RNA–Protein interactions for RNA: YKL088W

CAB3, Transcript of Subunit of PPCDC and CoA-SPC complexes involved in CoA biosynthesis, yeast

Gene CAB3, Length 1,716 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAB3	YKL088W	RRT6	P53117	311 aa	Predicted RBP	5.06	□□□□□ -1.6
CAB3	YKL088W	HST3	P53687	447 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	ELA1	P53861	379 aa	Predicted RBP	5.06	□□□□□ -1.6
CAB3	YKL088W	CSR1	Q06705	408 aa	Known RBP	5.06	□□□□□ -1.6
CAB3	YKL088W	RIX7	Q07844	837 aa	Known RBP	5.06	□□□□□ -1.6
CAB3	YKL088W	FIG2	P25653	1609 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	MIS1	P09440	975 aa	Known RBP	5.06	□□□□□ -1.6
CAB3	YKL088W	CKA1	P15790	372 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	CBP3	P21560	335 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	GIC1	P38785	314 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	YIL166C	P40445	542 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	PRK1	P40494	810 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	YFL054C	P43549	646 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	IRC5	P43610	853 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	LSC2	P53312	427 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	SOK2	P53438	785 aa	Predicted RBP	5.06	□□□□□ -1.6
CAB3	YKL088W	RPT4	P53549	437 aa	Known RBP	5.06	□□□□□ -1.6
CAB3	YKL088W	HDA1	P53973	706 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	RPS15	Q01855	142 aa	Known RBP	5.06	□□□□□ -1.6
CAB3	YKL088W	YMR155W	Q03795	547 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	TFC6	Q06339	672 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	YLL054C	Q12244	843 aa		5.06	□□□□□ -1.6
CAB3	YKL088W	CAF20	P12962	161 aa	Known RBP	5.05	□□□□□ -1.6
CAB3	YKL088W	CDC26	P14724	124 aa		5.05	□□□□□ -1.6
CAB3	YKL088W	GSY2	P27472	705 aa		5.05	□□□□□ -1.6
CAB3	YKL088W	SIC1	P38634	284 aa		5.05	□□□□□ -1.6
CAB3	YKL088W	STT3	P39007	718 aa	Known RBP	5.05	□□□□□ -1.6
CAB3	YKL088W	IMA5	P40884	581 aa		5.05	□□□□□ -1.6
CAB3	YKL088W	ARF3	P40994	183 aa	RIP-Chip data	5.05	□□□□□ -1.6	not detected
CAB3	YKL088W	CLA4	P48562	842 aa		5.05	□□□□□ -1.6
CAB3	YKL088W	ARE2	P53629	642 aa	Known RBP	5.05	□□□□□ -1.6
CAB3	YKL088W	NOP15	P53927	220 aa	Predicted RBP	5.05	□□□□□ -1.6
CAB3	YKL088W	SFB2	P53953	876 aa		5.05	□□□□□ -1.6
CAB3	YKL088W	IRC4	Q03036	179 aa		5.05	□□□□□ -1.6
CAB3	YKL088W	EAR1	Q03212	550 aa		5.05	□□□□□ -1.6
CAB3	YKL088W	YDR341C	Q05506	607 aa	Known RBP	5.05	□□□□□ -1.6
CAB3	YKL088W	YLR257W	Q06146	321 aa	Known RBP	5.05	□□□□□ -1.6
CAB3	YKL088W	YOR059C	Q08448	450 aa	Known RBP	5.05	□□□□□ -1.6
CAB3	YKL088W	SFI1	Q12369	946 aa		5.05	□□□□□ -1.6
CAB3	YKL088W	YLR149C	Q99296	730 aa		5.05	□□□□□ -1.6
CAB3	YKL088W	CDC6	P09119	513 aa		5.04	□□□□□ -1.6
CAB3	YKL088W	YEL076C-A	P0CX16	216 aa		5.04	□□□□□ -1.6
CAB3	YKL088W	YLR464W	P0CX17	216 aa		5.04	□□□□□ -1.6
CAB3	YKL088W	POL3	P15436	1097 aa		5.04	□□□□□ -1.6
CAB3	YKL088W	AFT1	P22149	690 aa		5.04	□□□□□ -1.6
CAB3	YKL088W	LCB1	P25045	558 aa	Known RBP	5.04	□□□□□ -1.6
CAB3	YKL088W	SWI4	P25302	1093 aa	Known RBP	5.04	□□□□□ -1.6
CAB3	YKL088W	SGF29	P25554	259 aa		5.04	□□□□□ -1.6
CAB3	YKL088W	KRE2	P27809	442 aa		5.04	□□□□□ -1.6
CAB3	YKL088W	MCM4	P30665	933 aa	Known RBP	5.04	□□□□□ -1.6
CAB3	YKL088W	DGR2	P32330	852 aa		5.04	□□□□□ -1.6
CAB3	YKL088W	CBF2	P32504	956 aa		5.04	□□□□□ -1.6
CAB3	YKL088W	ASH1	P34233	588 aa		5.04	□□□□□ -1.6
CAB3	YKL088W	PTK1	P36002	662 aa	Predicted RBP	5.04	□□□□□ -1.6
CAB3	YKL088W	YKT6	P36015	200 aa	Known RBP	5.04	□□□□□ -1.6
CAB3	YKL088W	MRPL36	P36531	177 aa		5.04	□□□□□ -1.6
CAB3	YKL088W	TOS1	P38288	455 aa		5.04	□□□□□ -1.6
CAB3	YKL088W	SSZ1	P38788	538 aa	Known RBP	5.04	□□□□□ -1.6
CAB3	YKL088W	YEL076C	P39971	216 aa		5.04	□□□□□ -1.6
CAB3	YKL088W	LSM5	P40089	93 aa	Known RBP	5.04	□□□□□ -1.6
CAB3	YKL088W	CEP3	P40969	608 aa		5.04	□□□□□ -1.6
CAB3	YKL088W	ROG3	P43602	733 aa		5.04	□□□□□ -1.6
CAB3	YKL088W	YJR039W	P47107	1121 aa		5.04	□□□□□ -1.6
CAB3	YKL088W	CTH1	P47976	325 aa		5.04	□□□□□ -1.6
CAB3	YKL088W	YGR250C	P53316	781 aa	Known RBP	5.04	□□□□□ -1.6
CAB3	YKL088W	GPD1	Q00055	391 aa	Known RBP	5.04	□□□□□ -1.6
CAB3	YKL088W	SNO4	Q04902	237 aa		5.04	□□□□□ -1.6
CAB3	YKL088W	ADY3	Q07732	790 aa		5.04	□□□□□ -1.6
CAB3	YKL088W	HSP33	Q08914	237 aa	Known RBP	5.04	□□□□□ -1.6
CAB3	YKL088W	HSP32	Q08992	237 aa		5.04	□□□□□ -1.6
CAB3	YKL088W	RPS9A	O13516	197 aa	Known RBP	5.03	□□□□□ -1.6
CAB3	YKL088W	PRC1	P00729	532 aa		5.03	□□□□□ -1.6
CAB3	YKL088W	MET17	P06106	444 aa		5.03	□□□□□ -1.6
CAB3	YKL088W	ERG3	P32353	365 aa		5.03	□□□□□ -1.6
CAB3	YKL088W	BMH2	P34730	273 aa	Known RBP	5.03	□□□□□ -1.6
CAB3	YKL088W	MTC3	P53077	123 aa		5.03	□□□□□ -1.6
CAB3	YKL088W	DBP10	Q12389	995 aa	Known RBP	5.03	□□□□□ -1.6
CAB3	YKL088W	ISA2	Q12425	185 aa		5.03	□□□□□ -1.6
CAB3	YKL088W	NOP58	Q12499	511 aa	Known RBP	5.03	□□□□□ -1.6
CAB3	YKL088W	ILS1	P09436	1072 aa	Known RBP	5.03	□□□□□ -1.6
CAB3	YKL088W	BET2	P20133	325 aa		5.03	□□□□□ -1.6
CAB3	YKL088W	OLE1	P21147	510 aa	Known RBP	5.03	□□□□□ -1.6
CAB3	YKL088W	VPS1	P21576	704 aa	Known RBP	5.03	□□□□□ -1.6
CAB3	YKL088W	MYO3	P36006	1272 aa		5.03	□□□□□ -1.6
CAB3	YKL088W	TEF4	P36008	412 aa	Known RBP	5.03	□□□□□ -1.6
CAB3	YKL088W	FLR1	P38124	548 aa		5.03	□□□□□ -1.6
CAB3	YKL088W	AIM20	P40451	204 aa		5.03	□□□□□ -1.6
CAB3	YKL088W	UBP7	P40453	1071 aa		5.03	□□□□□ -1.6
CAB3	YKL088W	YFH7	P43591	353 aa		5.03	□□□□□ -1.6
CAB3	YKL088W	STU2	P46675	888 aa		5.03	□□□□□ -1.6
CAB3	YKL088W	YJL045W	P47052	634 aa		5.03	□□□□□ -1.6
CAB3	YKL088W	VID30	P53076	958 aa		5.03	□□□□□ -1.6
CAB3	YKL088W	ARP4	P80428	489 aa		5.03	□□□□□ -1.6
CAB3	YKL088W	WAR1	Q03631	944 aa		5.03	□□□□□ -1.6
CAB3	YKL088W	RRP9	Q06506	573 aa	Known RBP	5.03	□□□□□ -1.6
CAB3	YKL088W	IWR1	Q07532	353 aa	Predicted RBP	5.03	□□□□□ -1.6
CAB3	YKL088W	SMF3	Q12078	473 aa	Predicted RBP	5.03	□□□□□ -1.6
CAB3	YKL088W	HAL9	Q12180	1030 aa		5.03	□□□□□ -1.6
CAB3	YKL088W	MYO1	P08964	1928 aa		5.02	□□□□□ -1.61
CAB3	YKL088W	GSC2	P40989	1895 aa		5.02	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms