RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A PRP24P49960 444 aaKnown RBP13.09□□□□□ -0.31
LSM3YLR438C-A QCR6P00127 147 aa13.08□□□□□ -0.32
LSM3YLR438C-A MGT1P26188 188 aa13.08□□□□□ -0.32
LSM3YLR438C-A PLC1P32383 869 aa13.08□□□□□ -0.32
LSM3YLR438C-A MND2P40577 368 aa13.08□□□□□ -0.32
LSM3YLR438C-A MIC19P43594 170 aa13.08□□□□□ -0.32
LSM3YLR438C-A RPS10BP46784 105 aaKnown RBP13.08□□□□□ -0.32
LSM3YLR438C-A TOF2Q02208 771 aa13.08□□□□□ -0.32
LSM3YLR438C-A ECM38Q05902 660 aaPredicted RBP13.08□□□□□ -0.32
LSM3YLR438C-A CDC73Q06697 393 aa13.08□□□□□ -0.32
LSM3YLR438C-A RPS10AQ08745 105 aaPredicted RBP13.08□□□□□ -0.32
LSM3YLR438C-A GCR1P07261 785 aa13.07□□□□□ -0.32
LSM3YLR438C-A YML002WP0CF17 737 aa13.07□□□□□ -0.32
LSM3YLR438C-A PAT1P25644 796 aaKnown RBP13.07□□□□□ -0.32
LSM3YLR438C-A GPI10P30777 616 aa13.07□□□□□ -0.32
LSM3YLR438C-A ISF1P32488 338 aa13.07□□□□□ -0.32
LSM3YLR438C-A YKR023WP36119 530 aaKnown RBP13.07□□□□□ -0.32
LSM3YLR438C-A MVP1P40959 511 aaKnown RBP13.07□□□□□ -0.32
LSM3YLR438C-A TRM112P53738 135 aaPredicted RBP13.07□□□□□ -0.32
LSM3YLR438C-A COG6P53959 839 aa13.07□□□□□ -0.32
LSM3YLR438C-A INP2Q03824 705 aa13.07□□□□□ -0.32
LSM3YLR438C-A NRT1Q08485 598 aa13.07□□□□□ -0.32
LSM3YLR438C-A CBC2Q08920 208 aaKnown RBP RIP-Chip data13.07□□□□□ -0.32not detected
LSM3YLR438C-A YDR034W-BQ6Q5X2 51 aa13.07□□□□□ -0.32
LSM3YLR438C-A AI5_ALPHAQ9ZZX1 630 aa13.07□□□□□ -0.32
LSM3YLR438C-A RAM1P22007 431 aa13.06□□□□□ -0.32
LSM3YLR438C-A ADD66P36040 267 aa13.06□□□□□ -0.32
LSM3YLR438C-A FUI1P38196 639 aa13.06□□□□□ -0.32
LSM3YLR438C-A SRP68P38687 599 aaKnown RBP13.06□□□□□ -0.32
LSM3YLR438C-A SCC4P40090 624 aa13.06□□□□□ -0.32
LSM3YLR438C-A TAN1P53072 289 aaPredicted RBP13.06□□□□□ -0.32
LSM3YLR438C-A CPR6P53691 371 aaKnown RBP13.06□□□□□ -0.32
LSM3YLR438C-A ADI1Q03677 179 aa13.06□□□□□ -0.32
LSM3YLR438C-A YLR012CQ07927 99 aa13.06□□□□□ -0.32
LSM3YLR438C-A MPC54Q08550 464 aa13.06□□□□□ -0.32
LSM3YLR438C-A PEP5P12868 1029 aa13.05□□□□□ -0.32
LSM3YLR438C-A PTC3P34221 468 aaKnown RBP13.05□□□□□ -0.32
LSM3YLR438C-A KES1P35844 434 aaKnown RBP13.05□□□□□ -0.32
LSM3YLR438C-A ATM1P40416 690 aa13.05□□□□□ -0.32
LSM3YLR438C-A UBP7P40453 1071 aa13.05□□□□□ -0.32
LSM3YLR438C-A ROK1P45818 564 aaPredicted RBP13.05□□□□□ -0.32
LSM3YLR438C-A RSM26P47141 266 aa13.05□□□□□ -0.32
LSM3YLR438C-A RTA1P53047 317 aa13.05□□□□□ -0.32
LSM3YLR438C-A RTN1Q04947 295 aaKnown RBP13.05□□□□□ -0.32
LSM3YLR438C-A AVL9Q12500 764 aa13.05□□□□□ -0.32
LSM3YLR438C-A CMD1P06787 147 aaKnown RBP13.04□□□□□ -0.32
LSM3YLR438C-A MET22P32179 357 aa13.04□□□□□ -0.32
LSM3YLR438C-A MRS6P32864 603 aaKnown RBP13.04□□□□□ -0.32
LSM3YLR438C-A COY1P34237 679 aa13.04□□□□□ -0.32
LSM3YLR438C-A PPE1P38796 400 aa13.04□□□□□ -0.32
LSM3YLR438C-A SNG1P46950 547 aa13.04□□□□□ -0.32
LSM3YLR438C-A NMA111P53920 997 aa13.04□□□□□ -0.32
LSM3YLR438C-A ENT5Q03769 411 aaKnown RBP13.04□□□□□ -0.32
LSM3YLR438C-A SEG1Q04279 960 aa13.04□□□□□ -0.32
LSM3YLR438C-A SGO1Q08490 590 aa13.04□□□□□ -0.32
LSM3YLR438C-A YOR387CQ08910 206 aa13.04□□□□□ -0.32
LSM3YLR438C-A MIS1P09440 975 aaKnown RBP13.03□□□□□ -0.32
LSM3YLR438C-A CBF1P17106 351 aa13.03□□□□□ -0.32
LSM3YLR438C-A AIM26P32858 118 aa13.03□□□□□ -0.32
LSM3YLR438C-A RDH54P38086 958 aa13.03□□□□□ -0.32
LSM3YLR438C-A KAP104P38217 918 aaKnown RBP13.03□□□□□ -0.32
LSM3YLR438C-A YBP1P38315 674 aa13.03□□□□□ -0.32
LSM3YLR438C-A MSR1P38714 643 aa13.03□□□□□ -0.32
LSM3YLR438C-A YHR131CP38835 850 aa13.03□□□□□ -0.32
LSM3YLR438C-A IML2P47031 731 aa13.03□□□□□ -0.32
LSM3YLR438C-A YJR039WP47107 1121 aa13.03□□□□□ -0.32
LSM3YLR438C-A MSH6Q03834 1242 aa13.03□□□□□ -0.32
LSM3YLR438C-A YDR344CQ05510 147 aa13.03□□□□□ -0.32
LSM3YLR438C-A YCS4Q06156 1176 aa13.03□□□□□ -0.32
LSM3YLR438C-A SWC7Q06707 132 aa13.03□□□□□ -0.32
LSM3YLR438C-A HOS1Q12214 470 aa13.03□□□□□ -0.32
LSM3YLR438C-A AFI1Q99222 893 aa13.03□□□□□ -0.32
LSM3YLR438C-A YPR117WQ06116 2489 aa13.03□□□□□ -0.32
LSM3YLR438C-A ADH4P10127 382 aa13.02□□□□□ -0.33
LSM3YLR438C-A LTV1P34078 463 aa13.02□□□□□ -0.33
LSM3YLR438C-A NRD1P53617 575 aaKnown RBP RIP-Chip data13.02□□□□□ -0.33not detected
LSM3YLR438C-A SLU7Q02775 382 aaKnown RBP13.02□□□□□ -0.33
LSM3YLR438C-A RPN4Q03465 531 aa13.02□□□□□ -0.33
LSM3YLR438C-A YMR027WQ04371 470 aa13.02□□□□□ -0.33
LSM3YLR438C-A DAP1Q12091 152 aa13.02□□□□□ -0.33
LSM3YLR438C-A SIR1P21691 654 aa13.01□□□□□ -0.33
LSM3YLR438C-A YAT2P40017 923 aa13.01□□□□□ -0.33
LSM3YLR438C-A DLD2P46681 530 aaKnown RBP13.01□□□□□ -0.33
LSM3YLR438C-A TUB4P53378 473 aa13.01□□□□□ -0.33
LSM3YLR438C-A PML39Q03760 334 aa13.01□□□□□ -0.33
LSM3YLR438C-A PNP1Q05788 311 aa13.01□□□□□ -0.33
LSM3YLR438C-A PDH1Q12428 516 aaKnown RBP13.01□□□□□ -0.33
LSM3YLR438C-A RAD1P06777 1100 aa13□□□□□ -0.33
LSM3YLR438C-A IMA3P0CW40 589 aa13□□□□□ -0.33
LSM3YLR438C-A IMA4P0CW41 589 aa13□□□□□ -0.33
LSM3YLR438C-A BET2P20133 325 aa13□□□□□ -0.33
LSM3YLR438C-A PEX5P35056 612 aa13□□□□□ -0.33
LSM3YLR438C-A MRPL40P36534 297 aa13□□□□□ -0.33
LSM3YLR438C-A POL12P38121 705 aaPredicted RBP13□□□□□ -0.33
LSM3YLR438C-A SMF2P38778 549 aa13□□□□□ -0.33
LSM3YLR438C-A GGA2P38817 585 aaKnown RBP13□□□□□ -0.33
LSM3YLR438C-A TRF5P48561 642 aaKnown RBP13□□□□□ -0.33
LSM3YLR438C-A YPR003CP53394 754 aa13□□□□□ -0.33
LSM3YLR438C-A YPL014WQ02606 381 aa13□□□□□ -0.33
LSM3YLR438C-A RLI1Q03195 608 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms