RNA–Protein interactions for RNA: YJL134W

LCB3, Transcript of Long-chain base-1-phosphate phosphatase, yeastyeast

Gene LCB3, Length 1,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB3YJL134W TAF7Q05021 590 aa9.3□□□□□ -0.92
LCB3YJL134W VTH1P40438 1549 aa9.29□□□□□ -0.92
LCB3YJL134W VTH2P40890 1549 aa9.29□□□□□ -0.92
LCB3YJL134W PDR15Q04182 1529 aaKnown RBP9.27□□□□□ -0.93
LCB3YJL134W TSC11P40061 1430 aa9.27□□□□□ -0.93
LCB3YJL134W NUP159P40477 1460 aa9.26□□□□□ -0.93
LCB3YJL134W DRS2P39524 1355 aa9.25□□□□□ -0.93
LCB3YJL134W ULS1Q08562 1619 aa9.23□□□□□ -0.93
LCB3YJL134W VPS15P22219 1454 aa9.23□□□□□ -0.93
LCB3YJL134W ABP1P15891 592 aaKnown RBP9.23□□□□□ -0.93
LCB3YJL134W MMS1Q06211 1407 aa9.22□□□□□ -0.93
LCB3YJL134W TY1B-JR2P47100 1755 aaKnown RBP9.19□□□□□ -0.94
LCB3YJL134W TY1B-ER2Q03619 1755 aa9.19□□□□□ -0.94
LCB3YJL134W TY1B-MR1Q04214 1755 aa9.19□□□□□ -0.94
LCB3YJL134W TY1B-MR2Q04670 1755 aaKnown RBP9.19□□□□□ -0.94
LCB3YJL134W TY1B-LR1Q12088 1755 aaKnown RBP9.19□□□□□ -0.94
LCB3YJL134W TY1B-NL1Q12112 1755 aa9.19□□□□□ -0.94
LCB3YJL134W TY1B-GR1Q12141 1755 aa9.19□□□□□ -0.94
LCB3YJL134W TY1B-BLQ12490 1755 aa9.19□□□□□ -0.94
LCB3YJL134W YRF1-1P0CX20 1796 aa9.18□□□□□ -0.94
LCB3YJL134W YRF1-5P0CX21 1796 aa9.18□□□□□ -0.94
LCB3YJL134W YRF1-8P0CX22 1796 aa9.18□□□□□ -0.94
LCB3YJL134W RPG1P38249 964 aaKnown RBP9.18□□□□□ -0.94
LCB3YJL134W NTE1Q04958 1679 aa9.18□□□□□ -0.94
LCB3YJL134W GEA1P47102 1408 aaPredicted RBP9.17□□□□□ -0.94
LCB3YJL134W IFH1P39520 1085 aa9.17□□□□□ -0.94
LCB3YJL134W SNT2P53127 1403 aa9.15□□□□□ -0.94
LCB3YJL134W IKI3Q06706 1349 aaKnown RBP9.15□□□□□ -0.94
LCB3YJL134W RPL17AP05740 184 aaKnown RBP9.15□□□□□ -0.94
LCB3YJL134W RPL17BP46990 184 aaKnown RBP9.15□□□□□ -0.94
LCB3YJL134W DMA1P38823 416 aa9.13□□□□□ -0.95
LCB3YJL134W YFR006WP43590 535 aa9.13□□□□□ -0.95
LCB3YJL134W RPO21P04050 1733 aaKnown RBP9.13□□□□□ -0.95
LCB3YJL134W IRC20Q06554 1556 aa9.1□□□□□ -0.95
LCB3YJL134W NUP170P38181 1502 aa9.1□□□□□ -0.95
LCB3YJL134W RTT106P40161 455 aa9.08□□□□□ -0.96
LCB3YJL134W TY3B-GQ99315 1547 aa9.07□□□□□ -0.96
LCB3YJL134W MET10P39692 1035 aa9.07□□□□□ -0.96
LCB3YJL134W YBT1P32386 1661 aa9.04□□□□□ -0.96
LCB3YJL134W DNF2Q12675 1612 aa9.03□□□□□ -0.96
LCB3YJL134W PDR12Q02785 1511 aa9.02□□□□□ -0.97
LCB3YJL134W CAT8P39113 1433 aa9.02□□□□□ -0.97
LCB3YJL134W SSM4P40318 1319 aa9.02□□□□□ -0.97
LCB3YJL134W TRM3Q07527 1436 aa8.99□□□□□ -0.97
LCB3YJL134W PRI1P10363 409 aa8.99□□□□□ -0.97
LCB3YJL134W REB1P21538 810 aa8.99□□□□□ -0.97
LCB3YJL134W SPO14P36126 1683 aa8.97□□□□□ -0.97
LCB3YJL134W PTP3P40048 928 aa8.97□□□□□ -0.97
LCB3YJL134W GDB1Q06625 1536 aa8.95□□□□□ -0.98
LCB3YJL134W PDR10P51533 1564 aa8.95□□□□□ -0.98
LCB3YJL134W BUD3P25558 1636 aa8.94□□□□□ -0.98
LCB3YJL134W ARO1P08566 1588 aaKnown RBP8.93□□□□□ -0.98
LCB3YJL134W IQG1Q12280 1495 aa8.92□□□□□ -0.98
LCB3YJL134W NUP157P40064 1391 aaKnown RBP8.91□□□□□ -0.98
LCB3YJL134W DOP1Q03921 1698 aa8.9□□□□□ -0.98
LCB3YJL134W SRB8P25648 1427 aa8.89□□□□□ -0.99
LCB3YJL134W RIM101P33400 625 aa8.89□□□□□ -0.99
LCB3YJL134W YOR093CQ12275 1648 aa8.87□□□□□ -0.99
LCB3YJL134W SPT21P35209 758 aa8.86□□□□□ -0.99
LCB3YJL134W CKB1P43639 278 aa8.85□□□□□ -0.99
LCB3YJL134W SSP1P38871 571 aa8.8□□□□□ -1
LCB3YJL134W PRY3P47033 881 aa8.79□□□□□ -1
LCB3YJL134W YSP2Q06681 1438 aa8.78□□□□□ -1
LCB3YJL134W GCN2P15442 1659 aa8.78□□□□□ -1
LCB3YJL134W AAD16Q02895 342 aa8.75□□□□□ -1.01
LCB3YJL134W BUD21Q08492 214 aaPredicted RBP8.75□□□□□ -1.01
LCB3YJL134W LEO1P38439 464 aa8.72□□□□□ -1.01
LCB3YJL134W BNR1P40450 1375 aa8.72□□□□□ -1.01
LCB3YJL134W CHC1P22137 1653 aaKnown RBP8.72□□□□□ -1.01
LCB3YJL134W YAP3P38749 330 aa8.69□□□□□ -1.02
LCB3YJL134W SEC7P11075 2009 aaKnown RBP8.68□□□□□ -1.02
LCB3YJL134W DNF3Q12674 1656 aa8.67□□□□□ -1.02
LCB3YJL134W URN1Q06525 465 aaKnown RBP8.66□□□□□ -1.02
LCB3YJL134W NOP7P53261 605 aaKnown RBP8.65□□□□□ -1.02
LCB3YJL134W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.64□□□□□ -1.03not detected
LCB3YJL134W PDR5P33302 1511 aaKnown RBP8.64□□□□□ -1.03
LCB3YJL134W PAF1P38351 445 aa8.62□□□□□ -1.03
LCB3YJL134W OXP1P28273 1286 aa8.61□□□□□ -1.03
LCB3YJL134W POL5P39985 1022 aaKnown RBP8.61□□□□□ -1.03
LCB3YJL134W MAK10Q02197 733 aa8.59□□□□□ -1.03
LCB3YJL134W HAP1P0CE41 1502 aa8.59□□□□□ -1.03
LCB3YJL134W VMR1P38735 1592 aa8.58□□□□□ -1.04
LCB3YJL134W NUP188P52593 1655 aaKnown RBP8.57□□□□□ -1.04
LCB3YJL134W YAH1Q12184 172 aaKnown RBP8.57□□□□□ -1.04
LCB3YJL134W IML1P47170 1584 aa8.56□□□□□ -1.04
LCB3YJL134W TSR3Q12094 313 aaKnown RBP8.55□□□□□ -1.04
LCB3YJL134W YIL055CP40523 627 aaKnown RBP8.54□□□□□ -1.04
LCB3YJL134W RAV1P47104 1357 aa8.53□□□□□ -1.04
LCB3YJL134W PDR11P40550 1411 aa8.5□□□□□ -1.05
LCB3YJL134W YMR196WQ04336 1088 aa8.49□□□□□ -1.05
LCB3YJL134W YLR271WQ06152 274 aa8.49□□□□□ -1.05
LCB3YJL134W RTC1Q08281 1341 aa8.49□□□□□ -1.05
LCB3YJL134W LEU3P08638 886 aa8.47□□□□□ -1.05
LCB3YJL134W SEC3P33332 1336 aaKnown RBP8.45□□□□□ -1.06
LCB3YJL134W TY1B-NL2Q99337 1749 aaKnown RBP8.44□□□□□ -1.06
LCB3YJL134W IPL1P38991 367 aa8.44□□□□□ -1.06
LCB3YJL134W MGA2P40578 1113 aa8.44□□□□□ -1.06
LCB3YJL134W TY3B-IQ7LHG5 1498 aaKnown RBP8.44□□□□□ -1.06
LCB3YJL134W MHP1P43638 1398 aa8.43□□□□□ -1.06
LCB3YJL134W NUP192P47054 1683 aa8.41□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms