Protein–RNA interactions for Protein: Q3UHU5

Mtcl1, Microtubule cross-linking factor 1, mousemouse

Predictions only

Length 1,945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtcl1Q3UHU5 Gm25239-201ENSMUST00000174915 86 ntBASIC48.68■■■■■ 5.38
Mtcl1Q3UHU5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC45.46■■■■■ 4.87
Mtcl1Q3UHU5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC44.28■■■■■ 4.68
Mtcl1Q3UHU5 Gm24109-201ENSMUST00000175489 103 ntBASIC42.6■■■■■ 4.41
Mtcl1Q3UHU5 Gm15042-201ENSMUST00000120212 883 ntBASIC42.05■■■■■ 4.32
Mtcl1Q3UHU5 Gm15045-201ENSMUST00000117359 883 ntBASIC41.38■■■■■ 4.21
Mtcl1Q3UHU5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC41.2■■■■■ 4.19
Mtcl1Q3UHU5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC41.04■■■■■ 4.16
Mtcl1Q3UHU5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC40.98■■■■■ 4.15
Mtcl1Q3UHU5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC40.85■■■■■ 4.13
Mtcl1Q3UHU5 Gm23366-201ENSMUST00000175022 89 ntBASIC40.44■■■■■ 4.06
Mtcl1Q3UHU5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC39.87■■■■□ 3.97
Mtcl1Q3UHU5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
Mtcl1Q3UHU5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC39.38■■■■□ 3.9
Mtcl1Q3UHU5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC39.25■■■■□ 3.87
Mtcl1Q3UHU5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC39.15■■■■□ 3.86
Mtcl1Q3UHU5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
Mtcl1Q3UHU5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
Mtcl1Q3UHU5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
Mtcl1Q3UHU5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
Mtcl1Q3UHU5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC38.64■■■■□ 3.78
Mtcl1Q3UHU5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
Mtcl1Q3UHU5 Gm25238-201ENSMUST00000174914 89 ntBASIC38.58■■■■□ 3.77
Mtcl1Q3UHU5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC38.52■■■■□ 3.76
Mtcl1Q3UHU5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38.18■■■■□ 3.7
Mtcl1Q3UHU5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC38.03■■■■□ 3.68
Mtcl1Q3UHU5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
Mtcl1Q3UHU5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37.96■■■■□ 3.67
Mtcl1Q3UHU5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
Mtcl1Q3UHU5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37.75■■■■□ 3.63
Mtcl1Q3UHU5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC37.73■■■■□ 3.63
Mtcl1Q3UHU5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC37.71■■■■□ 3.63
Mtcl1Q3UHU5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
Mtcl1Q3UHU5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37.52■■■■□ 3.6
Mtcl1Q3UHU5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.37■■■■□ 3.57
Mtcl1Q3UHU5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC37.27■■■■□ 3.56
Mtcl1Q3UHU5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC37.26■■■■□ 3.55
Mtcl1Q3UHU5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC37.13■■■■□ 3.53
Mtcl1Q3UHU5 Gm25262-201ENSMUST00000174934 133 ntBASIC36.92■■■■□ 3.5
Mtcl1Q3UHU5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
Mtcl1Q3UHU5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC36.81■■■■□ 3.48
Mtcl1Q3UHU5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
Mtcl1Q3UHU5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
Mtcl1Q3UHU5 Gm27325-201ENSMUST00000175467 74 ntBASIC36.77■■■■□ 3.48
Mtcl1Q3UHU5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36.73■■■■□ 3.47
Mtcl1Q3UHU5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC36.69■■■■□ 3.46
Mtcl1Q3UHU5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC36.55■■■■□ 3.44
Mtcl1Q3UHU5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.44
Mtcl1Q3UHU5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC36.47■■■■□ 3.43
Mtcl1Q3UHU5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC36.44■■■■□ 3.42
Mtcl1Q3UHU5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36.41■■■■□ 3.42
Mtcl1Q3UHU5 Gm8109-201ENSMUST00000194076 746 ntBASIC36.35■■■■□ 3.41
Mtcl1Q3UHU5 Gm26115-201ENSMUST00000175605 87 ntBASIC36.34■■■■□ 3.41
Mtcl1Q3UHU5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC36.32■■■■□ 3.4
Mtcl1Q3UHU5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC36.3■■■■□ 3.4
Mtcl1Q3UHU5 Rab21-202ENSMUST00000218831 843 ntBASIC36.3■■■■□ 3.4
Mtcl1Q3UHU5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC36.21■■■■□ 3.39
Mtcl1Q3UHU5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC36.1■■■■□ 3.37
Mtcl1Q3UHU5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC36.04■■■■□ 3.36
Mtcl1Q3UHU5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
Mtcl1Q3UHU5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
Mtcl1Q3UHU5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC36■■■■□ 3.35
Mtcl1Q3UHU5 Psd-208ENSMUST00000224556 2034 ntBASIC35.95■■■■□ 3.35
Mtcl1Q3UHU5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
Mtcl1Q3UHU5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Mtcl1Q3UHU5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35.79■■■■□ 3.32
Mtcl1Q3UHU5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC35.77■■■■□ 3.32
Mtcl1Q3UHU5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC35.74■■■■□ 3.31
Mtcl1Q3UHU5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC35.73■■■■□ 3.31
Mtcl1Q3UHU5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35.68■■■■□ 3.3
Mtcl1Q3UHU5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35.54■■■■□ 3.28
Mtcl1Q3UHU5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC35.54■■■■□ 3.28
Mtcl1Q3UHU5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Mtcl1Q3UHU5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35.48■■■■□ 3.27
Mtcl1Q3UHU5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC35.41■■■■□ 3.26
Mtcl1Q3UHU5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC35.38■■■■□ 3.25
Mtcl1Q3UHU5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
Mtcl1Q3UHU5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.36■■■■□ 3.25
Mtcl1Q3UHU5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Mtcl1Q3UHU5 Gm17082-201ENSMUST00000166043 1091 ntBASIC35.27■■■■□ 3.24
Mtcl1Q3UHU5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC35.25■■■■□ 3.23
Mtcl1Q3UHU5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
Mtcl1Q3UHU5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
Mtcl1Q3UHU5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
Mtcl1Q3UHU5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC35.09■■■■□ 3.21
Mtcl1Q3UHU5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Mtcl1Q3UHU5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34.99■■■■□ 3.19
Mtcl1Q3UHU5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC34.98■■■■□ 3.19
Mtcl1Q3UHU5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC34.98■■■■□ 3.19
Mtcl1Q3UHU5 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC34.97■■■■□ 3.19
Mtcl1Q3UHU5 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC34.94■■■■□ 3.18
Mtcl1Q3UHU5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Mtcl1Q3UHU5 Gm24804-201ENSMUST00000174982 85 ntBASIC34.87■■■■□ 3.17
Mtcl1Q3UHU5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Mtcl1Q3UHU5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC34.8■■■■□ 3.16
Mtcl1Q3UHU5 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC34.8■■■■□ 3.16
Mtcl1Q3UHU5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
Mtcl1Q3UHU5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
Mtcl1Q3UHU5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC34.76■■■■□ 3.16
Mtcl1Q3UHU5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34.73■■■■□ 3.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms