 2,28
Igkv6-20A0A140T8P2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29,19■■■□□ 2,26
Igkv6-20A0A140T8P2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29,17■■■□□ 2,26
Igkv6-20A0A140T8P2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29,03■■■□□ 2,24
Igkv6-20A0A140T8P2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29,02■■■□□ 2,24
Igkv6-20A0A140T8P2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28,94■■■□□ 2,22
Igkv6-20A0A140T8P2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28,93■■■□□ 2,22
Igkv6-20A0A140T8P2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28,91■■■□□ 2,22
Igkv6-20A0A140T8P2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28,86■■■□□ 2,21
Igkv6-20A0A140T8P2 Gm27325-201ENSMUST00000175467 74 ntBASIC28,84■■■□□ 2,21
Igkv6-20A0A140T8P2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28,75■■■□□ 2,19
Igkv6-20A0A140T8P2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28,71■■■□□ 2,19
Igkv6-20A0A140T8P2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28,71■■■□□ 2,19
Igkv6-20A0A140T8P2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28,65■■■□□ 2,18
Igkv6-20A0A140T8P2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28,64■■■□□ 2,18
Igkv6-20A0A140T8P2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28,62■■■□□ 2,17
Igkv6-20A0A140T8P2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28,54■■■□□ 2,16
Igkv6-20A0A140T8P2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28,47■■■□□ 2,15
Igkv6-20A0A140T8P2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28,45■■■□□ 2,14
Igkv6-20A0A140T8P2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28,4■■■□□ 2,14
Igkv6-20A0A140T8P2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28,4■■■□□ 2,14
Igkv6-20A0A140T8P2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28,35■■■□□ 2,13
Igkv6-20A0A140T8P2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28,3■■■□□ 2,12
Igkv6-20A0A140T8P2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28,25■■■□□ 2,11
Igkv6-20A0A140T8P2 Rab21-202ENSMUST00000218831 843 ntBASIC28,24■■■□□ 2,11
Igkv6-20A0A140T8P2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28,23■■■□□ 2,11
Igkv6-20A0A140T8P2 Gm25262-201ENSMUST00000174934 133 ntBASIC28,23■■■□□ 2,11
Igkv6-20A0A140T8P2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28,21■■■□□ 2,11
Igkv6-20A0A140T8P2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28,16■■■□□ 2,1
Igkv6-20A0A140T8P2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28,16■■■□□ 2,1
Igkv6-20A0A140T8P2 Gm10524-201ENSMUST00000181931 1893 ntBASIC28,15■■■□□ 2,1
Igkv6-20A0A140T8P2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28,13■■■□□ 2,09
Igkv6-20A0A140T8P2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28,13■■■□□ 2,09
Igkv6-20A0A140T8P2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28,06■■■□□ 2,08
Igkv6-20A0A140T8P2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28,05■■■□□ 2,08
Igkv6-20A0A140T8P2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28,04■■■□□ 2,08
Igkv6-20A0A140T8P2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28,01■■■□□ 2,07
Igkv6-20A0A140T8P2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2,07
Igkv6-20A0A140T8P2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27,97■■■□□ 2,07
Igkv6-20A0A140T8P2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27,96■■■□□ 2,07
Igkv6-20A0A140T8P2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27,94■■■□□ 2,06
Igkv6-20A0A140T8P2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27,83■■■□□ 2,05
Igkv6-20A0A140T8P2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27,83■■■□□ 2,05
Igkv6-20A0A140T8P2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27,82■■■□□ 2,04
Igkv6-20A0A140T8P2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27,8■■■□□ 2,04
Igkv6-20A0A140T8P2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27,8■■■□□ 2,04
Igkv6-20A0A140T8P2 Gm42596-201ENSMUST00000196305 1958 ntBASIC27,79■■■□□ 2,04
Igkv6-20A0A140T8P2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27,75■■■□□ 2,03
Igkv6-20A0A140T8P2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27,72■■■□□ 2,03
Igkv6-20A0A140T8P2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27,72■■■□□ 2,03
Igkv6-20A0A140T8P2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27,68■■■□□ 2,02
Igkv6-20A0A140T8P2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27,68■■■□□ 2,02
Igkv6-20A0A140T8P2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27,64■■■□□ 2,02
Igkv6-20A0A140T8P2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27,64■■■□□ 2,02
Igkv6-20A0A140T8P2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27,62■■■□□ 2,01
Igkv6-20A0A140T8P2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27,61■■■□□ 2,01
Igkv6-20A0A140T8P2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27,59■■■□□ 2,01
Igkv6-20A0A140T8P2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27,56■■■□□ 2
Igkv6-20A0A140T8P2 Gm26115-201ENSMUST00000175605 87 ntBASIC27,47■■□□□ 1,99
Igkv6-20A0A140T8P2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27,47■■□□□ 1,99
Igkv6-20A0A140T8P2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27,46■■□□□ 1,99
Igkv6-20A0A140T8P2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27,45■■□□□ 1,98
Retrieved 100 of 76,532 protein–RNA pairs in 27,8 ms