RNA–Protein interactions for RNA: YLR383W

SMC6, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene SMC6, Length 3,345 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC6YLR383W YRF1-5P0CX21 1796 aa4.26□□□□□ -1.73
SMC6YLR383W YRF1-8P0CX22 1796 aa4.26□□□□□ -1.73
SMC6YLR383W SNQ2P32568 1501 aaKnown RBP4.26□□□□□ -1.73
SMC6YLR383W UFD4P33202 1483 aa4.25□□□□□ -1.73
SMC6YLR383W SKI3P17883 1432 aaKnown RBP4.24□□□□□ -1.73
SMC6YLR383W DNF1P32660 1571 aa4.24□□□□□ -1.73
SMC6YLR383W MMS22Q06164 1454 aa4.23□□□□□ -1.73
SMC6YLR383W VTH1P40438 1549 aa4.23□□□□□ -1.73
SMC6YLR383W VTH2P40890 1549 aa4.23□□□□□ -1.73
SMC6YLR383W YTA7P40340 1379 aa4.22□□□□□ -1.73
SMC6YLR383W SPO14P36126 1683 aa4.21□□□□□ -1.74
SMC6YLR383W YBT1P32386 1661 aa4.19□□□□□ -1.74
SMC6YLR383W GDB1Q06625 1536 aa4.18□□□□□ -1.74
SMC6YLR383W VPS15P22219 1454 aa4.17□□□□□ -1.74
SMC6YLR383W DOP1Q03921 1698 aa4.17□□□□□ -1.74
SMC6YLR383W BUD3P25558 1636 aa4.16□□□□□ -1.74
SMC6YLR383W IQG1Q12280 1495 aa4.16□□□□□ -1.74
SMC6YLR383W SPP41P38904 1435 aa4.16□□□□□ -1.74
SMC6YLR383W TSC11P40061 1430 aa4.16□□□□□ -1.74
SMC6YLR383W BNI1P41832 1953 aa4.16□□□□□ -1.74
SMC6YLR383W LTE1P07866 1435 aa4.15□□□□□ -1.74
SMC6YLR383W GEA2P39993 1459 aaKnown RBP4.15□□□□□ -1.75
SMC6YLR383W PDR5P33302 1511 aaKnown RBP4.15□□□□□ -1.75
SMC6YLR383W CHC1P22137 1653 aaKnown RBP4.14□□□□□ -1.75
SMC6YLR383W TY3B-GQ99315 1547 aa4.14□□□□□ -1.75
SMC6YLR383W RSE1Q04693 1361 aaKnown RBP4.13□□□□□ -1.75
SMC6YLR383W TRM3Q07527 1436 aa4.13□□□□□ -1.75
SMC6YLR383W CAT8P39113 1433 aa4.11□□□□□ -1.75
SMC6YLR383W RQC2Q12532 1038 aaKnown RBP4.09□□□□□ -1.76
SMC6YLR383W NUP159P40477 1460 aa4.08□□□□□ -1.76
SMC6YLR383W ARO1P08566 1588 aaKnown RBP4.07□□□□□ -1.76
SMC6YLR383W PDR15Q04182 1529 aaKnown RBP4.07□□□□□ -1.76
SMC6YLR383W PRY3P47033 881 aa4.06□□□□□ -1.76
SMC6YLR383W STH1P32597 1359 aa4.05□□□□□ -1.76
SMC6YLR383W TRM732Q03496 1420 aa4.04□□□□□ -1.76
SMC6YLR383W DNF2Q12675 1612 aa4.04□□□□□ -1.76
SMC6YLR383W GCN2P15442 1659 aa4.03□□□□□ -1.76
SMC6YLR383W SEC7P11075 2009 aaKnown RBP3.99□□□□□ -1.77
SMC6YLR383W YOR093CQ12275 1648 aa3.99□□□□□ -1.77
SMC6YLR383W SPT21P35209 758 aa3.98□□□□□ -1.77
SMC6YLR383W NUP188P52593 1655 aaKnown RBP3.98□□□□□ -1.77
SMC6YLR383W PRI1P10363 409 aa3.96□□□□□ -1.78
SMC6YLR383W RPG1P38249 964 aaKnown RBP3.95□□□□□ -1.78
SMC6YLR383W VMR1P38735 1592 aa3.95□□□□□ -1.78
SMC6YLR383W ISW2Q08773 1120 aa3.95□□□□□ -1.78
SMC6YLR383W MMS1Q06211 1407 aa3.95□□□□□ -1.78
SMC6YLR383W DMA1P38823 416 aa3.94□□□□□ -1.78
SMC6YLR383W GEA1P47102 1408 aaPredicted RBP3.94□□□□□ -1.78
SMC6YLR383W RIM101P33400 625 aa3.94□□□□□ -1.78
SMC6YLR383W TY1B-NL2Q99337 1749 aaKnown RBP3.94□□□□□ -1.78
SMC6YLR383W DNF3Q12674 1656 aa3.93□□□□□ -1.78
SMC6YLR383W YSP2Q06681 1438 aa3.93□□□□□ -1.78
SMC6YLR383W TAF7Q05021 590 aa3.92□□□□□ -1.78
SMC6YLR383W SRB8P25648 1427 aa3.9□□□□□ -1.79
SMC6YLR383W RPL17AP05740 184 aaKnown RBP3.89□□□□□ -1.79
SMC6YLR383W RPL17BP46990 184 aaKnown RBP3.89□□□□□ -1.79
SMC6YLR383W NUP192P47054 1683 aa3.88□□□□□ -1.79
SMC6YLR383W IKI3Q06706 1349 aaKnown RBP3.86□□□□□ -1.79
SMC6YLR383W OXP1P28273 1286 aa3.85□□□□□ -1.79
SMC6YLR383W IML1P47170 1584 aa3.85□□□□□ -1.79
SMC6YLR383W DRS2P39524 1355 aa3.85□□□□□ -1.79
SMC6YLR383W MET10P39692 1035 aa3.83□□□□□ -1.8
SMC6YLR383W PTP3P40048 928 aa3.82□□□□□ -1.8
SMC6YLR383W NUP157P40064 1391 aaKnown RBP3.82□□□□□ -1.8
SMC6YLR383W TY3B-IQ7LHG5 1498 aaKnown RBP3.82□□□□□ -1.8
SMC6YLR383W SAS10Q12136 610 aaPredicted RBP3.78□□□□□ -1.8
SMC6YLR383W YRF1-2P40105 1681 aa3.78□□□□□ -1.8
SMC6YLR383W SSP1P38871 571 aa3.78□□□□□ -1.8
SMC6YLR383W YKR023WP36119 530 aaKnown RBP3.77□□□□□ -1.81
SMC6YLR383W YLR271WQ06152 274 aa3.77□□□□□ -1.81
SMC6YLR383W CFT1Q06632 1357 aaKnown RBP3.77□□□□□ -1.81
SMC6YLR383W MIF2P35201 549 aa3.77□□□□□ -1.81
SMC6YLR383W REB1P21538 810 aa3.75□□□□□ -1.81
SMC6YLR383W LEO1P38439 464 aa3.75□□□□□ -1.81
SMC6YLR383W AAD16Q02895 342 aa3.74□□□□□ -1.81
SMC6YLR383W HAA1Q12753 694 aaKnown RBP3.73□□□□□ -1.81
SMC6YLR383W BCK1Q01389 1478 aa3.72□□□□□ -1.81
SMC6YLR383W RAV1P47104 1357 aa3.72□□□□□ -1.81
SMC6YLR383W BNR1P40450 1375 aa3.71□□□□□ -1.82
SMC6YLR383W TSR3Q12094 313 aaKnown RBP3.7□□□□□ -1.82
SMC6YLR383W APC1P53886 1748 aa3.7□□□□□ -1.82
SMC6YLR383W ITT1Q04638 464 aa3.69□□□□□ -1.82
SMC6YLR383W RRP5Q05022 1729 aaKnown RBP3.68□□□□□ -1.82
SMC6YLR383W USO1P25386 1790 aa3.68□□□□□ -1.82
SMC6YLR383W LEU3P08638 886 aa3.67□□□□□ -1.82
SMC6YLR383W CST9Q06032 482 aa3.67□□□□□ -1.82
SMC6YLR383W PDR11P40550 1411 aa3.67□□□□□ -1.82
SMC6YLR383W IOC4Q04213 475 aa3.67□□□□□ -1.82
SMC6YLR383W SSM4P40318 1319 aa3.67□□□□□ -1.82
SMC6YLR383W PSD2P53037 1138 aaKnown RBP3.66□□□□□ -1.82
SMC6YLR383W ABP1P15891 592 aaKnown RBP3.65□□□□□ -1.82
SMC6YLR383W RTC1Q08281 1341 aa3.65□□□□□ -1.83
SMC6YLR383W TFC8Q12308 588 aa3.64□□□□□ -1.83
SMC6YLR383W YCK3P39962 524 aa3.64□□□□□ -1.83
SMC6YLR383W MGA2P40578 1113 aa3.64□□□□□ -1.83
SMC6YLR383W YAH1Q12184 172 aaKnown RBP3.63□□□□□ -1.83
SMC6YLR383W EDE1P34216 1381 aa3.63□□□□□ -1.83
SMC6YLR383W URN1Q06525 465 aaKnown RBP3.63□□□□□ -1.83
SMC6YLR383W TY4B-HP0C2J7 1802 aa3.61□□□□□ -1.83
SMC6YLR383W TY4B-JP47024 1803 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms