RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Gtsf1lQ9CWD0 151 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 MrapQ9D159 127 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 Igkv4-68A0A0B4J1I7 117 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 Gm2174F6ZVF2 133 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 P03985 172 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 Xcl1P47993 114 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 Vmo1Q5SXG7 201 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 PcolceQ61398 468 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 Ss18l1Q8BW22 402 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 Gm20878L7N244 103 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 Ca5aP23589 299 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 Fbxl7Q5BJ29 491 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 Slc25a29Q8BL03 306 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 Slc17a9Q8VCL5 447 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 Timm23Q9WTQ8 209 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 Iglv3A0A0B4J1K5 122 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 Igkv8-24A0A140T8P5 121 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 P18528 98 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 Cdkn1aP39689 159 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 Tex26Q0VB26 296 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 Trav2Q5R1I9 109 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 Gng5Q80SZ7 68 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 Lypd1Q8BLC3 141 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 TdhQ8K3F7 373 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 PerpQ9JK95 193 aa8.89□□□□□ -0.99
Ciita-201ENSMUST00000023147 Trav4-4-dv10A0A075B651 110 aa8.88□□□□□ -0.99
Ciita-201ENSMUST00000023147 Gm29289A0A087WPY7 166 aa8.88□□□□□ -0.99
Ciita-201ENSMUST00000023147 Efnb3O35393 340 aa8.88□□□□□ -0.99
Ciita-201ENSMUST00000023147 Cd69P37217 199 aa8.88□□□□□ -0.99
Ciita-201ENSMUST00000023147 Klk4Q9Z0M1 255 aa8.88□□□□□ -0.99
Ciita-201ENSMUST00000023147 Pth2Q91W27 100 aa8.88□□□□□ -0.99
Ciita-201ENSMUST00000023147 Sec16aA2AIX1 2377 aa8.88□□□□□ -0.99
Ciita-201ENSMUST00000023147 Ighv5-6A0A075B5Q0 117 aa8.88□□□□□ -0.99
Ciita-201ENSMUST00000023147 Edn1P22387 202 aa8.88□□□□□ -0.99
Ciita-201ENSMUST00000023147 Myo9bQ9QY06 2114 aa8.87□□□□□ -0.99
Ciita-201ENSMUST00000023147 Trdv1A0A075B657 112 aa8.87□□□□□ -0.99
Ciita-201ENSMUST00000023147 Gm2564F6Z9S8 108 aa8.87□□□□□ -0.99
Ciita-201ENSMUST00000023147 Ccl19O70460 108 aa8.87□□□□□ -0.99
Ciita-201ENSMUST00000023147 P18526 117 aa8.87□□□□□ -0.99
Ciita-201ENSMUST00000023147 Otx1P80205 355 aa8.87□□□□□ -0.99
Ciita-201ENSMUST00000023147 Pate2Q3UW31 111 aa8.87□□□□□ -0.99
Ciita-201ENSMUST00000023147 Isg15Q64339 161 aaKnown RBP8.87□□□□□ -0.99
Ciita-201ENSMUST00000023147 Hils1Q9QYL0 170 aa8.87□□□□□ -0.99
Ciita-201ENSMUST00000023147 Col5a3Q9JLI2 1739 aa8.87□□□□□ -0.99
Ciita-201ENSMUST00000023147 Loxhd1C8YR32 2068 aa8.87□□□□□ -0.99
Ciita-201ENSMUST00000023147 Pex7P97865 318 aa8.87□□□□□ -0.99
Ciita-201ENSMUST00000023147 3110018I06RikQ9CXS0 120 aa8.87□□□□□ -0.99
Ciita-201ENSMUST00000023147 Ighv1-18A0A0A6YXN4 117 aa8.87□□□□□ -0.99
Ciita-201ENSMUST00000023147 Igkv4-53A0A0G2JFC6 119 aa8.87□□□□□ -0.99
Ciita-201ENSMUST00000023147 Samd5Q3V1H9 173 aa8.87□□□□□ -0.99
Ciita-201ENSMUST00000023147 Olfr1373Q7TQT6 311 aa8.87□□□□□ -0.99
