RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Gm12888Q3UW77 119 aa13.77□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Immp2lQ8BPT6 175 aa13.77□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Zfpl1Q9DB43 310 aa13.77□□□□□ -0.2
Ubfd1-201ENSMUST00000033158 Trav6d-3A0A075B6B3 112 aa13.77□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Gm6812B1AXU1 112 aa13.77□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Gm10912Q3UXH0 145 aa13.77□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Trav6-3Q5R1E6 112 aa13.77□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 OstcQ78XF5 149 aa13.77□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 YrdcQ3U5F4 280 aa13.77□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 LgalslbQ7TPX9 165 aa13.77□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Gng5Q80SZ7 68 aa13.77□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Gm17430F6RSK3 157 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Klf12O35738 402 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Cdkn1aP39689 159 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Shisal1Q0VBP7 198 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Mob4Q6PEB6 225 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Morn2Q6UL01 79 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Myoz1Q9JK37 296 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Gm10073E9Q3T0 114 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Nutf2P61971 127 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Zfp72Q0VFY0 435 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Hcfc2Q9D968 241 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Opn3Q9WUK7 400 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Bcorl1A2AQH4 1781 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 3110082J24RikF6Z6Z2 108 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Olfr1199Q8VF94 310 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Hyls1Q9CXX0 307 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Dusp14Q9JLY7 198 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Thap8E9Q695 213 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 NgfP01139 241 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 ElaneQ3UP87 265 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Q8CF25 301 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Tmem129Q8K304 362 aa13.76□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 4931422A03RikA2BHN9 113 aa13.75□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Rnf217D3YYI7 515 aa13.75□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Zfp420Q7TMN8 578 aa13.75□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Wdr31Q9JHB4 367 aa13.75□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 ChodlQ9CXM0 273 aa13.75□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Rnf125Q9D9R0 233 aa13.75□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 OtofQ9ESF1 1997 aa13.75□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Cops9Q3U898 57 aa13.75□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Fam117aQ7TNF9 451 aa13.75□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Mrpl16Q99N93 251 aa13.75□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Znf22Q9ERU3 237 aa13.75□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Med12lQ8BQM9 2157 aa13.75□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Ighv1-15A0A0A6YXA5 117 aa13.75□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 P18526 117 aa13.75□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Olfr1380Q7TQT5 311 aa13.75□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Atxn7l1Q9CZ05 146 aa13.75□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Erg28Q9ERY9 140 aa13.75□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Igkv4-91A0A075B5L2 119 aa13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Igkv13-85A0A075B666 115 aa13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Trav3-3Q5R1C3 114 aa13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 SlaQ60898 281 aa13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Nrn1Q8CFV4 142 aa13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Col13a1Q9R1N9 751 aa13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Prr14lE9Q7C4 1971 aa13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Gm21616B6ZB74 166 aa13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Cxcl13O55038 109 aa13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Egr1P08046 533 aa13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Hist1h2bmP10854 126 aa13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Dynlt3P56387 116 aa13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Hist1h2bhQ64478 126 aa13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Hist2h2bbQ64525 126 aa13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Hist1h2bcQ6ZWY9 126 aaKnown RBP13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 AY761184Q9D848 116 aa13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Timm23Q9WTQ8 209 aa13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Vmn1r70Q8R254 298 aa13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Prelid3aQ8VE85 172 aa13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Mcrip2Q9CQB2 160 aaKnown RBP13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Q9DAZ5 108 aa13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Wnk2Q3UH66 2149 aa13.74□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Sumo2P61957 95 aaKnown RBP13.73□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Tmem91Q8C581 172 aa13.73□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Ccpg1osV9GXK1 122 aa13.73□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Ighv1-20A0A0A6YX66 117 aa13.73□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Psmg4P0C7N9 123 aa13.73□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Gstp2P46425 210 aa13.73□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 GchfrP99025 84 aa13.73□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 5930422O12RikQ8C4Y4 123 aa13.73□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Ms4a8Q99N10 290 aa13.73□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 4930544G11RikQ9CR99 193 aa13.73□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Olfr1419Q7TQS2 343 aa13.73□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Pmaip1Q9JM54 103 aa13.73□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 MpdzQ8VBX6 2055 aa13.73□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 1700015F17RikD3YUK8 150 aa13.73□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Olfr235E9Q9Z6 312 aa13.72□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 1700020N15RikL7MTX3 112 aa13.72□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Megf10Q6DIB5 1147 aa13.72□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Hils1Q9QYL0 170 aa13.72□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 RhogP84096 191 aa13.72□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Tcrg-V6A0A075B5Y8 134 aa13.72□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Amn1B8JKV0 258 aa13.72□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Ly6lH3BJG9 140 aa13.72□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Rnf5O35445 180 aa13.72□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Tmem95P0DJF3 176 aa13.72□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Cbln3Q9JHG0 197 aa13.72□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Ighv1-7A0A075B5T7 117 aa13.71□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Dnase2P56542 353 aa13.71□□□□□ -0.21
Ubfd1-201ENSMUST00000033158 Msrb2Q78J03 175 aa13.71□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 86.6 ms