RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Supt4h1bQ9Z199 117 aa7.52□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ighv1-34A0A075B5V2 117 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Saa3P04918 122 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Edn2P22389 175 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Samd5Q3V1H9 173 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Dmrtc1c1Q9D410 238 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Cnot1Q6ZQ08 2375 aaKnown RBP7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Synj2bpQ9D6K5 145 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 A0A1L1SR50 188 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Tmem92B7ZWI3 162 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Cdkn2aQ64364 169 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Gatd1Q8BFQ8 220 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ighv1-18A0A0A6YXN4 117 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Gm20458E9PXJ7 78 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Gm10203F6QJ09 66 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Trav7-2Q5R1I3 112 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Vmo1Q5SXG7 201 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Tcf20Q9EPQ8 1987 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ighv1-7A0A075B5T7 117 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Q3UNZ8 350 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 H2al1nQ497L1 109 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Gm17334Q8C6U3 126 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ankrd39Q9D2X0 183 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 GlmpQ9JHJ3 404 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Lsm4Q9QXA5 137 aaKnown RBP7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ly6g6dQ9Z1Q3 135 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ear14F6YUX7 155 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Folr2Q05685 251 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ntf4Q80VU4 209 aa7.51□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ighv8-4A0A0A6YW26 117 aa7.5□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Shisa9Q9CZN4 424 aa7.5□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Spink12Q9D256 87 aa7.5□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ighv13-2A0A0A6YWN3 119 aa7.5□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Igkv8-16A0A0G2JDG9 121 aa7.5□□□□□ -1.21
Scn8a-213ENSMUST00000201549 DysfQ9ESD7 2090 aa7.5□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Trav16nA0A075B634 117 aa7.5□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Id3P41133 119 aa7.5□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Q4KKZ1 196 aa7.5□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Pcnx2Q5DU28 2122 aa7.5□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Dad1P61804 113 aa7.5□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Tmem241Q3UME2 297 aa7.5□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ndufa11Q9D8B4 141 aa7.5□□□□□ -1.21
Scn8a-213ENSMUST00000201549 P01655 112 aa7.5□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Fbxl7Q5BJ29 491 aa7.5□□□□□ -1.21
Scn8a-213ENSMUST00000201549 SpinklQ8CEK3 90 aa7.5□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Tmem190Q9D2E9 166 aa7.5□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Crybb3Q9JJU9 211 aa7.5□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Hdgfl3Q9JMG7 202 aa7.5□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ighv1-62-1A0A075B5U3 116 aa7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Rnf183Q8QZS5 190 aa7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 LenepQ9WVB6 61 aa7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 CadB2RQC6 2225 aa7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Pou2af1Q64693 256 aa7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Zfp420Q7TMN8 578 aa7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Timm21Q8CCM6 249 aa7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ucn2Q99ML8 113 aa7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Hrct1Q9D6B9 109 aa7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Timm10bQ9WV96 100 aa7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Timm17aQ9Z0V8 171 aa7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ighv1-23A0A0A6YVW3 117 aa7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 SNORCQ9CXL7 121 aa7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ighv1-26A0A075B5V0 117 aa7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Gm7075D3Z497 112 aa7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Myod1P10085 318 aa7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Lage3Q9CR70 148 aa7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Gm29644A0A087WPG2 191 aa7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Pfn1P62962 140 aa7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Jpt2Q6PGH2 190 aaKnown RBP7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ube2cQ9D1C1 179 aa7.49□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ahctf1Q8CJF7 2243 aaKnown RBP7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Tcrg-V6A0A075B5Y8 134 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Igkv8-34A0A0G2JDU0 121 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Rpl36-ps4A0A140T8U4 117 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 P01789 122 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Tmem86bQ497J1 226 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Mpv17l2Q8VIK2 200 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Fer1l4A3KGK3 1992 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ly6c1P0CW02 131 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Gkn1Q9CR36 201 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 H2al1jA2BFR3 109 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Hbb-bsA8DUK4 147 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ccl12Q62401 104 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 ArtnQ9Z0L2 224 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Plxnb1Q8CJH3 2119 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ncoa6Q9JL19 2067 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Trav14-2A0A075B694 121 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Gtsf1lQ9CWD0 151 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Osr1Q9WVG7 266 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Klk4Q9Z0M1 255 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Usf3B2RUQ2 2221 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Gm12830F6XVH0 157 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 RhogP84096 191 aa7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Mrpl32Q9DCI9 187 aaKnown RBP7.48□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ighv8-2A0A0A6YW58 119 aa7.47□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Inafm1E9PV59 130 aa7.47□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ccl3P10855 92 aa7.47□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Ube2bP63147 152 aa7.47□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Olfr523Q8VFE7 317 aa7.47□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Fmc1Q9CR13 113 aa7.47□□□□□ -1.21
Scn8a-213ENSMUST00000201549 Crlf1Q9JM58 425 aa7.47□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 67.5 ms