RNA–Protein interactions for RNA: ENSMUST00000193901.5

Pcdh9-204, Transcript of Protocadherin 9, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pcdh9, Length 6,127 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-204ENSMUST00000193901 Ighv1-69A0A0G2JFS5 117 aa6.12□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 P01658 132 aa6.12□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Igf1P05017 153 aa6.12□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Serp2Q6TAW2 65 aa6.12□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Numa1E9Q7G0 2094 aaKnown RBP6.12□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Ighv1-64A0A075B5X3 117 aa6.12□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Ighv1-36A0A0A6YXT2 117 aa6.12□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Igkv6-32A0A140T8N9 115 aa6.12□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Gm12689Q8BQU9 117 aa6.12□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 4930470P17RikQ9D542 155 aa6.12□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Tnfrsf23Q9ER63 176 aa6.12□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Heatr5bQ8C547 2070 aa6.12□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Tfpi2O35536 230 aa6.12□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Prdm6Q3UZD5 596 aa6.12□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Clec4b2Q67DU8 208 aa6.12□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Lypd8Q9D7S0 255 aa6.12□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Them7Q9DCP4 223 aa6.12□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 ArtnQ9Z0L2 224 aa6.12□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 CenpwQ3URR0 86 aa6.12□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Minos1Q7TNS2 76 aa6.12□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Ighv1-19A0A0A6YWX0 117 aa6.11□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Csrp1P97315 193 aaKnown RBP6.11□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Igkv10-95A0A0G2JFY3 115 aa6.11□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Gm17521F6QAC8 156 aa6.11□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Smrp1Q2MH31 260 aa6.11□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Defb47Q30KN1 79 aa6.11□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 1700010B08RikQ9DAI7 102 aa6.11□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Arfgef1G3X9K3 1846 aaKnown RBP6.11□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Gm10306Q9CUK2 115 aa6.11□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Trav12-3A0A075B648 115 aa6.11□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Gm17577J3QNF7 156 aa6.11□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Asphd1Q2TA57 360 aa6.11□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Ang2Q64438 145 aa6.11□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 RtbdnQ8QZY4 247 aa6.11□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Snrnp200Q6P4T2 2136 aaKnown RBP6.11□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Trav9n-4A0A075B631 113 aa6.11□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 CrygcQ61597 174 aa6.11□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Tmem190Q9D2E9 166 aa6.11□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Gm17455G3UW87 128 aa6.1□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Reg3gO09049 174 aa6.1□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Wipf1Q8K1I7 493 aa6.1□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Prss22Q9ER10 306 aa6.1□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Ighv8-2A0A0A6YW58 119 aa6.1□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Gm21976J3QNN2 249 aa6.1□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Igkv2-137A0A0B4J1H6 120 aa6.1□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 ColqO35348 457 aa6.1□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Rspo4Q8BJ73 228 aa6.1□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Gm26558Q8BLW8 286 aa6.1□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Dmrtc1c1Q9D410 238 aa6.1□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Iglv1A0A075B663 117 aa6.1□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Sipa1l3G3X9J0 1776 aa6.1□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Ighv8-4A0A0A6YW26 117 aa6.09□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Trbv14A0A140T8L9 115 aa6.09□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Igkv3-12A0A140T8P0 119 aa6.09□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Gm20538F6Z9R1 75 aa6.09□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Wfdc2Q9DAU7 174 aa6.09□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Klk12B2RVZ0 247 aa6.09□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Foxf2O54743 446 aa6.09□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 P01794 123 aa6.09□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 P06320 134 aa6.09□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Psmb8P28063 276 aa6.09□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Tcl1b3P56842 122 aa6.09□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Gm12253Q5NC48 229 aa6.09□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Rnf185Q91YT2 192 aa6.09□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Q99M08 65 aa6.09□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Gm9887F6RFI0 207 aa6.09□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 IappP12968 93 aa6.09□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Cox6a1P43024 111 aa6.09□□□□□ -1.43
Pcdh9-204ENSMUST00000193901 Tm2d1Q99MB3 208 aa6.09□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Ccl21aP84444 133 aa6.08□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Ccl21bP86792 133 aa6.08□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Ccl21cP86793 133 aa6.08□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 P01745 121 aa6.08□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 A930003A15RikQ3U552 87 aa6.08□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Shisa3Q3UPR0 238 aa6.08□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Lmo1Q924W9 156 aa6.08□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Nop10Q9CQS2 64 aa6.08□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Igkv1-88A0A140T8N1 120 aa6.08□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Fancd2osQ9D4K4 178 aa6.08□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Scn8aQ9WTU3 1978 aa6.08□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Igf2rQ07113 2483 aaKnown RBP6.08□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Gm20730A0A075B5J6 119 aa6.08□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Igkv2-109A0A075B5K6 120 aa6.08□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Ighv1-55A0A075B5W6 117 aa6.08□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 A0A1Y7VLU2 103 aa6.08□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Myo10F8VQB6 2062 aa6.08□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Ighv3-4A0A0A6YXF1 117 aa6.07□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 P01655 112 aa6.07□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Ube2d2P62838 147 aa6.07□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Q80X32 188 aaKnown RBP6.07□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Scn3aA2ASI5 1947 aa6.07□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Ighv1-50A0A075B5W1 117 aa6.07□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Trav7-6A0A075B640 112 aa6.07□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Ighv6-7A0A0A6YWU3 119 aa6.07□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Cox7bP56393 80 aa6.07□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Pom121l2Q5SW25 972 aa6.07□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Timm17bQ9Z0V7 172 aa6.07□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Ighv8-8A0A0A6YXQ0 119 aa6.07□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Ighv10-1A0A0B4J1J6 119 aa6.07□□□□□ -1.44
Pcdh9-204ENSMUST00000193901 Edn3P48299 214 aa6.07□□□□□ -1.44
Retrieved 100 of 22,080 RNA–protein pairs in 49.7 ms