Ciita-201ENSMUST00000023147 Ypel3P61237 119 aa8.87□□□□□ -0.99
Ciita-201ENSMUST00000023147 Ndufa7Q9Z1P6 113 aaKnown RBP8.87□□□□□ -0.99
Ciita-201ENSMUST00000023147 Col4a6B1AVK5 1691 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 Tet2Q4JK59 1912 aaKnown RBP8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 Ly86O88188 162 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 ApohQ01339 345 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 Timm10bQ9WV96 100 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 Pcnx1Q9QYC1 2344 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 Zcwpw2Q08EN7 125 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 Gm10767Q3TQP0 103 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 Ube2wQ8VDW4 151 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 Leap2Q91V13 76 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 Obox1Q9D350 204 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 Plac1Q9JI83 173 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 Igkv13-85A0A075B666 115 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 Trav6d-3A0A075B6B3 112 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 GchfrP99025 84 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 Trav6-3Q5R1E6 112 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 Trav7d-3Q5R1I1 112 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 RetnlgQ8K426 117 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 Ube2cQ9D1C1 179 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 Tomm40Q9QYA2 361 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 Arfgef3Q3UGY8 2170 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 Slc25a39Q9D8K8 359 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 Lhx2Q9Z0S2 406 aa8.86□□□□□ -0.99
Ciita-201ENSMUST00000023147 Igkv4-61A0A0G2JH00 117 aa8.85□□□□□ -0.99
Ciita-201ENSMUST00000023147 CtsbP10605 339 aa8.85□□□□□ -0.99
Ciita-201ENSMUST00000023147 Ccl12Q62401 104 aa8.85□□□□□ -0.99
Ciita-201ENSMUST00000023147 Foxf2O54743 446 aa8.85□□□□□ -0.99
Ciita-201ENSMUST00000023147 KncnQ307W7 124 aa8.85□□□□□ -0.99
Ciita-201ENSMUST00000023147 Ndufa11Q9D8B4 141 aa8.85□□□□□ -0.99
Ciita-201ENSMUST00000023147 Wnk2Q3UH66 2149 aa8.85□□□□□ -0.99
Ciita-201ENSMUST00000023147 Atg2bQ80XK6 2075 aa8.85□□□□□ -0.99
Ciita-201ENSMUST00000023147 Igkv12-89A0A0G2JGW8 112 aa8.85□□□□□ -0.99
Ciita-201ENSMUST00000023147 Socs3O35718 225 aa8.85□□□□□ -0.99
Ciita-201ENSMUST00000023147 Gm21370Q3T9V6 190 aa8.85□□□□□ -0.99
Ciita-201ENSMUST00000023147 AgerQ62151 402 aa8.85□□□□□ -0.99
Ciita-201ENSMUST00000023147 Morn2Q6UL01 79 aa8.85□□□□□ -0.99
Ciita-201ENSMUST00000023147 Gm10306Q9CUK2 115 aa8.85□□□□□ -0.99
Ciita-201ENSMUST00000023147 Q9D8L0 127 aa8.85□□□□□ -0.99
Ciita-201ENSMUST00000023147 Spaca3Q9D9X8 221 aa8.85□□□□□ -0.99
Ciita-201ENSMUST00000023147 OtorQ9JIE3 128 aa8.85□□□□□ -0.99
Ciita-201ENSMUST00000023147 Trav6d-7A0A075B6B0 112 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 Gm45213A0A0U1RNZ6 101 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 Timm21Q8CCM6 249 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 Chac1Q8R3J5 223 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 PifoQ9D9W1 207 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 Inafm2A0A1L1STD6 152 aa8.84□□□□□ -0.99
Ciita-201ENSMUST00000023147 SNORCQ9CXL7 121 aa8.84□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 34.7 ms