RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC3	YAL011W	UTP21	Q06078	939 aa	Predicted RBP	4.78	□□□□□ -1.64
SWC3	YAL011W	DBP9	Q06218	594 aa	Known RBP	4.78	□□□□□ -1.64
SWC3	YAL011W	CSR1	Q06705	408 aa	Known RBP	4.78	□□□□□ -1.64
SWC3	YAL011W	YDL073W	Q07454	984 aa		4.78	□□□□□ -1.64
SWC3	YAL011W	GUD1	Q07729	489 aa		4.78	□□□□□ -1.64
SWC3	YAL011W	INO1	P11986	533 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	CHS2	P14180	963 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	MSN1	P22148	382 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	PUP2	P32379	260 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	DOM34	P33309	386 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	SHP1	P34223	423 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	MCM7	P38132	845 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	ERC1	P38767	581 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	MEF2	P39677	819 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	SDS3	P40505	327 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	FIS1	P40515	155 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	MDE1	P47095	244 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	CEG1	Q01159	459 aa	Predicted RBP	4.77	□□□□□ -1.65
SWC3	YAL011W	MRS2	Q01926	470 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	FDC1	Q03034	503 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	SKY1	Q03656	742 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	YPQ2	Q06328	317 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	TSR1	Q07381	788 aa	Known RBP	4.77	□□□□□ -1.65
SWC3	YAL011W	CRD1	Q07560	283 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	NCR1	Q12200	1170 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	RUD3	Q12234	484 aa	Known RBP	4.77	□□□□□ -1.65
SWC3	YAL011W	ZRT2	Q12436	422 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	CSR2	Q12734	1121 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	HNM1	P19807	563 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	DBP5	P20449	482 aa	Known RBP	4.77	□□□□□ -1.65
SWC3	YAL011W	RAM1	P22007	431 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	ERG3	P32353	365 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	SQT1	P35184	431 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	UIP5	P36137	443 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	SHM2	P37291	469 aa	Known RBP	4.77	□□□□□ -1.65
SWC3	YAL011W	FTH1	P38310	465 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	YBR238C	P38330	731 aa	Known RBP	4.77	□□□□□ -1.65
SWC3	YAL011W	DYS1	P38791	387 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	FIR1	P40020	876 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	YJL068C	P40363	299 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	COS5	P47187	383 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	YGR130C	P53278	816 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	TIM8	P57744	87 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	PEX29	Q03370	554 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	YML082W	Q04533	649 aa	Known RBP	4.77	□□□□□ -1.65
SWC3	YAL011W	GAD1	Q04792	585 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	DUS3	Q06053	668 aa	Known RBP	4.77	□□□□□ -1.65
SWC3	YAL011W	SPH1	Q06160	661 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	OMS1	Q06668	471 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	ARP7	Q12406	477 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	KCS1	Q12494	1050 aa		4.77	□□□□□ -1.65
SWC3	YAL011W	MSD1	P15179	658 aa	Known RBP	4.76	□□□□□ -1.65
SWC3	YAL011W	HOP1	P20050	605 aa		4.76	□□□□□ -1.65
SWC3	YAL011W	CLB1	P24868	471 aa		4.76	□□□□□ -1.65
SWC3	YAL011W	SEC21	P32074	935 aa	Known RBP	4.76	□□□□□ -1.65
SWC3	YAL011W	NGG1	P32494	702 aa		4.76	□□□□□ -1.65
SWC3	YAL011W	UTR2	P32623	467 aa		4.76	□□□□□ -1.65
SWC3	YAL011W	GCG1	P32656	232 aa	Known RBP	4.76	□□□□□ -1.65
SWC3	YAL011W	MTH1	P35198	433 aa		4.76	□□□□□ -1.65
SWC3	YAL011W	LAS1	P36146	502 aa	Predicted RBP	4.76	□□□□□ -1.65
SWC3	YAL011W	PIM1	P36775	1133 aa		4.76	□□□□□ -1.65
SWC3	YAL011W	DPH1	P40487	425 aa	Known RBP	4.76	□□□□□ -1.65
SWC3	YAL011W	CAF16	P43569	289 aa		4.76	□□□□□ -1.65
SWC3	YAL011W	RSM26	P47141	266 aa		4.76	□□□□□ -1.65
SWC3	YAL011W	MON1	P53129	644 aa		4.76	□□□□□ -1.65
SWC3	YAL011W	ERV25	P54837	211 aa	Known RBP	4.76	□□□□□ -1.65
SWC3	YAL011W	YDR131C	Q03899	556 aa		4.76	□□□□□ -1.65
SWC3	YAL011W	ECI1	Q05871	280 aa		4.76	□□□□□ -1.65
SWC3	YAL011W	YOR223W	Q12015	292 aa		4.76	□□□□□ -1.65
SWC3	YAL011W	BI4	P03879	638 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	HEM13	P11353	328 aa	Known RBP	4.75	□□□□□ -1.65
SWC3	YAL011W	TCP1	P12612	559 aa	Known RBP	4.75	□□□□□ -1.65
SWC3	YAL011W	NAM7	P30771	971 aa	Known RBP	4.75	□□□□□ -1.65
SWC3	YAL011W	YSC83	P32792	385 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	MDL1	P33310	695 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	YKL107W	P34251	309 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	ATG19	P35193	415 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	MCR1	P36060	302 aa	Known RBP	4.75	□□□□□ -1.65
SWC3	YAL011W	OLA1	P38219	394 aa	Known RBP	4.75	□□□□□ -1.65
SWC3	YAL011W	ECM2	P38241	364 aa	Known RBP	4.75	□□□□□ -1.65
SWC3	YAL011W	CCZ1	P38273	704 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	EXO5	P38289	585 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	TDA3	P38758	523 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	PEX28	P38848	579 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	UTP9	P38882	575 aa	Known RBP	4.75	□□□□□ -1.65
SWC3	YAL011W	MBP1	P39678	833 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	YTA6	P40328	754 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	IMA5	P40884	581 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	SMK1	P41808	388 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	SKP2	P42843	763 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	POL31	P46957	487 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	MAD3	P47074	515 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	RPC17	P47076	161 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	TAM41	P53230	385 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	ZPR1	P53303	486 aa	Known RBP	4.75	□□□□□ -1.65
SWC3	YAL011W	ARC35	P53731	342 aa	Known RBP	4.75	□□□□□ -1.65
SWC3	YAL011W	JJJ1	P53863	590 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	TEP1	P53916	434 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	ESBP6	P53918	673 aa		4.75	□□□□□ -1.65
SWC3	YAL011W	NOG1	Q02892	647 aa	Known RBP	4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms