RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Znrf2Q71FD5 238 aa8.15□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Vmn1r197Q8R265 298 aa8.15□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Prelid3aQ8VE85 172 aa8.15□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Slc25a15Q9WVD5 301 aa8.15□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Igkv4-51A0N8I8 119 aa8.15□□□□□ -1.1
Ldlr-201ENSMUST00000034713 BC035044E0CXF8 138 aa8.15□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Zfp420Q7TMN8 578 aa8.15□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Olfr433Q7TRV9 314 aa8.15□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Siglec12Q91Y57 467 aa8.15□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Plekhb2Q9QZC7 221 aa8.15□□□□□ -1.1
Ldlr-201ENSMUST00000034713 FancmQ8BGE5 2021 aa8.15□□□□□ -1.1
Ldlr-201ENSMUST00000034713 A0A1Y7VLU2 103 aa8.15□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Wdr86D3Z757 380 aa8.15□□□□□ -1.1
Ldlr-201ENSMUST00000034713 Trav7n-5A0A075B604 112 aa8.15□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Cox8bP48772 70 aa8.15□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Tusc5Q8C838 173 aa8.15□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Lrrk1Q3UHC2 2014 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Ighv9-3A0A0B4J1J5 117 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 P18526 117 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Q3UNZ8 350 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Trdv1A0A075B657 112 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Gm45785A0A1B0GT05 94 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 H2al1jA2BFR3 109 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 GrnP28798 589 aaKnown RBP8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Pex7P97865 318 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Rspo3Q2TJ95 277 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Gm10447Q3UQ92 135 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Wipf2Q6PEV3 440 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Pgpep1lQ9CWB5 130 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Dnal4Q9DCM4 105 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Olfr364-ps1A0A140T8Q2 307 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Cacng7P62956 275 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Zcwpw2Q08EN7 125 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 GaptQ8CB93 157 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Gm45213A0A0U1RNZ6 101 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Saa3P04918 122 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 SlpiP97430 131 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Zic4Q61467 341 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Tmem30bQ8BHG3 353 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Anapc13Q8R034 74 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Slc17a9Q8VCL5 447 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Atp5lQ9CPQ8 103 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Ormdl2Q9CQZ0 153 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Tmem167aQ9CR64 72 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Dmrtc1c1Q9D410 238 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Cbln3Q9JHG0 197 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Nat6Q9R123 314 aa8.14□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Notch3Q61982 2318 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Igkv14-111A0A140T8P9 117 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Folr2Q05685 251 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Srsf1Q6PDM2 248 aaKnown RBP8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Olfr810Q8VFH9 312 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Lmo1Q924W9 156 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Errfi1Q99JZ7 461 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Slamf6Q9ET39 351 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Sdk2Q6V4S5 2176 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Smlr1J3QMJ4 66 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Cxcl13O55038 109 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 HrkP62816 92 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Hspe1Q64433 102 aaKnown RBP8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Necap2Q9D1J1 266 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 PifoQ9D9W1 207 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Arpc1aQ9R0Q6 370 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Ighv1-34A0A075B5V2 117 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Cpsf4lE9Q2N0 280 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Foxl2O88470 375 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Znf787Q8BIF9 381 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Mob3bQ8VE04 216 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Olfr1402Q8VET1 320 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Slc25a39Q9D8K8 359 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 LitafQ9JLJ0 161 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Prok2Q9QXU7 128 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Dkk2Q9QYZ8 259 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 G6pc2Q9Z186 355 aa8.13□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Ighv5-12-4A0A0A6YWG4 117 aa8.12□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Igkv12-89A0A0G2JGW8 112 aa8.12□□□□□ -1.11
Ldlr-201ENSMUST00000034713 P04945 108 aa8.12□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Olfr1195Q8VG21 308 aa8.12□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Rpp25lQ99JH1 163 aa8.12□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Nit2Q9JHW2 276 aa8.12□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Lama2Q60675 3118 aaKnown RBP8.12□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Ighv7-3A0A075B5R2 120 aa8.12□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Igkv6-15A0A140T8M5 115 aa8.12□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Gm20379A0A087WR34 119 aa8.12□□□□□ -1.11
Ldlr-201ENSMUST00000034713 D930048N14RikA2AA67 225 aa8.12□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Itgb1bp1O35671 200 aa8.12□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Mex3bQ69Z36 601 aaKnown RBP8.12□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Samd10Q7TST3 202 aa8.12□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Rnf144bQ8BKD6 301 aa8.12□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Tmem219Q9D123 240 aa8.12□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Tmem91Q8C581 172 aa8.12□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Klk10Q99M20 278 aa8.12□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Spg11Q3UHA3 2430 aa8.12□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Zfp983E9PUT0 460 aa8.11□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Rnf166Q3U9F6 237 aa8.11□□□□□ -1.11
Ldlr-201ENSMUST00000034713 COA4Q8BT51 87 aa8.11□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Q8C708 225 aa8.11□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Olfr498Q8VEW2 330 aa8.11□□□□□ -1.11
Ldlr-201ENSMUST00000034713 Crybb3Q9JJU9 211 aa8.11□□□□□ -1.11
Ldlr-201ENSMUST00000034713 H2al2bA9Z055 111 aa8.11□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 36.8 ms