RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W VMA13P41807 478 aaKnown RBP4.36□□□□□ -1.71
PTR3YFR029W MET12P46151 657 aa4.36□□□□□ -1.71
PTR3YFR029W TCB2P48231 1178 aa4.36□□□□□ -1.71
PTR3YFR029W NAM8Q00539 523 aaKnown RBP4.36□□□□□ -1.71
PTR3YFR029W RPT6Q01939 405 aaKnown RBP4.36□□□□□ -1.71
PTR3YFR029W YLR456WQ06199 204 aa4.36□□□□□ -1.71
PTR3YFR029W TY3A-GQ12173 290 aa4.36□□□□□ -1.71
PTR3YFR029W AVL9Q12500 764 aa4.36□□□□□ -1.71
PTR3YFR029W TY3A-IQ99219 290 aa4.36□□□□□ -1.71
PTR3YFR029W ADE3P07245 946 aaKnown RBP4.35□□□□□ -1.71
PTR3YFR029W ADE2P21264 571 aaKnown RBP4.35□□□□□ -1.71
PTR3YFR029W RPL5P26321 297 aaKnown RBP4.35□□□□□ -1.71
PTR3YFR029W SSE1P32589 693 aaKnown RBP4.35□□□□□ -1.71
PTR3YFR029W SWH1P35845 1188 aa4.35□□□□□ -1.71
PTR3YFR029W MTG2P38860 518 aa4.35□□□□□ -1.71
PTR3YFR029W GPB2P39717 880 aa4.35□□□□□ -1.71
PTR3YFR029W NEO1P40527 1151 aa4.35□□□□□ -1.71
PTR3YFR029W ABZ2Q03266 374 aa4.35□□□□□ -1.71
PTR3YFR029W DIB1Q06819 143 aaPredicted RBP4.35□□□□□ -1.71
PTR3YFR029W IWR1Q07532 353 aaPredicted RBP4.35□□□□□ -1.71
PTR3YFR029W CTI6Q08923 506 aa4.35□□□□□ -1.71
PTR3YFR029W ALG6Q12001 544 aaKnown RBP4.35□□□□□ -1.71
PTR3YFR029W PSF3Q12146 194 aa4.35□□□□□ -1.71
PTR3YFR029W SNF5P18480 905 aa4.34□□□□□ -1.71
PTR3YFR029W SIR1P21691 654 aa4.34□□□□□ -1.71
PTR3YFR029W PRP22P24384 1145 aaKnown RBP4.34□□□□□ -1.71
PTR3YFR029W DMC1P25453 334 aa4.34□□□□□ -1.71
PTR3YFR029W ERV1P27882 189 aa4.34□□□□□ -1.71
PTR3YFR029W FRD1P32614 470 aaKnown RBP4.34□□□□□ -1.71
PTR3YFR029W MRE11P32829 692 aa4.34□□□□□ -1.71
PTR3YFR029W BUD2P33314 1104 aa4.34□□□□□ -1.71
PTR3YFR029W RPN3P40016 523 aaKnown RBP4.34□□□□□ -1.71
PTR3YFR029W AIM20P40451 204 aa4.34□□□□□ -1.71
PTR3YFR029W ALY2P47029 1046 aa4.34□□□□□ -1.71
PTR3YFR029W EOS1P53938 366 aa4.34□□□□□ -1.71
PTR3YFR029W SRT1Q03175 343 aa4.34□□□□□ -1.71
PTR3YFR029W YOR059CQ08448 450 aaKnown RBP4.34□□□□□ -1.71
PTR3YFR029W YEL076C-AP0CX16 216 aa4.34□□□□□ -1.71
PTR3YFR029W YLR464WP0CX17 216 aa4.34□□□□□ -1.71
PTR3YFR029W STE12P13574 688 aa4.34□□□□□ -1.71
PTR3YFR029W YCK1P23291 538 aa4.34□□□□□ -1.71
PTR3YFR029W SPS22P25380 463 aa4.34□□□□□ -1.71
PTR3YFR029W SMY1P32364 656 aaKnown RBP4.34□□□□□ -1.71
PTR3YFR029W YEL043WP32618 956 aa4.34□□□□□ -1.71
PTR3YFR029W ASH1P34233 588 aa4.34□□□□□ -1.71
PTR3YFR029W YKT6P36015 200 aaKnown RBP4.34□□□□□ -1.71
PTR3YFR029W SDS22P36047 338 aa4.34□□□□□ -1.71
PTR3YFR029W YKR018CP36114 725 aa4.34□□□□□ -1.71
PTR3YFR029W SRP68P38687 599 aaKnown RBP4.34□□□□□ -1.71
PTR3YFR029W PEX18P38855 283 aa4.34□□□□□ -1.71
PTR3YFR029W RPN10P38886 268 aaKnown RBP4.34□□□□□ -1.71
PTR3YFR029W VPS45P38932 577 aa4.34□□□□□ -1.71
PTR3YFR029W YEL076CP39971 216 aa4.34□□□□□ -1.71
PTR3YFR029W YJR061WP40355 935 aa4.34□□□□□ -1.71
PTR3YFR029W RLP7P40693 322 aaKnown RBP4.34□□□□□ -1.71
PTR3YFR029W NUP85P46673 744 aa4.34□□□□□ -1.71
PTR3YFR029W CUL3P53202 744 aa4.34□□□□□ -1.71
PTR3YFR029W YGR130CP53278 816 aa4.34□□□□□ -1.71
PTR3YFR029W SFB2P53953 876 aa4.34□□□□□ -1.71
PTR3YFR029W GPD1Q00055 391 aaKnown RBP4.34□□□□□ -1.71
PTR3YFR029W LEE1Q02799 301 aaKnown RBP4.34□□□□□ -1.71
PTR3YFR029W ARX1Q03862 593 aaKnown RBP4.34□□□□□ -1.71
PTR3YFR029W MRD1Q06106 887 aaKnown RBP4.34□□□□□ -1.71
PTR3YFR029W KAP95Q06142 861 aaKnown RBP4.34□□□□□ -1.71
PTR3YFR029W ENT4Q07872 247 aa4.34□□□□□ -1.71
PTR3YFR029W YLR149CQ99296 730 aa4.34□□□□□ -1.71
PTR3YFR029W NFS1P25374 497 aa4.33□□□□□ -1.72
PTR3YFR029W GBP2P25555 427 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
PTR3YFR029W UBP13P38187 747 aa4.33□□□□□ -1.72
PTR3YFR029W YSW1P38280 609 aa4.33□□□□□ -1.72
PTR3YFR029W ETP1P38748 585 aaKnown RBP4.33□□□□□ -1.72
PTR3YFR029W SSZ1P38788 538 aaKnown RBP4.33□□□□□ -1.72
PTR3YFR029W UTP9P38882 575 aaKnown RBP4.33□□□□□ -1.72
PTR3YFR029W SMF1P38925 575 aa4.33□□□□□ -1.72
PTR3YFR029W YER158CP40095 573 aa4.33□□□□□ -1.72
PTR3YFR029W TEL2P53038 688 aa4.33□□□□□ -1.72
PTR3YFR029W JJJ1P53863 590 aa4.33□□□□□ -1.72
PTR3YFR029W NOP15P53927 220 aaPredicted RBP4.33□□□□□ -1.72
PTR3YFR029W TY1A-DR2Q03964 440 aaKnown RBP4.33□□□□□ -1.72
PTR3YFR029W ECM18Q04623 453 aa4.33□□□□□ -1.72
PTR3YFR029W MDM36Q06820 579 aa4.33□□□□□ -1.72
PTR3YFR029W RTC5Q12108 567 aaKnown RBP4.33□□□□□ -1.72
PTR3YFR029W NMD4Q12129 218 aa4.33□□□□□ -1.72
PTR3YFR029W RPN5Q12250 445 aaKnown RBP4.33□□□□□ -1.72
PTR3YFR029W TUB2P02557 457 aaKnown RBP4.33□□□□□ -1.72
PTR3YFR029W HOM2P13663 365 aaKnown RBP4.33□□□□□ -1.72
PTR3YFR029W ARO3P14843 370 aaKnown RBP4.33□□□□□ -1.72
PTR3YFR029W RPB4P20433 221 aaPredicted RBP4.33□□□□□ -1.72
PTR3YFR029W NTG1P31378 399 aa4.33□□□□□ -1.72
PTR3YFR029W MRP20P32387 263 aa4.33□□□□□ -1.72
PTR3YFR029W MF(ALPHA)2P32435 120 aa4.33□□□□□ -1.72
PTR3YFR029W ASF2P32448 525 aaPredicted RBP4.33□□□□□ -1.72
PTR3YFR029W KRE6P32486 720 aa4.33□□□□□ -1.72
PTR3YFR029W YUH1P35127 236 aa4.33□□□□□ -1.72
PTR3YFR029W RMA1P36001 430 aaKnown RBP4.33□□□□□ -1.72
PTR3YFR029W APE3P37302 537 aaKnown RBP4.33□□□□□ -1.72
PTR3YFR029W TAF5P38129 798 aa4.33□□□□□ -1.72
PTR3YFR029W SMC2P38989 1170 aaKnown RBP4.33□□□□□ -1.72
PTR3YFR029W UME6P39001 836 aa4.33□□□□□ -1.72
PTR3YFR029W BEM4P39011 633 aa4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms