RNA–Protein interactions for RNA: ENSMUST00000028767.8

Rtf1-201, Transcript of RNA polymerase-associated protein RTF1 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rtf1, Length 4,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtf1-201ENSMUST00000028767 Gm21994F6T2D2 329 aa11.38□□□□□ -0.59
Rtf1-201ENSMUST00000028767 P01794 123 aa11.38□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Vmn1r197Q8R265 298 aa11.38□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Prss29Q99MS4 279 aa11.38□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Sec11aQ9R0P6 179 aa11.37□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Gm7849D3YX03 116 aa11.37□□□□□ -0.59
Rtf1-201ENSMUST00000028767 PmvkQ9D1G2 192 aa11.37□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Ighv3-1A0A075B5S6 116 aa11.36□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Gm17359A0A0G2JEB7 487 aa11.36□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Trav7-2Q5R1I3 112 aa11.36□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Ifitm10Q8BR26 201 aa11.36□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Tomm6Q9CQN3 74 aa11.36□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Igkv4-57-1A0A075B5M4 119 aa11.36□□□□□ -0.59
Rtf1-201ENSMUST00000028767 P01756 117 aa11.36□□□□□ -0.59
Rtf1-201ENSMUST00000028767 P01757 117 aa11.36□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Pip4p1Q3TWL2 284 aa11.36□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Gm35549A0A0N4SUS7 141 aa11.36□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Sumo2P61957 95 aaKnown RBP11.36□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Mapk1ip1lQ8BH93 242 aa11.36□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Gnb1lQ9EQ15 326 aa11.36□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Gm20517G3UVU6 152 aa11.36□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Lgals6O54891 301 aa11.36□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Defb26Q30KN7 186 aa11.36□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Dscaml1Q4VA61 2053 aa11.36□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Gpr82Q8BZR0 328 aa11.35□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Lyrm7Q9DA03 104 aa11.35□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Pla2g2eQ9QUL3 142 aa11.35□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Ighv1-23A0A0A6YVW3 117 aa11.35□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Mcrip2Q9CQB2 160 aaKnown RBP11.35□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Trav6-6A0A075B603 114 aa11.34□□□□□ -0.59
Rtf1-201ENSMUST00000028767 P01739 132 aa11.34□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Trdv5A0A075B661 115 aa11.34□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Foxi1Q922I5 372 aa11.34□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Q9CX25 107 aa11.34□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Trav6n-6A0A075B6B2 114 aa11.34□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Sdhaf1Q3U276 118 aa11.34□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Rab37Q9JKM7 223 aa11.34□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Pla2g2cP48076 150 aa11.33□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Tmem88bQ3TYP4 173 aa11.33□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Samd10Q7TST3 202 aa11.33□□□□□ -0.59
Rtf1-201ENSMUST00000028767 Brd3osA0A1B0GRB6 84 aa11.33□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Gm9513B3GLJ6 99 aa11.33□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Mrps12O35680 139 aa11.33□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Q9D131 166 aa11.33□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Olfr498Q8VEW2 330 aa11.32□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Ighv1-64A0A075B5X3 117 aa11.32□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Edn2P22389 175 aa11.32□□□□□ -0.6
Rtf1-201ENSMUST00000028767 NrepQ07475 68 aa11.32□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Olfr312Q7TRZ9 308 aa11.32□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Ighv1-16A0A075B5U1 98 aa11.32□□□□□ -0.6
Rtf1-201ENSMUST00000028767 P01750 117 aa11.32□□□□□ -0.6
Rtf1-201ENSMUST00000028767 SbpP15501 199 aa11.32□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Cphx2Q8BX39 182 aa11.32□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Higd1aQ9JLR9 95 aa11.32□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Ndufa4Q62425 82 aaKnown RBP11.31□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Gm94Q3V2D2 93 aa11.31□□□□□ -0.6
Rtf1-201ENSMUST00000028767 VcanQ62059 3357 aa11.31□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Trbv13-1A0A0B4J1P8 112 aa11.31□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Gata4Q08369 441 aa11.31□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Cdpf1Q8R3A2 119 aa11.31□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Ube2e2Q91W82 201 aa11.31□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Znf239P24399 201 aa11.3□□□□□ -0.6
Rtf1-201ENSMUST00000028767 BptfA2A654 3036 aaKnown RBP11.3□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Odf3l1Q810P2 275 aa11.3□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Ndufc2Q9CQ54 120 aa11.3□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Tex48Q9DA81 110 aa11.3□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Phlda3Q9WV95 125 aa11.3□□□□□ -0.6
Rtf1-201ENSMUST00000028767 PolP10400 120 aa11.3□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Gm1553Q66VB7 94 aa11.3□□□□□ -0.6
Rtf1-201ENSMUST00000028767 PerpQ9JK95 193 aa11.3□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Map1aQ9QYR6 2776 aa11.3□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Prrc2cQ3TLH4 2846 aaKnown RBP11.3□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Tcl1b4P56844 120 aa11.3□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Chac1Q8R3J5 223 aa11.3□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Pla2g2dQ9WVF6 144 aa11.3□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Wdfy4E9Q2M9 3149 aa11.29□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Esp24A8R0V6 68 aa11.29□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Ss18Q62280 418 aa11.29□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Plac1Q9JI83 173 aa11.29□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Clec4b2Q67DU8 208 aa11.29□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Klhdc1Q80YG3 406 aa11.29□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Ighv1-50A0A075B5W1 117 aa11.29□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Fam241bQ9D882 120 aa11.29□□□□□ -0.6
Rtf1-201ENSMUST00000028767 TtrP07309 147 aa11.28□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Znf575Q3TXZ1 239 aa11.28□□□□□ -0.6
Rtf1-201ENSMUST00000028767 TrrapQ80YV3 2565 aaKnown RBP11.28□□□□□ -0.6
Rtf1-201ENSMUST00000028767 DmdP11531 3678 aa11.28□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Dppa2Q9CWH0 301 aa11.28□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Trbv14A0A140T8L9 115 aa11.28□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Gm45521A0A1B0GRK0 198 aa11.28□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Bak1O08734 209 aa11.27□□□□□ -0.6
Rtf1-201ENSMUST00000028767 CrygbP04344 175 aa11.27□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Spink1P09036 80 aa11.27□□□□□ -0.6
Rtf1-201ENSMUST00000028767 UrahQ9CRB3 118 aa11.27□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Itpr1P11881 2749 aa11.27□□□□□ -0.6
Rtf1-201ENSMUST00000028767 Obox8V9GWY9 217 aa11.27□□□□□ -0.61
Rtf1-201ENSMUST00000028767 P01820 115 aa11.27□□□□□ -0.61
Rtf1-201ENSMUST00000028767 Defb18Q30KP5 85 aa11.27□□□□□ -0.61
Rtf1-201ENSMUST00000028767 4930544G11RikQ9CR99 193 aa11.27□□□□□ -0.61
Rtf1-201ENSMUST00000028767 Trav9-2A0A075B647 113 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms