RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeastyeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PWP1YLR196W SPT7P35177 1332 aa6.69□□□□□ -1.34
PWP1YLR196W RLP24Q07915 199 aaKnown RBP6.68□□□□□ -1.34
PWP1YLR196W PEP1P32319 1579 aa6.67□□□□□ -1.34
PWP1YLR196W SNQ2P32568 1501 aaKnown RBP6.66□□□□□ -1.34
PWP1YLR196W SPP41P38904 1435 aa6.66□□□□□ -1.34
PWP1YLR196W PLP2Q12017 286 aa6.66□□□□□ -1.34
PWP1YLR196W KOG1P38873 1557 aa6.65□□□□□ -1.35
PWP1YLR196W TY2B-BQ12491 1770 aa6.65□□□□□ -1.35
PWP1YLR196W RPO31P04051 1460 aa6.64□□□□□ -1.35
PWP1YLR196W SSM4P40318 1319 aa6.64□□□□□ -1.35
PWP1YLR196W HSP82P02829 709 aaKnown RBP6.64□□□□□ -1.35
PWP1YLR196W SPT2P06843 333 aaPredicted RBP6.63□□□□□ -1.35
PWP1YLR196W SMC4Q12267 1418 aa6.63□□□□□ -1.35
PWP1YLR196W YCF1P39109 1515 aaKnown RBP6.62□□□□□ -1.35
PWP1YLR196W PDR15Q04182 1529 aaKnown RBP6.62□□□□□ -1.35
PWP1YLR196W ORC1P54784 914 aaPredicted RBP6.62□□□□□ -1.35
PWP1YLR196W HAA1Q12753 694 aaKnown RBP6.62□□□□□ -1.35
PWP1YLR196W TOP2P06786 1428 aaKnown RBP6.61□□□□□ -1.35
PWP1YLR196W MDS3P53094 1487 aa6.61□□□□□ -1.35
PWP1YLR196W ULS1Q08562 1619 aa6.61□□□□□ -1.35
PWP1YLR196W QCR6P00127 147 aa6.6□□□□□ -1.35
PWP1YLR196W ENP1P38333 483 aaKnown RBP6.6□□□□□ -1.35
PWP1YLR196W STH1P32597 1359 aa6.6□□□□□ -1.35
PWP1YLR196W YGR130CP53278 816 aa6.59□□□□□ -1.35
PWP1YLR196W FPR3P38911 411 aaKnown RBP6.59□□□□□ -1.36
PWP1YLR196W TIF4632P39936 914 aaKnown RBP6.58□□□□□ -1.36
PWP1YLR196W HIF1Q12373 385 aa6.58□□□□□ -1.36
PWP1YLR196W TY1B-HO13535 1793 aa6.57□□□□□ -1.36
PWP1YLR196W TY1B-DR5P0C2I2 1755 aa6.57□□□□□ -1.36
PWP1YLR196W TY1B-DR6P0C2I3 1755 aa6.57□□□□□ -1.36
PWP1YLR196W TY1B-LR2P0C2I5 1755 aa6.57□□□□□ -1.36
PWP1YLR196W TY1B-LR3P0C2I6 1755 aaKnown RBP6.57□□□□□ -1.36
PWP1YLR196W TY1B-PR1P0C2I9 1755 aaKnown RBP6.57□□□□□ -1.36
PWP1YLR196W TY1B-PR2P0C2J0 1756 aa6.57□□□□□ -1.36
PWP1YLR196W TY1B-PR3P0C2J1 1755 aaKnown RBP6.57□□□□□ -1.36
PWP1YLR196W TY1B-JR1P47098 1755 aa6.57□□□□□ -1.36
PWP1YLR196W TY1B-ML2Q03434 1755 aaKnown RBP6.57□□□□□ -1.36
PWP1YLR196W TY1B-ER1Q03612 1755 aa6.57□□□□□ -1.36
PWP1YLR196W TY1B-ML1Q04711 1755 aaKnown RBP6.57□□□□□ -1.36
PWP1YLR196W TY1B-GR2Q12269 1755 aa6.57□□□□□ -1.36
PWP1YLR196W TY1B-OLQ12273 1755 aa6.57□□□□□ -1.36
PWP1YLR196W TY1B-PLQ12414 1755 aaKnown RBP6.57□□□□□ -1.36
PWP1YLR196W RPN1P38764 993 aaKnown RBP6.57□□□□□ -1.36
PWP1YLR196W GEA1P47102 1408 aaPredicted RBP6.56□□□□□ -1.36
PWP1YLR196W MRPL32P25348 183 aa6.56□□□□□ -1.36
PWP1YLR196W TY3B-GQ99315 1547 aa6.54□□□□□ -1.36
PWP1YLR196W SPT21P35209 758 aa6.54□□□□□ -1.36
PWP1YLR196W FPR4Q06205 392 aaPredicted RBP6.54□□□□□ -1.36
PWP1YLR196W TY1B-BRQ12193 1756 aa6.54□□□□□ -1.36
PWP1YLR196W TY1B-GR3Q12316 1755 aa6.54□□□□□ -1.36
PWP1YLR196W TY1B-ORQ92393 1755 aa6.54□□□□□ -1.36
PWP1YLR196W PAN1P32521 1480 aa6.54□□□□□ -1.36
PWP1YLR196W RPS0AP32905 252 aaKnown RBP6.53□□□□□ -1.36
PWP1YLR196W RIX1P38883 763 aaPredicted RBP6.53□□□□□ -1.36
PWP1YLR196W GIN4Q12263 1142 aa6.53□□□□□ -1.36
PWP1YLR196W TSC11P40061 1430 aa6.53□□□□□ -1.36
PWP1YLR196W PDR10P51533 1564 aa6.52□□□□□ -1.37
PWP1YLR196W YBT1P32386 1661 aa6.52□□□□□ -1.37
PWP1YLR196W TOA1P32773 286 aa6.52□□□□□ -1.37
PWP1YLR196W YCK3P39962 524 aa6.51□□□□□ -1.37
PWP1YLR196W TLG1Q03322 224 aa6.51□□□□□ -1.37
PWP1YLR196W NHA1Q99271 985 aa6.51□□□□□ -1.37
PWP1YLR196W FUN12P39730 1002 aaKnown RBP6.5□□□□□ -1.37
PWP1YLR196W YNL011CP53980 444 aa6.5□□□□□ -1.37
PWP1YLR196W RNA1P11745 407 aaKnown RBP6.49□□□□□ -1.37
PWP1YLR196W SPC110P32380 944 aa6.49□□□□□ -1.37
PWP1YLR196W BRL1P38770 471 aa6.49□□□□□ -1.37
PWP1YLR196W PIL1P53252 339 aaKnown RBP6.49□□□□□ -1.37
PWP1YLR196W SPT16P32558 1035 aaKnown RBP6.48□□□□□ -1.37
PWP1YLR196W POL5P39985 1022 aaKnown RBP6.48□□□□□ -1.37
PWP1YLR196W ESC1Q03661 1658 aaKnown RBP6.48□□□□□ -1.37
PWP1YLR196W SEC3P33332 1336 aaKnown RBP6.48□□□□□ -1.37
PWP1YLR196W TY1B-JR2P47100 1755 aaKnown RBP6.48□□□□□ -1.37
PWP1YLR196W TY1B-ER2Q03619 1755 aa6.48□□□□□ -1.37
PWP1YLR196W TY1B-MR1Q04214 1755 aa6.48□□□□□ -1.37
PWP1YLR196W TY1B-MR2Q04670 1755 aaKnown RBP6.48□□□□□ -1.37
PWP1YLR196W TY1B-LR1Q12088 1755 aaKnown RBP6.48□□□□□ -1.37
PWP1YLR196W TY1B-NL1Q12112 1755 aa6.48□□□□□ -1.37
PWP1YLR196W TY1B-GR1Q12141 1755 aa6.48□□□□□ -1.37
PWP1YLR196W TY1B-BLQ12490 1755 aa6.48□□□□□ -1.37
PWP1YLR196W SWE1P32944 819 aa6.47□□□□□ -1.37
PWP1YLR196W VPS4P52917 437 aa6.47□□□□□ -1.37
PWP1YLR196W VTH1P40438 1549 aa6.46□□□□□ -1.37
PWP1YLR196W VTH2P40890 1549 aa6.46□□□□□ -1.37
PWP1YLR196W SSA1P10591 642 aaKnown RBP6.46□□□□□ -1.38
PWP1YLR196W SSA2P10592 639 aaKnown RBP6.46□□□□□ -1.38
PWP1YLR196W NMD2P38798 1089 aaKnown RBP6.46□□□□□ -1.38
PWP1YLR196W RTT106P40161 455 aa6.46□□□□□ -1.38
PWP1YLR196W SUB1P54000 292 aaKnown RBP6.46□□□□□ -1.38
PWP1YLR196W GRX3Q03835 250 aa6.46□□□□□ -1.38
PWP1YLR196W DNF1P32660 1571 aa6.45□□□□□ -1.38
PWP1YLR196W VPS15P22219 1454 aa6.45□□□□□ -1.38
PWP1YLR196W CLC1P17891 233 aa6.44□□□□□ -1.38
PWP1YLR196W MPP10P47083 593 aaKnown RBP6.42□□□□□ -1.38
PWP1YLR196W VPS72Q03388 795 aa6.42□□□□□ -1.38
PWP1YLR196W CDC25P04821 1589 aa6.4□□□□□ -1.39
PWP1YLR196W IRC20Q06554 1556 aa6.4□□□□□ -1.39
PWP1YLR196W SNT2P53127 1403 aa6.39□□□□□ -1.39
PWP1YLR196W BRN1P38170 754 aa6.39□□□□□ -1.39
PWP1YLR196W ETT1Q08421 412 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms