RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W PGC1Q08959 321 aa3.19□□□□□ -1.9
SWD3YBR175W ZRT2Q12436 422 aa3.19□□□□□ -1.9
SWD3YBR175W SKM1Q12469 655 aa3.19□□□□□ -1.9
SWD3YBR175W PCD1Q12524 340 aa3.19□□□□□ -1.9
SWD3YBR175W ATG11Q12527 1178 aa3.19□□□□□ -1.9
SWD3YBR175W URA3P03962 267 aa3.18□□□□□ -1.9
SWD3YBR175W TPK1P06244 397 aa3.18□□□□□ -1.9
SWD3YBR175W ILS1P09436 1072 aaKnown RBP3.18□□□□□ -1.9
SWD3YBR175W RPL19AP0CX82 189 aaKnown RBP3.18□□□□□ -1.9
SWD3YBR175W RPL19BP0CX83 189 aaPredicted RBP3.18□□□□□ -1.9
SWD3YBR175W PCK1P10963 549 aa3.18□□□□□ -1.9
SWD3YBR175W PMS1P14242 873 aa3.18□□□□□ -1.9
SWD3YBR175W ROX1P25042 368 aa3.18□□□□□ -1.9
SWD3YBR175W CWH43P25618 953 aa3.18□□□□□ -1.9
SWD3YBR175W UTP9P38882 575 aaKnown RBP3.18□□□□□ -1.9
SWD3YBR175W YJL068CP40363 299 aa3.18□□□□□ -1.9
SWD3YBR175W URM1P40554 99 aaPredicted RBP3.18□□□□□ -1.9
SWD3YBR175W TAF4P50105 388 aa3.18□□□□□ -1.9
SWD3YBR175W HOS2P53096 452 aaPredicted RBP3.18□□□□□ -1.9
SWD3YBR175W PEF1P53238 335 aa3.18□□□□□ -1.9
SWD3YBR175W GTF1P53260 183 aaPredicted RBP3.18□□□□□ -1.9
SWD3YBR175W YNR061CP53747 219 aa3.18□□□□□ -1.9
SWD3YBR175W VPS75P53853 264 aa3.18□□□□□ -1.9
SWD3YBR175W SQS1P53866 767 aaKnown RBP3.18□□□□□ -1.9
SWD3YBR175W ACS1Q01574 713 aa3.18□□□□□ -1.9
SWD3YBR175W YAP6Q03935 383 aa3.18□□□□□ -1.9
SWD3YBR175W HOS1Q12214 470 aa3.18□□□□□ -1.9
SWD3YBR175W COX17Q12287 69 aa3.18□□□□□ -1.9
SWD3YBR175W RTN2Q12443 393 aa3.18□□□□□ -1.9
SWD3YBR175W TY1B-AO13527 1196 aaKnown RBP3.17□□□□□ -1.9
SWD3YBR175W SEC53P07283 254 aaKnown RBP3.17□□□□□ -1.9
SWD3YBR175W SPE1P08432 466 aa3.17□□□□□ -1.9
SWD3YBR175W FBP1P09201 348 aa3.17□□□□□ -1.9
SWD3YBR175W PYC1P11154 1178 aaKnown RBP3.17□□□□□ -1.9
SWD3YBR175W FRS1P15624 595 aaKnown RBP3.17□□□□□ -1.9
SWD3YBR175W ARG1P22768 420 aa3.17□□□□□ -1.9
SWD3YBR175W ARP2P32381 391 aaKnown RBP3.17□□□□□ -1.9
SWD3YBR175W PET127P32606 800 aa3.17□□□□□ -1.9
SWD3YBR175W MTC7P32633 139 aa3.17□□□□□ -1.9
SWD3YBR175W LST4P34239 828 aa3.17□□□□□ -1.9
SWD3YBR175W CTF13P35203 478 aa3.17□□□□□ -1.9
SWD3YBR175W FSH1P38777 243 aaKnown RBP3.17□□□□□ -1.9
SWD3YBR175W SAK1P38990 1142 aa3.17□□□□□ -1.9
SWD3YBR175W POP2P39008 433 aa3.17□□□□□ -1.9
SWD3YBR175W LTP1P40347 161 aa3.17□□□□□ -1.9
SWD3YBR175W YIL166CP40445 542 aa3.17□□□□□ -1.9
SWD3YBR175W CAB2P40506 365 aa3.17□□□□□ -1.9
SWD3YBR175W SPO22P40511 975 aa3.17□□□□□ -1.9
SWD3YBR175W BUD8P41698 603 aa3.17□□□□□ -1.9
SWD3YBR175W BST1P43571 1029 aa3.17□□□□□ -1.9
SWD3YBR175W SIP4P46954 829 aa3.17□□□□□ -1.9
SWD3YBR175W MNN10P50108 393 aaKnown RBP3.17□□□□□ -1.9
SWD3YBR175W ZDS2P54786 942 aa3.17□□□□□ -1.9
SWD3YBR175W YSA1Q01976 231 aa3.17□□□□□ -1.9
SWD3YBR175W RMT2Q03305 412 aa3.17□□□□□ -1.9
SWD3YBR175W PRP3Q03338 469 aaPredicted RBP3.17□□□□□ -1.9
SWD3YBR175W YDR131CQ03899 556 aa3.17□□□□□ -1.9
SWD3YBR175W CRD1Q07560 283 aa3.17□□□□□ -1.9
SWD3YBR175W CIR2Q08822 631 aa3.17□□□□□ -1.9
SWD3YBR175W YPL191CQ08930 360 aa3.17□□□□□ -1.9
SWD3YBR175W PUS9Q12069 462 aa3.17□□□□□ -1.9
SWD3YBR175W HUA2Q12134 243 aa3.17□□□□□ -1.9
SWD3YBR175W GPR1Q12361 961 aa3.17□□□□□ -1.9
SWD3YBR175W ISA2Q12425 185 aa3.17□□□□□ -1.9
SWD3YBR175W YBR126W-AQ8TGU7 68 aa3.17□□□□□ -1.9
SWD3YBR175W YOR111WQ99210 232 aa3.17□□□□□ -1.9
SWD3YBR175W YLR302CO13544 120 aa3.16□□□□□ -1.9
SWD3YBR175W SUI3P09064 285 aaKnown RBP3.16□□□□□ -1.9
SWD3YBR175W CDC24P11433 854 aaPredicted RBP3.16□□□□□ -1.9
SWD3YBR175W HMG2P12684 1045 aa3.16□□□□□ -1.9
SWD3YBR175W PRP22P24384 1145 aaKnown RBP3.16□□□□□ -1.9
SWD3YBR175W MRP20P32387 263 aa3.16□□□□□ -1.9
SWD3YBR175W TRM2P33753 639 aa3.16□□□□□ -1.9
SWD3YBR175W RMA1P36001 430 aaKnown RBP3.16□□□□□ -1.9
SWD3YBR175W YHR078WP38799 552 aa3.16□□□□□ -1.9
SWD3YBR175W CTF8P38877 133 aa3.16□□□□□ -1.9
SWD3YBR175W FMP10P40098 244 aa3.16□□□□□ -1.9
SWD3YBR175W GID8P40208 455 aa3.16□□□□□ -1.9
SWD3YBR175W PFA3P42836 336 aa3.16□□□□□ -1.9
SWD3YBR175W ARC1P46672 376 aaKnown RBP3.16□□□□□ -1.9
SWD3YBR175W MRX6P48564 524 aa3.16□□□□□ -1.9
SWD3YBR175W GCV2P49095 1034 aa3.16□□□□□ -1.9
SWD3YBR175W TEL2P53038 688 aa3.16□□□□□ -1.9
SWD3YBR175W COG1P53079 417 aa3.16□□□□□ -1.9
SWD3YBR175W DSD1P53095 428 aa3.16□□□□□ -1.9
SWD3YBR175W MDR1P53258 950 aa3.16□□□□□ -1.9
SWD3YBR175W SLI1P53304 468 aa3.16□□□□□ -1.9
SWD3YBR175W YML119WQ03208 357 aa3.16□□□□□ -1.9
SWD3YBR175W VTI1Q04338 217 aa3.16□□□□□ -1.9
SWD3YBR175W ARP9Q05123 467 aa3.16□□□□□ -1.9
SWD3YBR175W YLR224WQ05947 369 aa3.16□□□□□ -1.9
SWD3YBR175W YLR345WQ06137 509 aa3.16□□□□□ -1.9
SWD3YBR175W VPS36Q06696 566 aa3.16□□□□□ -1.9
SWD3YBR175W SGO1Q08490 590 aa3.16□□□□□ -1.9
SWD3YBR175W NBP2Q12163 236 aa3.16□□□□□ -1.9
SWD3YBR175W BIK1P11709 440 aa3.15□□□□□ -1.91
SWD3YBR175W LCB1P25045 558 aaKnown RBP3.15□□□□□ -1.91
SWD3YBR175W OCA4P25366 362 aa3.15□□□□□ -1.91
SWD3YBR175W GPI10P30777 616 aa3.15□□□□□ -1.91
SWD3YBR175W DCG1P32460 244 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms