RNA–Protein interactions for RNA: ENSMUST00000122063.7

Ift88-201, Transcript of Intraflagellar transport protein 88 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ift88, Length 3,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88-201ENSMUST00000122063 P01801 115 aa8.4□□□□□ -1.07
Ift88-201ENSMUST00000122063 PlaurP35456 327 aa8.4□□□□□ -1.07
Ift88-201ENSMUST00000122063 Vmn1r216Q8R257 298 aa8.4□□□□□ -1.07
Ift88-201ENSMUST00000122063 TrrapQ80YV3 2565 aaKnown RBP8.39□□□□□ -1.07
Ift88-201ENSMUST00000122063 Ighv1-53A0A075B5W3 117 aa8.39□□□□□ -1.07
Ift88-201ENSMUST00000122063 Trav3n-3A0A0G2JEM0 114 aa8.39□□□□□ -1.07
Ift88-201ENSMUST00000122063 Zfp109A0A0U1RPC5 652 aa8.39□□□□□ -1.07
Ift88-201ENSMUST00000122063 MsmbO08540 113 aa8.39□□□□□ -1.07
Ift88-201ENSMUST00000122063 Khdc1cQ4KL78 166 aa8.39□□□□□ -1.07
Ift88-201ENSMUST00000122063 Klk10Q99M20 278 aa8.39□□□□□ -1.07
Ift88-201ENSMUST00000122063 Nat8f4G5E8L3 226 aa8.39□□□□□ -1.07
Ift88-201ENSMUST00000122063 Socs3O35718 225 aa8.39□□□□□ -1.07
Ift88-201ENSMUST00000122063 Fhl1P97447 280 aaKnown RBP8.39□□□□□ -1.07
Ift88-201ENSMUST00000122063 Defb18Q30KP5 85 aa8.39□□□□□ -1.07
Ift88-201ENSMUST00000122063 Map1lc3aQ91VR7 121 aa8.39□□□□□ -1.07
Ift88-201ENSMUST00000122063 TirapQ99JY1 241 aa8.39□□□□□ -1.07
Ift88-201ENSMUST00000122063 3110018I06RikQ9CXS0 120 aa8.39□□□□□ -1.07
Ift88-201ENSMUST00000122063 Dpm3Q9D1Q4 92 aa8.39□□□□□ -1.07
Ift88-201ENSMUST00000122063 Arhgap32Q811P8 2089 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Ighv1-22A0A075B5U7 117 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Scgb1b19F6WYW0 93 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 P01756 117 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 P01757 117 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Ca1P13634 261 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Q3UNZ8 350 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Gm9961Q8BNV2 113 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Tctex1d4Q8CDY7 219 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Fmc1Q9CR13 113 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Gtsf1lQ9CWD0 151 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Dkk2Q9QYZ8 259 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 BC067074F6RXI4 2391 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Vwc2lQ505H4 222 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Obox1Q9D350 204 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Trav6-4A0A075B6B4 115 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Scgb1b11A0A087WQJ0 93 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Ighv1-9A0A0A6YW37 117 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Defa35E9QLQ1 93 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Sprr3O09116 238 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 S100a4P07091 101 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Olfr317Q5NCD6 327 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Foxc2Q61850 494 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Olfr1199Q8VF94 310 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Ube2tQ9CQ37 204 aa8.38□□□□□ -1.07
Ift88-201ENSMUST00000122063 Itgb1bp1O35671 200 aa8.37□□□□□ -1.07
Ift88-201ENSMUST00000122063 Hspe1Q64433 102 aaKnown RBP8.37□□□□□ -1.07
Ift88-201ENSMUST00000122063 Prr3Q811B5 190 aaKnown RBP8.37□□□□□ -1.07
Ift88-201ENSMUST00000122063 Tmem129Q8K304 362 aa8.37□□□□□ -1.07
Ift88-201ENSMUST00000122063 Malsu1Q9CWV0 228 aa8.37□□□□□ -1.07
Ift88-201ENSMUST00000122063 Ndufa4l2Q4FZG9 87 aa8.37□□□□□ -1.07
Ift88-201ENSMUST00000122063 Rnf185Q91YT2 192 aa8.37□□□□□ -1.07
Ift88-201ENSMUST00000122063 Tctex1d2Q9CQ66 144 aa8.37□□□□□ -1.07
Ift88-201ENSMUST00000122063 Wnk1P83741 2377 aa8.37□□□□□ -1.07
Ift88-201ENSMUST00000122063 Ighv8-8A0A0A6YXQ0 119 aa8.36□□□□□ -1.07
Ift88-201ENSMUST00000122063 Tcte2E9PY37 120 aa8.36□□□□□ -1.07
Ift88-201ENSMUST00000122063 Atp5iQ06185 71 aaKnown RBP8.36□□□□□ -1.07
Ift88-201ENSMUST00000122063 Defa22Q8C1N8 93 aa8.36□□□□□ -1.07
Ift88-201ENSMUST00000122063 Gm17359A0A0G2JEB7 487 aa8.36□□□□□ -1.07
Ift88-201ENSMUST00000122063 Mien1Q9CQ86 115 aa8.36□□□□□ -1.07
Ift88-201ENSMUST00000122063 Rabac1Q9Z0S9 185 aa8.36□□□□□ -1.07
Ift88-201ENSMUST00000122063 Trav6-6A0A075B603 114 aa8.35□□□□□ -1.07
Ift88-201ENSMUST00000122063 Ighv1-23A0A0A6YVW3 117 aa8.35□□□□□ -1.07
Ift88-201ENSMUST00000122063 Gm28038F7BCN9 126 aa8.35□□□□□ -1.07
Ift88-201ENSMUST00000122063 Gm10553J3QPF1 123 aa8.35□□□□□ -1.07
Ift88-201ENSMUST00000122063 7420426K07RikQ3UX66 186 aa8.35□□□□□ -1.07
Ift88-201ENSMUST00000122063 Usmg5Q78IK2 58 aa8.35□□□□□ -1.07
Ift88-201ENSMUST00000122063 Olfr1437Q7TQR7 312 aa8.35□□□□□ -1.07
Ift88-201ENSMUST00000122063 Hnrnpa3Q8BG05 379 aaKnown RBP8.35□□□□□ -1.07
Ift88-201ENSMUST00000122063 Ifitm2Q99J93 144 aa8.35□□□□□ -1.07
Ift88-201ENSMUST00000122063 Ankrd17Q99NH0 2603 aaKnown RBP8.35□□□□□ -1.07
Ift88-201ENSMUST00000122063 MtorQ9JLN9 2549 aa8.35□□□□□ -1.07
Ift88-201ENSMUST00000122063 Gm21994F6T2D2 329 aa8.35□□□□□ -1.07
Ift88-201ENSMUST00000122063 Mrpl36Q99N90 102 aa8.35□□□□□ -1.07
Ift88-201ENSMUST00000122063 Gm5878E9PUB3 99 aa8.35□□□□□ -1.07
Ift88-201ENSMUST00000122063 P01739 132 aa8.35□□□□□ -1.07
Ift88-201ENSMUST00000122063 Isg15Q64339 161 aaKnown RBP8.35□□□□□ -1.07
Ift88-201ENSMUST00000122063 Gkn1Q9CR36 201 aa8.35□□□□□ -1.07
Ift88-201ENSMUST00000122063 SNORCQ9CXL7 121 aa8.35□□□□□ -1.07
Ift88-201ENSMUST00000122063 Tax1bp3Q9DBG9 124 aa8.35□□□□□ -1.07
Ift88-201ENSMUST00000122063 Gm765B2RVL9 189 aa8.34□□□□□ -1.07
Ift88-201ENSMUST00000122063 Emp2O88662 172 aa8.34□□□□□ -1.07
Ift88-201ENSMUST00000122063 Samd5Q3V1H9 173 aa8.34□□□□□ -1.07
Ift88-201ENSMUST00000122063 Il22ra1Q80XZ4 581 aa8.34□□□□□ -1.07
Ift88-201ENSMUST00000122063 Rif1Q6PR54 2419 aaKnown RBP8.34□□□□□ -1.07
Ift88-201ENSMUST00000122063 Trav16d-dv11A0A075B617 117 aa8.34□□□□□ -1.07
Ift88-201ENSMUST00000122063 Ighv1-82A0A0G2JEU7 117 aa8.34□□□□□ -1.07
Ift88-201ENSMUST00000122063 Trbv17A0A140T8P8 114 aa8.34□□□□□ -1.07
Ift88-201ENSMUST00000122063 Tmem136Q3TYE7 245 aa8.34□□□□□ -1.07
Ift88-201ENSMUST00000122063 Trav2Q5R1I9 109 aa8.34□□□□□ -1.07
Ift88-201ENSMUST00000122063 Cnn3Q9DAW9 330 aaKnown RBP8.34□□□□□ -1.07
Ift88-201ENSMUST00000122063 Chd9Q8BYH8 2885 aa8.34□□□□□ -1.07
Ift88-201ENSMUST00000122063 Ceacam15A0A0B4J1L0 234 aa8.33□□□□□ -1.08
Ift88-201ENSMUST00000122063 1520401A03RikA0A0J9YVH6 598 aa8.33□□□□□ -1.08
Ift88-201ENSMUST00000122063 Gm20517G3UVU6 152 aa8.33□□□□□ -1.08
Ift88-201ENSMUST00000122063 Odf1Q61999 247 aa8.33□□□□□ -1.08
Ift88-201ENSMUST00000122063 Gm9913Q8BQQ2 135 aa8.33□□□□□ -1.08
Ift88-201ENSMUST00000122063 Tomm6Q9CQN3 74 aa8.33□□□□□ -1.08
Ift88-201ENSMUST00000122063 RhohQ9D3G9 191 aa8.33□□□□□ -1.08
Ift88-201ENSMUST00000122063 FlnaQ8BTM8 2647 aaKnown RBP8.33□□□□□ -1.08
Ift88-201ENSMUST00000122063 Chd6A3KFM7 2711 aa8.33□□□□□ -1.08
Ift88-201ENSMUST00000122063 Trav14-2A0A075B694 121 aa8.33□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 62.5 ms