RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Tagln2Q9WVA4 199 aaKnown RBP13.29□□□□□ -0.28
Vti1b-201ENSMUST00000055262 Ighv1-5A0A0A6YWG2 117 aa13.29□□□□□ -0.28
Vti1b-201ENSMUST00000055262 Gm10251J3QPM5 127 aa13.29□□□□□ -0.28
Vti1b-201ENSMUST00000055262 Sub1P11031 127 aaKnown RBP13.29□□□□□ -0.28
Vti1b-201ENSMUST00000055262 Smim9Q3V0X1 137 aa13.29□□□□□ -0.28
Vti1b-201ENSMUST00000055262 Rhox4eQ504P9 205 aa13.29□□□□□ -0.28
Vti1b-201ENSMUST00000055262 Q99M08 65 aa13.29□□□□□ -0.28
Vti1b-201ENSMUST00000055262 Kmt2aP55200 3966 aa13.28□□□□□ -0.28
Vti1b-201ENSMUST00000055262 Trav13d-1A0A075B606 110 aa13.28□□□□□ -0.28
Vti1b-201ENSMUST00000055262 P01738 130 aa13.28□□□□□ -0.28
Vti1b-201ENSMUST00000055262 P06328 117 aa13.28□□□□□ -0.28
Vti1b-201ENSMUST00000055262 Npc2Q9Z0J0 149 aa13.28□□□□□ -0.28
Vti1b-201ENSMUST00000055262 SnapinQ9Z266 136 aa13.28□□□□□ -0.28
Vti1b-201ENSMUST00000055262 D730001G18RikA0A087WQU7 115 aa13.27□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Trbv14A0A140T8L9 115 aa13.27□□□□□ -0.29
Vti1b-201ENSMUST00000055262 RhebQ921J2 184 aa13.27□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Mrpl18Q9CQL5 180 aa13.27□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Tmem263Q9DAM7 115 aa13.27□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Atp5iQ06185 71 aaKnown RBP13.26□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Ndufa4l2Q4FZG9 87 aa13.26□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Cotl1Q9CQI6 142 aa13.26□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Mrpl20Q9CQL4 149 aa13.26□□□□□ -0.29
Vti1b-201ENSMUST00000055262 8030423J24RikQ9CX45 142 aa13.26□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Ube2l6Q9QZU9 153 aa13.26□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Gm21874J3QNZ6 232 aa13.25□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Ctdsp1P58466 261 aa13.25□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Tex26Q0VB26 296 aa13.25□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Trav7-2Q5R1I3 112 aa13.25□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Tmed6Q9CQG0 239 aa13.25□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Gm17509Q9CZ61 145 aa13.25□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Trbv13-1A0A0B4J1P8 112 aa13.24□□□□□ -0.29
Vti1b-201ENSMUST00000055262 P01745 121 aa13.24□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Trim63Q38HM4 350 aa13.24□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Gtsf1lQ9CWD0 151 aa13.24□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Trav7-4A0A075B6C1 113 aa13.23□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Olfr1118A0A0J9YUE7 307 aa13.23□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Twist1P26687 206 aa13.23□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Timm8bP62077 83 aaKnown RBP13.23□□□□□ -0.29
Vti1b-201ENSMUST00000055262 AsipQ03288 131 aa13.23□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Trav7d-4Q5R1H9 113 aa13.23□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Klk15Q8CGR4 254 aa13.23□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Trav14n-3A0A075B645 120 aa13.23□□□□□ -0.29
Vti1b-201ENSMUST00000055262 MdfiP70331 251 aa13.23□□□□□ -0.29
Vti1b-201ENSMUST00000055262 PrkdcP97313 4128 aa13.23□□□□□ -0.29
Vti1b-201ENSMUST00000055262 RfxapQ8VCG9 231 aa13.23□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Leap2Q91V13 76 aa13.23□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Gm9508A0A1W2P7W0 230 aa13.22□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Olfr1419Q7TQS2 343 aa13.22□□□□□ -0.29
Vti1b-201ENSMUST00000055262 Nkx6-2D3Z4R4 277 aa13.21□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Gm10490F6VBM2 120 aa13.21□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Immp2lQ8BPT6 175 aa13.21□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Chchd7Q8K2Q5 85 aa13.21□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Nop10Q9CQS2 64 aa13.21□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Trav9n-2A0A0G2JDP3 113 aa13.2□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Olfr1191-ps1A0A1L1STD5 311 aa13.2□□□□□ -0.3
Vti1b-201ENSMUST00000055262 H2al2bA9Z055 111 aa13.2□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Olfr1537P34983 314 aa13.2□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Tmem241Q3UME2 297 aa13.2□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Trav7d-3Q5R1I1 112 aa13.2□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Foxc1Q61572 553 aa13.2□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Trav7n-4A0A075B620 113 aa13.19□□□□□ -0.3
Vti1b-201ENSMUST00000055262 PigyP0C1P0 71 aa13.19□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Igfbp1P47876 272 aa13.19□□□□□ -0.3
Vti1b-201ENSMUST00000055262 7420426K07RikQ3UX66 186 aa13.19□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Gm10334Q792Y8 246 aa13.19□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Spag11Q8K4N2 71 aa13.19□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Olfr1431Q8VF59 312 aa13.19□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Mrpl36Q99N90 102 aa13.19□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Zmat5Q9CQR5 170 aa13.19□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Ms4a12A0A087WSB9 263 aa13.18□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Gm20499D3Z4G5 72 aa13.17□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Gm10203F6QJ09 66 aa13.17□□□□□ -0.3
Vti1b-201ENSMUST00000055262 S100a4P07091 101 aa13.17□□□□□ -0.3
Vti1b-201ENSMUST00000055262 CtsgP28293 261 aa13.17□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Cacng7P62956 275 aa13.17□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Khdc1aQ3UWR2 166 aa13.17□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Cphx2Q8BX39 182 aa13.17□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Ighv6-7A0A0A6YWU3 119 aa13.16□□□□□ -0.3
Vti1b-201ENSMUST00000055262 C1qcQ02105 246 aa13.16□□□□□ -0.3
Vti1b-201ENSMUST00000055262 NpbQ8K4P1 119 aa13.16□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Gm14214V9GX35 225 aa13.16□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Igkv4-74A0A0B4J1I3 119 aa13.16□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Rhox4gQ2MDF7 205 aa13.16□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Smim15Q3UTD9 74 aa13.16□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Olfr322Q5NCC8 327 aa13.16□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Gm17359A0A0G2JEB7 487 aa13.15□□□□□ -0.3
Vti1b-201ENSMUST00000055262 B230217C12RikE9Q3Z1 139 aa13.15□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Bloc1s1O55102 125 aa13.15□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Kcnip4Q6PHZ8 250 aa13.15□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Pttg1Q9CQJ7 199 aa13.15□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Klf13Q9JJZ6 289 aa13.15□□□□□ -0.3
Vti1b-201ENSMUST00000055262 Trbv16A0A0B4J1H3 115 aa13.14□□□□□ -0.31
Vti1b-201ENSMUST00000055262 Scgb1b29D2XZ31 93 aa13.14□□□□□ -0.31
Vti1b-201ENSMUST00000055262 Scgb1b20E9PWZ2 93 aa13.14□□□□□ -0.31
Vti1b-201ENSMUST00000055262 Foxh1O88621 401 aa13.14□□□□□ -0.31
Vti1b-201ENSMUST00000055262 Csn3P06796 181 aa13.14□□□□□ -0.31
Vti1b-201ENSMUST00000055262 SnrpcQ62241 159 aa13.14□□□□□ -0.31
Vti1b-201ENSMUST00000055262 CnfnQ6PCW6 111 aa13.14□□□□□ -0.31
Vti1b-201ENSMUST00000055262 Psmg3Q9CZH3 122 aa13.14□□□□□ -0.31
Vti1b-201ENSMUST00000055262 Ins1P01325 108 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms