RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 Trim52Q8CDV4 233 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Slain2Q8CI08 581 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Hexim1Q8R409 356 aaKnown RBP9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Tmem143Q8VD26 458 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ppil4Q9CXG3 492 aaKnown RBP9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Dpf1Q9QX66 387 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 TnrQ8BYI9 1358 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Cyp3a57D3YYZ0 503 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ube3aO08759 870 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Surf1P09925 306 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Hspa2P17156 633 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 XpcP51612 930 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Psmb7P70195 277 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Bbof1Q3V079 533 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Kiaa1524Q8BWY9 907 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Tmem87aQ8BXN9 555 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Paf1Q8K2T8 535 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Exoc3l2D3YUP5 789 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Gm10378F6XQQ1 160 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Fchsd1Q6PFY1 688 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Atp1a2Q6PIE5 1020 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 ParvgQ9ERD8 331 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 MypnQ5DTJ9 1315 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Fbxl16A2RT62 479 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Irx2P81066 474 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ppp1r21Q3TDD9 780 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Tmem109Q3UBX0 243 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 SfswapQ3USH5 945 aaKnown RBP9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Rbm12b2Q66JV4 834 aaKnown RBP9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ncapg2Q6DFV1 1138 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Vps37dQ810I0 261 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Kcnj14Q8JZN3 434 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Tmx1Q8VBT0 278 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ncoa5Q91W39 579 aaKnown RBP9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Calml3Q9D6P8 149 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Smco2Q9DA21 347 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ftsj3Q9DBE9 838 aaKnown RBP9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 MycbpQ9EQS3 103 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Chaf1aQ9QWF0 911 aa9.5□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Itga6Q61739 1091 aa9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ggt6Q6PDE7 497 aa9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ube3bQ9ES34 1070 aa9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Irx5Q9JKQ4 484 aa9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Knop1Q9Z2Q2 478 aaKnown RBP9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Pde4bB1AWC9 736 aa9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Stx8O88983 236 aa9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Anxa1P10107 346 aaKnown RBP9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Igbp1Q61249 340 aa9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ncoa7Q6DFV7 943 aa9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Sdad1Q80UZ2 687 aaKnown RBP9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Vps53Q8CCB4 832 aa9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Gpr108Q91WD0 569 aa9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Tmem2Q5FWI3 1383 aa9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Snrpa1P57784 255 aaKnown RBP9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Krt39Q6IFX4 482 aa9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Znf532Q6NXK2 1036 aa9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Enox1Q8BHR2 643 aaKnown RBP9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Hgh1Q8C3I8 393 aa9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Desi2Q9D291 194 aa9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Cbx6Q9DBY5 414 aa9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Pkd2l2Q9JLG4 621 aa9.49□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Cps1Q8C196 1500 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Pcdhb9E9Q5G2 828 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Pram1Q6BCL1 675 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 TxlnaQ6PAM1 554 aaKnown RBP9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ehd4Q9EQP2 541 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Myo3bQ1EG27 1305 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Med23Q80YQ2 1367 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Speer4aF8VPX6 267 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Lipo1J3QME6 396 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ifit1bl2Q3U687 466 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Kif1bpQ6ZPU9 617 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ranbp6Q8BIV3 1105 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ankk1Q8BZ25 745 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Lrrd1Q8C0R9 853 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ufl1Q8CCJ3 793 aaKnown RBP9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ddx54Q8K4L0 874 aaKnown RBP9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Setdb1O88974 1307 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Pet2A2AHY8 747 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 ByslO54825 436 aaKnown RBP9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Plbd2Q3TCN2 594 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ap5z1Q3U829 807 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Abtb2Q7TQI7 1024 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Dclk3Q8BWQ5 790 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Efcab8Q8C9R9 203 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Bicdl2Q8CHW5 507 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Exoc1Q8R3S6 894 aa9.48□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Rbm43Q99J64 343 aa9.47□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ccdc43Q9CR29 222 aaKnown RBP9.47□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ttc14Q9CSP9 761 aa9.47□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Rai14Q9EP71 979 aaKnown RBP9.47□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Wdr19Q3UGF1 1341 aa9.47□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Carmil3Q3UFQ8 1375 aa9.47□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Prr29B1ARI9 187 aa9.47□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Rgs9O54828 675 aa9.47□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Pak1O88643 545 aa9.47□□□□□ -0.89
Bdnf-210ENSMUST00000111051 LtkP08923 888 aa9.47□□□□□ -0.89
Bdnf-210ENSMUST00000111051 GnaqP21279 359 aa9.47□□□□□ -0.89
Bdnf-210ENSMUST00000111051 PcQ05920 1178 aa9.47□□□□□ -0.89
Bdnf-210ENSMUST00000111051 Ssrp1Q08943 708 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms