RNA–Protein interactions for RNA: YLR405W

DUS4, Transcript of Dihydrouridine synthase, yeastyeast

Gene DUS4, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DUS4YLR405W CHD1P32657 1468 aa9.1□□□□□ -0.95
DUS4YLR405W YOL036WQ08206 761 aa9.1□□□□□ -0.95
DUS4YLR405W VMA1P17255 1071 aaKnown RBP9.09□□□□□ -0.95
DUS4YLR405W RCR1P38212 213 aa9.09□□□□□ -0.95
DUS4YLR405W MYO2P19524 1574 aaKnown RBP9.08□□□□□ -0.96
DUS4YLR405W SET4P42948 560 aa9.08□□□□□ -0.96
DUS4YLR405W ESP1Q03018 1630 aa9.08□□□□□ -0.96
DUS4YLR405W SAM3Q08986 587 aa9.05□□□□□ -0.96
DUS4YLR405W TRP5P00931 707 aaKnown RBP9.02□□□□□ -0.97
DUS4YLR405W STU1P38198 1513 aa9.01□□□□□ -0.97
DUS4YLR405W SAS10Q12136 610 aaPredicted RBP9.01□□□□□ -0.97
DUS4YLR405W RQC2Q12532 1038 aaKnown RBP9□□□□□ -0.97
DUS4YLR405W POL1P13382 1468 aa8.99□□□□□ -0.97
DUS4YLR405W RTG1P32607 177 aa8.98□□□□□ -0.97
DUS4YLR405W BMT6Q12291 365 aa8.98□□□□□ -0.97
DUS4YLR405W YNL035CP53962 389 aaKnown RBP8.96□□□□□ -0.98
DUS4YLR405W ABP1P15891 592 aaKnown RBP8.95□□□□□ -0.98
DUS4YLR405W BUD4P47136 1447 aa8.95□□□□□ -0.98
DUS4YLR405W BPT1P14772 1559 aa8.95□□□□□ -0.98
DUS4YLR405W SEC61P32915 480 aa8.94□□□□□ -0.98
DUS4YLR405W NCR1Q12200 1170 aa8.94□□□□□ -0.98
DUS4YLR405W YTA7P40340 1379 aa8.94□□□□□ -0.98
DUS4YLR405W ATG2P53855 1592 aa8.93□□□□□ -0.98
DUS4YLR405W GYP5Q12344 894 aa8.92□□□□□ -0.98
DUS4YLR405W YPK9Q12697 1472 aa8.91□□□□□ -0.98
DUS4YLR405W ECM5Q03214 1411 aa8.9□□□□□ -0.98
DUS4YLR405W NOP2P40991 618 aaKnown RBP8.89□□□□□ -0.99
DUS4YLR405W RKR1Q04781 1562 aa8.88□□□□□ -0.99
DUS4YLR405W JIP4Q03361 876 aa8.87□□□□□ -0.99
DUS4YLR405W HTA1P04911 132 aaKnown RBP8.86□□□□□ -0.99
DUS4YLR405W HTA2P04912 132 aa8.86□□□□□ -0.99
DUS4YLR405W TFG1P41895 735 aaPredicted RBP8.86□□□□□ -0.99
DUS4YLR405W UFD4P33202 1483 aa8.84□□□□□ -0.99
DUS4YLR405W MAK11P20484 414 aaKnown RBP8.84□□□□□ -0.99
DUS4YLR405W DAN4P47179 1161 aa8.84□□□□□ -0.99
DUS4YLR405W TRM732Q03496 1420 aa8.84□□□□□ -0.99
DUS4YLR405W YOR1P53049 1477 aa8.83□□□□□ -1
DUS4YLR405W SCC2Q04002 1493 aa8.83□□□□□ -1
DUS4YLR405W RAM2P29703 316 aa8.83□□□□□ -1
DUS4YLR405W DCW1P36091 449 aa8.83□□□□□ -1
DUS4YLR405W PTC4P38089 393 aa8.8□□□□□ -1
DUS4YLR405W MYO4P32492 1471 aa8.8□□□□□ -1
DUS4YLR405W MIF2P35201 549 aa8.79□□□□□ -1
DUS4YLR405W YEL023CP39992 682 aa8.79□□□□□ -1
DUS4YLR405W GRE2Q12068 342 aaKnown RBP8.79□□□□□ -1
DUS4YLR405W PEP1P32319 1579 aa8.77□□□□□ -1.01
DUS4YLR405W IKI3Q06706 1349 aaKnown RBP8.77□□□□□ -1.01
DUS4YLR405W MDS3P53094 1487 aa8.77□□□□□ -1.01
DUS4YLR405W RPO31P04051 1460 aa8.76□□□□□ -1.01
DUS4YLR405W TAF7Q05021 590 aa8.75□□□□□ -1.01
DUS4YLR405W STH1P32597 1359 aa8.74□□□□□ -1.01
DUS4YLR405W SMC4Q12267 1418 aa8.74□□□□□ -1.01
DUS4YLR405W SAP30P38429 201 aa8.74□□□□□ -1.01
DUS4YLR405W YDL129WQ07555 291 aa8.74□□□□□ -1.01
DUS4YLR405W TOP2P06786 1428 aaKnown RBP8.73□□□□□ -1.01
DUS4YLR405W PTC3P34221 468 aaKnown RBP8.73□□□□□ -1.01
DUS4YLR405W SNQ2P32568 1501 aaKnown RBP8.73□□□□□ -1.01
DUS4YLR405W GUT1P32190 709 aa8.72□□□□□ -1.01
DUS4YLR405W EDS1P38073 919 aa8.72□□□□□ -1.01
DUS4YLR405W IFH1P39520 1085 aa8.72□□□□□ -1.01
DUS4YLR405W ATH1P48016 1211 aa8.72□□□□□ -1.01
DUS4YLR405W COQ8P27697 501 aa8.71□□□□□ -1.02
DUS4YLR405W YCF1P39109 1515 aaKnown RBP8.7□□□□□ -1.02
DUS4YLR405W SSM4P40318 1319 aa8.69□□□□□ -1.02
DUS4YLR405W MLP2P40457 1679 aa8.66□□□□□ -1.02
DUS4YLR405W TY2B-LR1P0C2J3 1770 aa8.66□□□□□ -1.02
DUS4YLR405W TY2B-FP0CX63 1770 aa8.66□□□□□ -1.02
DUS4YLR405W TY2B-GR2P0CX64 1770 aa8.66□□□□□ -1.02
DUS4YLR405W TY2B-CP25384 1770 aa8.66□□□□□ -1.02
DUS4YLR405W TY2B-DR2Q03494 1770 aa8.66□□□□□ -1.02
DUS4YLR405W TY1B-DR1Q03855 1755 aa8.66□□□□□ -1.02
DUS4YLR405W TY2B-DR3Q07791 1770 aaKnown RBP8.66□□□□□ -1.02
DUS4YLR405W TY2B-OR1Q12113 1770 aa8.66□□□□□ -1.02
DUS4YLR405W TY2B-DR1Q12472 1770 aa8.66□□□□□ -1.02
DUS4YLR405W TY2B-OR2Q12501 1770 aa8.66□□□□□ -1.02
DUS4YLR405W SPP41P38904 1435 aa8.65□□□□□ -1.02
DUS4YLR405W CHL1P22516 861 aaPredicted RBP8.65□□□□□ -1.02
DUS4YLR405W TY1B-DR3Q99231 1755 aa8.65□□□□□ -1.02
DUS4YLR405W PDR15Q04182 1529 aaKnown RBP8.64□□□□□ -1.03
DUS4YLR405W NOP53Q12080 455 aaKnown RBP8.63□□□□□ -1.03
DUS4YLR405W PRE3P38624 215 aa8.62□□□□□ -1.03
DUS4YLR405W GEA1P47102 1408 aaPredicted RBP8.62□□□□□ -1.03
DUS4YLR405W NUP170P38181 1502 aa8.61□□□□□ -1.03
DUS4YLR405W PML39Q03760 334 aa8.61□□□□□ -1.03
DUS4YLR405W TY2B-BQ12491 1770 aa8.59□□□□□ -1.03
DUS4YLR405W PAN1P32521 1480 aa8.58□□□□□ -1.04
DUS4YLR405W NST1P53935 1240 aa8.58□□□□□ -1.04
DUS4YLR405W ULS1Q08562 1619 aa8.57□□□□□ -1.04
DUS4YLR405W TSC11P40061 1430 aa8.56□□□□□ -1.04
DUS4YLR405W BCK2P33306 851 aa8.55□□□□□ -1.04
DUS4YLR405W SOL3P38858 249 aa8.55□□□□□ -1.04
DUS4YLR405W AI4P03878 556 aa8.53□□□□□ -1.04
DUS4YLR405W MPH3P0CE00 602 aa8.53□□□□□ -1.04
DUS4YLR405W RTT106P40161 455 aa8.52□□□□□ -1.05
DUS4YLR405W ENP1P38333 483 aaKnown RBP8.51□□□□□ -1.05
DUS4YLR405W POL5P39985 1022 aaKnown RBP8.51□□□□□ -1.05
DUS4YLR405W TY1B-HO13535 1793 aa8.5□□□□□ -1.05
DUS4YLR405W TY1B-DR5P0C2I2 1755 aa8.5□□□□□ -1.05
DUS4YLR405W TY1B-DR6P0C2I3 1755 aa8.5□□□□□ -1.05
DUS4YLR405W TY1B-LR2P0C2I5 1755 aa8.5□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 6.5 ms