RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W SSP120P39931 234 aaKnown RBP7.51□□□□□ -1.21
HDA1YNL021W MDE1P47095 244 aa7.51□□□□□ -1.21
HDA1YNL021W MRX6P48564 524 aa7.51□□□□□ -1.21
HDA1YNL021W TNA1P53322 534 aa7.51□□□□□ -1.21
HDA1YNL021W BSC5P53755 489 aa7.51□□□□□ -1.21
HDA1YNL021W DOT1Q04089 582 aaKnown RBP7.51□□□□□ -1.21
HDA1YNL021W SSL1Q04673 461 aaPredicted RBP7.51□□□□□ -1.21
HDA1YNL021W YOL159C-AQ3E769 90 aa7.51□□□□□ -1.21
HDA1YNL021W RIT1P23796 513 aa7.51□□□□□ -1.21
HDA1YNL021W FPS1P23900 669 aa7.51□□□□□ -1.21
HDA1YNL021W IMA1P53051 589 aa7.51□□□□□ -1.21
HDA1YNL021W YSA1Q01976 231 aa7.51□□□□□ -1.21
HDA1YNL021W PRP42Q03776 544 aaKnown RBP7.51□□□□□ -1.21
HDA1YNL021W ASM4Q05166 528 aa7.51□□□□□ -1.21
HDA1YNL021W BMS1Q08965 1183 aaKnown RBP7.51□□□□□ -1.21
HDA1YNL021W YPL277CQ08989 487 aa7.51□□□□□ -1.21
HDA1YNL021W TYE7P33122 291 aaPredicted RBP7.5□□□□□ -1.21
HDA1YNL021W SDH1Q00711 640 aa7.5□□□□□ -1.21
HDA1YNL021W GIS4Q04233 774 aa7.5□□□□□ -1.21
HDA1YNL021W AAD4Q07747 329 aa7.5□□□□□ -1.21
HDA1YNL021W YLL054CQ12244 843 aa7.5□□□□□ -1.21
HDA1YNL021W COQ4O13525 335 aa7.49□□□□□ -1.21
HDA1YNL021W POA1P38218 177 aa7.49□□□□□ -1.21
HDA1YNL021W PIK1P39104 1066 aa7.49□□□□□ -1.21
HDA1YNL021W CIT3P43635 486 aa7.49□□□□□ -1.21
HDA1YNL021W NGL3Q03210 505 aa7.49□□□□□ -1.21
HDA1YNL021W BMT6Q12291 365 aa7.49□□□□□ -1.21
HDA1YNL021W LYS2P07702 1392 aa7.49□□□□□ -1.21
HDA1YNL021W FBP1P09201 348 aa7.49□□□□□ -1.21
HDA1YNL021W CMP2P14747 604 aa7.49□□□□□ -1.21
HDA1YNL021W RPC82P32349 654 aa7.49□□□□□ -1.21
HDA1YNL021W UME6P39001 836 aa7.49□□□□□ -1.21
HDA1YNL021W KHA1P40309 873 aa7.49□□□□□ -1.21
HDA1YNL021W PRM2P40534 656 aa7.49□□□□□ -1.21
HDA1YNL021W CUZ1P53899 274 aa7.49□□□□□ -1.21
HDA1YNL021W GPD1Q00055 391 aaKnown RBP7.49□□□□□ -1.21
HDA1YNL021W YMR210WQ03649 449 aa7.49□□□□□ -1.21
HDA1YNL021W RSB1Q08417 382 aa7.49□□□□□ -1.21
HDA1YNL021W HRK1Q08732 759 aaKnown RBP7.49□□□□□ -1.21
HDA1YNL021W YOR223WQ12015 292 aa7.49□□□□□ -1.21
HDA1YNL021W APE1P14904 514 aa7.48□□□□□ -1.21
HDA1YNL021W SEC21P32074 935 aaKnown RBP7.48□□□□□ -1.21
HDA1YNL021W LYS5P50113 272 aa7.48□□□□□ -1.21
HDA1YNL021W SGF73P53165 657 aa7.48□□□□□ -1.21
HDA1YNL021W DUS1P53759 423 aaKnown RBP7.48□□□□□ -1.21
HDA1YNL021W TRI1Q05024 226 aa7.48□□□□□ -1.21
HDA1YNL021W ESC8Q08119 714 aa7.48□□□□□ -1.21
HDA1YNL021W PUS7Q08647 676 aaKnown RBP7.48□□□□□ -1.21
HDA1YNL021W RAS1P01119 309 aa7.48□□□□□ -1.21
HDA1YNL021W GCN4P03069 281 aa7.48□□□□□ -1.21
HDA1YNL021W URA3P03962 267 aa7.48□□□□□ -1.21
HDA1YNL021W GLK1P17709 500 aaKnown RBP7.48□□□□□ -1.21
HDA1YNL021W OSM1P21375 501 aaKnown RBP7.48□□□□□ -1.21
HDA1YNL021W RRP7P25368 297 aaPredicted RBP7.48□□□□□ -1.21
HDA1YNL021W ADK2P26364 225 aa7.48□□□□□ -1.21
HDA1YNL021W GPI10P30777 616 aa7.48□□□□□ -1.21
HDA1YNL021W PSD1P39006 500 aa7.48□□□□□ -1.21
HDA1YNL021W YJR061WP40355 935 aa7.48□□□□□ -1.21
HDA1YNL021W BST1P43571 1029 aa7.48□□□□□ -1.21
HDA1YNL021W SLP1Q12232 587 aa7.48□□□□□ -1.21
HDA1YNL021W GRX6Q12438 231 aa7.48□□□□□ -1.21
HDA1YNL021W PAR32Q12515 295 aaKnown RBP7.48□□□□□ -1.21
HDA1YNL021W QCR6P00127 147 aa7.47□□□□□ -1.21
HDA1YNL021W BIK1P11709 440 aa7.47□□□□□ -1.21
HDA1YNL021W ARG1P22768 420 aa7.47□□□□□ -1.21
HDA1YNL021W MNE1P24720 663 aa7.47□□□□□ -1.21
HDA1YNL021W MAC1P35192 417 aa7.47□□□□□ -1.21
HDA1YNL021W TEF4P36008 412 aaKnown RBP7.47□□□□□ -1.21
HDA1YNL021W YKR075CP36155 307 aa7.47□□□□□ -1.21
HDA1YNL021W PEF1P53238 335 aa7.47□□□□□ -1.21
HDA1YNL021W ADE16P54113 591 aaKnown RBP7.47□□□□□ -1.21
HDA1YNL021W UBP2Q01476 1272 aa7.47□□□□□ -1.21
HDA1YNL021W ATG11Q12527 1178 aa7.47□□□□□ -1.21
HDA1YNL021W RPS9AO13516 197 aaKnown RBP7.46□□□□□ -1.21
HDA1YNL021W YPT7P32939 208 aa7.46□□□□□ -1.21
HDA1YNL021W RMA1P36001 430 aaKnown RBP7.46□□□□□ -1.21
HDA1YNL021W YEL025CP39991 1188 aa7.46□□□□□ -1.21
HDA1YNL021W GID8P40208 455 aa7.46□□□□□ -1.21
HDA1YNL021W ARF3P40994 183 aaRIP-Chip data7.46□□□□□ -1.21not detected
HDA1YNL021W ALT1P52893 592 aa7.46□□□□□ -1.21
HDA1YNL021W FCP1Q03254 732 aa7.46□□□□□ -1.21
HDA1YNL021W YDR461C-AQ2V2P7 80 aa7.46□□□□□ -1.21
HDA1YNL021W ROM2P51862 1356 aaKnown RBP7.46□□□□□ -1.22
HDA1YNL021W SAC7P17121 654 aa7.46□□□□□ -1.22
HDA1YNL021W YCK2P23292 546 aaKnown RBP7.46□□□□□ -1.22
HDA1YNL021W ARP2P32381 391 aaKnown RBP7.46□□□□□ -1.22
HDA1YNL021W MRP20P32387 263 aa7.46□□□□□ -1.22
HDA1YNL021W POL31P46957 487 aa7.46□□□□□ -1.22
HDA1YNL021W YML119WQ03208 357 aa7.46□□□□□ -1.22
HDA1YNL021W RMT2Q03305 412 aa7.46□□□□□ -1.22
HDA1YNL021W TPP1Q03796 238 aa7.46□□□□□ -1.22
HDA1YNL021W YDR341CQ05506 607 aaKnown RBP7.46□□□□□ -1.22
HDA1YNL021W KEL3Q08979 651 aaPredicted RBP7.46□□□□□ -1.22
HDA1YNL021W REX3Q12090 404 aa7.46□□□□□ -1.22
HDA1YNL021W SFI1Q12369 946 aa7.46□□□□□ -1.22
HDA1YNL021W RPB2P08518 1224 aaKnown RBP7.45□□□□□ -1.22
HDA1YNL021W SAM35P14693 329 aa7.45□□□□□ -1.22
HDA1YNL021W MAE1P36013 669 aaKnown RBP7.45□□□□□ -1.22
HDA1YNL021W YHR218WP38899 603 aa7.45□□□□□ -1.22
HDA1YNL021W BUD8P41698 603 aa7.45□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms