RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C SCC2Q04002 1493 aa8.29□□□□□ -1.08
VPS4YPR173C MAK11P20484 414 aaKnown RBP8.29□□□□□ -1.08
VPS4YPR173C YMR1P47147 688 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08not detected
VPS4YPR173C ATG2P53855 1592 aa8.27□□□□□ -1.09
VPS4YPR173C RKR1Q04781 1562 aa8.27□□□□□ -1.09
VPS4YPR173C SET1P38827 1080 aaKnown RBP8.26□□□□□ -1.09
VPS4YPR173C YAP5P40574 245 aa8.24□□□□□ -1.09
VPS4YPR173C NUP170P38181 1502 aa8.23□□□□□ -1.09
VPS4YPR173C YOR238WQ08634 303 aa8.23□□□□□ -1.09
VPS4YPR173C SMC4Q12267 1418 aa8.22□□□□□ -1.09
VPS4YPR173C STH1P32597 1359 aa8.21□□□□□ -1.1
VPS4YPR173C SSM4P40318 1319 aa8.2□□□□□ -1.1
VPS4YPR173C RPO31P04051 1460 aa8.2□□□□□ -1.1
VPS4YPR173C DBP1P24784 617 aaKnown RBP8.2□□□□□ -1.1
VPS4YPR173C STS1P38637 319 aa8.2□□□□□ -1.1
VPS4YPR173C YFR006WP43590 535 aa8.2□□□□□ -1.1
VPS4YPR173C TOP2P06786 1428 aaKnown RBP8.2□□□□□ -1.1
VPS4YPR173C SNQ2P32568 1501 aaKnown RBP8.19□□□□□ -1.1
VPS4YPR173C ENP1P38333 483 aaKnown RBP8.17□□□□□ -1.1
VPS4YPR173C POL5P39985 1022 aaKnown RBP8.17□□□□□ -1.1
VPS4YPR173C KOG1P38873 1557 aa8.16□□□□□ -1.1
VPS4YPR173C MST1P07236 462 aa8.16□□□□□ -1.1
VPS4YPR173C COQ8P27697 501 aa8.16□□□□□ -1.1
VPS4YPR173C PIB1Q06651 286 aa8.16□□□□□ -1.1
VPS4YPR173C IFH1P39520 1085 aa8.15□□□□□ -1.1
VPS4YPR173C MIF2P35201 549 aa8.14□□□□□ -1.11
VPS4YPR173C NOP53Q12080 455 aaKnown RBP8.14□□□□□ -1.11
VPS4YPR173C PEP1P32319 1579 aa8.13□□□□□ -1.11
VPS4YPR173C YPR148CQ06523 435 aa8.12□□□□□ -1.11
VPS4YPR173C GEA1P47102 1408 aaPredicted RBP8.12□□□□□ -1.11
VPS4YPR173C YCF1P39109 1515 aaKnown RBP8.12□□□□□ -1.11
VPS4YPR173C VPS70P47161 811 aa8.11□□□□□ -1.11
VPS4YPR173C PAN1P32521 1480 aa8.11□□□□□ -1.11
VPS4YPR173C MLP2P40457 1679 aa8.09□□□□□ -1.11
VPS4YPR173C TSC11P40061 1430 aa8.08□□□□□ -1.12
VPS4YPR173C EDS1P38073 919 aa8.08□□□□□ -1.12
VPS4YPR173C PDR15Q04182 1529 aaKnown RBP8.08□□□□□ -1.12
VPS4YPR173C YBL029C-AQ3E756 94 aa8.07□□□□□ -1.12
VPS4YPR173C SEC3P33332 1336 aaKnown RBP8.07□□□□□ -1.12
VPS4YPR173C MDS3P53094 1487 aa8.06□□□□□ -1.12
VPS4YPR173C TY1B-DR3Q99231 1755 aa8.06□□□□□ -1.12
VPS4YPR173C VMA1P17255 1071 aaKnown RBP8.05□□□□□ -1.12
VPS4YPR173C RTT106P40161 455 aa8.05□□□□□ -1.12
VPS4YPR173C TY2B-LR1P0C2J3 1770 aa8.05□□□□□ -1.12
VPS4YPR173C TY2B-FP0CX63 1770 aa8.05□□□□□ -1.12
VPS4YPR173C TY2B-GR2P0CX64 1770 aa8.05□□□□□ -1.12
VPS4YPR173C TY2B-CP25384 1770 aa8.05□□□□□ -1.12
VPS4YPR173C TY2B-DR2Q03494 1770 aa8.05□□□□□ -1.12
VPS4YPR173C TY1B-DR1Q03855 1755 aa8.05□□□□□ -1.12
VPS4YPR173C TY2B-DR3Q07791 1770 aaKnown RBP8.05□□□□□ -1.12
VPS4YPR173C TY2B-OR1Q12113 1770 aa8.05□□□□□ -1.12
VPS4YPR173C TY2B-DR1Q12472 1770 aa8.05□□□□□ -1.12
VPS4YPR173C TY2B-OR2Q12501 1770 aa8.05□□□□□ -1.12
VPS4YPR173C CKB1P43639 278 aa8.04□□□□□ -1.12
VPS4YPR173C PTC3P34221 468 aaKnown RBP8.03□□□□□ -1.12
VPS4YPR173C LEU3P08638 886 aa8.02□□□□□ -1.13
VPS4YPR173C SPB4P25808 606 aaPredicted RBP8.01□□□□□ -1.13
VPS4YPR173C GTT3P39996 337 aa8.01□□□□□ -1.13
VPS4YPR173C SAM3Q08986 587 aa8.01□□□□□ -1.13
VPS4YPR173C ULS1Q08562 1619 aa8□□□□□ -1.13
VPS4YPR173C SPT7P35177 1332 aa7.99□□□□□ -1.13
VPS4YPR173C TY2B-BQ12491 1770 aa7.99□□□□□ -1.13
VPS4YPR173C LEO1P38439 464 aa7.98□□□□□ -1.13
VPS4YPR173C VNX1P42839 908 aa7.97□□□□□ -1.13
VPS4YPR173C VPS15P22219 1454 aa7.96□□□□□ -1.14
VPS4YPR173C TY3B-GQ99315 1547 aa7.95□□□□□ -1.14
VPS4YPR173C GRE2Q12068 342 aaKnown RBP7.94□□□□□ -1.14
VPS4YPR173C SNT2P53127 1403 aa7.94□□□□□ -1.14
VPS4YPR173C ATH1P48016 1211 aa7.93□□□□□ -1.14
VPS4YPR173C WSC3Q12215 556 aa7.93□□□□□ -1.14
VPS4YPR173C GUT1P32190 709 aa7.92□□□□□ -1.14
VPS4YPR173C TY1B-HO13535 1793 aa7.91□□□□□ -1.14
VPS4YPR173C TY1B-DR5P0C2I2 1755 aa7.91□□□□□ -1.14
VPS4YPR173C TY1B-DR6P0C2I3 1755 aa7.91□□□□□ -1.14
VPS4YPR173C TY1B-LR2P0C2I5 1755 aa7.91□□□□□ -1.14
VPS4YPR173C TY1B-LR3P0C2I6 1755 aaKnown RBP7.91□□□□□ -1.14
VPS4YPR173C TY1B-PR1P0C2I9 1755 aaKnown RBP7.91□□□□□ -1.14
VPS4YPR173C TY1B-PR2P0C2J0 1756 aa7.91□□□□□ -1.14
VPS4YPR173C TY1B-PR3P0C2J1 1755 aaKnown RBP7.91□□□□□ -1.14
VPS4YPR173C TY1B-JR1P47098 1755 aa7.91□□□□□ -1.14
VPS4YPR173C TY1B-ML2Q03434 1755 aaKnown RBP7.91□□□□□ -1.14
VPS4YPR173C TY1B-ER1Q03612 1755 aa7.91□□□□□ -1.14
VPS4YPR173C TY1B-ML1Q04711 1755 aaKnown RBP7.91□□□□□ -1.14
VPS4YPR173C TY1B-GR2Q12269 1755 aa7.91□□□□□ -1.14
VPS4YPR173C TY1B-OLQ12273 1755 aa7.91□□□□□ -1.14
VPS4YPR173C TY1B-PLQ12414 1755 aaKnown RBP7.91□□□□□ -1.14
VPS4YPR173C PBS2P08018 668 aa7.91□□□□□ -1.14
VPS4YPR173C GYP5Q12344 894 aa7.91□□□□□ -1.14
VPS4YPR173C VTH1P40438 1549 aa7.91□□□□□ -1.14
VPS4YPR173C VTH2P40890 1549 aa7.91□□□□□ -1.14
VPS4YPR173C ABP1P15891 592 aaKnown RBP7.9□□□□□ -1.14
VPS4YPR173C REF2P42073 533 aaPredicted RBP7.9□□□□□ -1.14
VPS4YPR173C YOL036WQ08206 761 aa7.9□□□□□ -1.14
VPS4YPR173C PDR10P51533 1564 aa7.89□□□□□ -1.15
VPS4YPR173C PRS1P32895 427 aaKnown RBP7.89□□□□□ -1.15
VPS4YPR173C MSB4Q12317 492 aa7.89□□□□□ -1.15
VPS4YPR173C CAT8P39113 1433 aa7.89□□□□□ -1.15
VPS4YPR173C SPP1Q03012 353 aa7.88□□□□□ -1.15
VPS4YPR173C TY1B-BRQ12193 1756 aa7.88□□□□□ -1.15
VPS4YPR173C TY1B-GR3Q12316 1755 aa7.88□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms