RNA–Protein interactions for RNA: ENSMUST00000130871.1

Gm28043-201, Transcript of E3 ubiquitin-protein ligase RNF8, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Gm28043, Length 6,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043-201ENSMUST00000130871 Snx22Q8C084 192 aa10.59□□□□□ -0.71
Gm28043-201ENSMUST00000130871 Hist3h2bbQ8CGP0 126 aa10.59□□□□□ -0.71
Gm28043-201ENSMUST00000130871 Hist3h2baQ9D2U9 126 aa10.59□□□□□ -0.71
Gm28043-201ENSMUST00000130871 Gm29666A0A087WQ99 126 aa10.58□□□□□ -0.71
Gm28043-201ENSMUST00000130871 Znf260Q62513 407 aa10.58□□□□□ -0.71
Gm28043-201ENSMUST00000130871 Hspe1Q64433 102 aaKnown RBP10.58□□□□□ -0.71
Gm28043-201ENSMUST00000130871 Psmg3Q9CZH3 122 aa10.58□□□□□ -0.71
Gm28043-201ENSMUST00000130871 Slc25a15Q9WVD5 301 aa10.58□□□□□ -0.71
Gm28043-201ENSMUST00000130871 Gnb1lQ9EQ15 326 aa10.58□□□□□ -0.72
Gm28043-201ENSMUST00000130871 OtofQ9ESF1 1997 aa10.58□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Olfr748E9Q9Z0 307 aa10.58□□□□□ -0.72
Gm28043-201ENSMUST00000130871 ElnP54320 860 aa10.58□□□□□ -0.72
Gm28043-201ENSMUST00000130871 LbhQ9CX60 105 aa10.58□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Cited2O35740 269 aa10.58□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Reg1P43137 165 aa10.58□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Pgpep1Q9ESW8 209 aa10.58□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Cbln3Q9JHG0 197 aa10.58□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Igh-VJ558P01758 117 aa10.58□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Csrp1P97315 193 aaKnown RBP10.58□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Rnf126Q91YL2 313 aa10.58□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Tmem89Q9DA04 169 aa10.58□□□□□ -0.72
Gm28043-201ENSMUST00000130871 A0A1Y7VMQ4 148 aa10.57□□□□□ -0.72
Gm28043-201ENSMUST00000130871 4931422A03RikA2BHN9 113 aa10.57□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Defa20Q45VN2 95 aa10.57□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Q4KKZ1 196 aa10.57□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Phpt1Q9DAK9 124 aa10.57□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Slamf6Q9ET39 351 aa10.57□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Gm19410A0A140LJC7 2098 aa10.57□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Ighv1-34A0A075B5V2 117 aa10.57□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Igkv14-130A0A0G2JF45 117 aa10.57□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Gm45785A0A1B0GT05 94 aa10.57□□□□□ -0.72
Gm28043-201ENSMUST00000130871 P04219 140 aa10.57□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Zfp27P10077 819 aa10.57□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Gm10803Q3TZS6 135 aa10.57□□□□□ -0.72
Gm28043-201ENSMUST00000130871 OpalinQ7M750 143 aa10.57□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Olfr484Q8VFD3 321 aa10.57□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Ttc6G3UYY4 1857 aa10.57□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Rhno1Q8K3A4 235 aa10.57□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Tmem92B7ZWI3 162 aa10.57□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Igkv9-123A0A140T8N8 117 aa10.56□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Smlr1J3QMJ4 66 aa10.56□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Cxcl13O55038 109 aa10.56□□□□□ -0.72
Gm28043-201ENSMUST00000130871 P01655 112 aa10.56□□□□□ -0.72
Gm28043-201ENSMUST00000130871 P18526 117 aa10.56□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Myo9bQ9QY06 2114 aa10.56□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Sec11aQ9R0P6 179 aa10.56□□□□□ -0.72
Gm28043-201ENSMUST00000130871 G6pc2Q9Z186 355 aa10.56□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Olfr1337A2ACY8 315 aa10.56□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Lynx1P0DP60 116 aa10.56□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Slc25a47Q6IS41 310 aa10.56□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Tmem167aQ9CR64 72 aa10.56□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Ube2d2bQ6ZWY6 147 aa10.56□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Trav16d-dv11A0A075B617 117 aa10.56□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Ucp1P12242 307 aa10.56□□□□□ -0.72
Gm28043-201ENSMUST00000130871 SonQ9QX47 2444 aaKnown RBP10.56□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Defa-rs12P50716 91 aa10.56□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Gm12845A0A0N4SUM5 588 aa10.55□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Ccl6P27784 116 aa10.55□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Iba57Q8CAK1 358 aaKnown RBP10.55□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Immp1lQ9CQU8 166 aa10.55□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Crim1Q9JLL0 1037 aa10.55□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Rchy1Q9CR50 261 aa10.55□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Med12A2AGH6 2190 aa10.55□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Psme4Q5SSW2 1843 aa10.55□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Ep300B2RWS6 2412 aa10.55□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Trdv1A0A075B657 112 aa10.55□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Lamtor2Q9JHS3 125 aa10.55□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Baz2aQ91YE5 1889 aaKnown RBP10.55□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Sipa1l3G3X9J0 1776 aa10.55□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Iglc2P01844 104 aa10.55□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Defa2P28309 93 aa10.55□□□□□ -0.72
Gm28043-201ENSMUST00000130871 AdmP97297 184 aa10.55□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Jpt2Q6PGH2 190 aaKnown RBP10.55□□□□□ -0.72
Gm28043-201ENSMUST00000130871 GrhprQ91Z53 328 aa10.55□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Spata45Q9CVW4 97 aa10.55□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Myo16Q5DU14 1919 aa10.54□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Gm43517E9PYS1 339 aa10.54□□□□□ -0.72
Gm28043-201ENSMUST00000130871 NdpP48744 131 aa10.54□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Gm904Q3V2L5 102 aa10.54□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Spsb3Q571F5 354 aa10.54□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Higd1aQ9JLR9 95 aa10.54□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Nrxn2E9Q7X7 1710 aa10.54□□□□□ -0.72
Gm28043-201ENSMUST00000130871 NmbQ9CR53 121 aa10.54□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Pgpep1lQ9CWB5 130 aa10.54□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Zswim8Q3UHH1 1832 aaKnown RBP10.54□□□□□ -0.72
Gm28043-201ENSMUST00000130871 TtrP07309 147 aa10.54□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Olfr1195Q8VG21 308 aa10.54□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Cd5lQ9QWK4 352 aa10.54□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Notch3Q61982 2318 aa10.54□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Defa-rs2P17534 91 aa10.53□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Dock7Q8R1A4 2130 aaKnown RBP10.53□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Frem1Q684R7 2191 aa10.53□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Gm7849D3YX03 116 aa10.53□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Msrb2Q78J03 175 aa10.53□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Igkv13-84A0A140T8N3 115 aa10.53□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Mrps11Q9DCA2 191 aaKnown RBP10.53□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Trbv13-3A0A0B4J1H2 113 aa10.53□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Fbxl7Q5BJ29 491 aa10.53□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Cmc4Q61908 68 aa10.53□□□□□ -0.72
Gm28043-201ENSMUST00000130871 Dph3Q8K0W9 82 aa10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms